RNA–Protein interactions for RNA: ENST00000239690.8

NUDCD1-201, Transcript of NudC domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUDCD1, Length 4,217 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD1-201ENST00000239690 ADARP55265 1226 aaKnown RBP10.05□□□□□ -0.8
NUDCD1-201ENST00000239690 MRPS9P82933 396 aaKnown RBP10.05□□□□□ -0.8
NUDCD1-201ENST00000239690 BNIP1Q12981 228 aa10.05□□□□□ -0.8
NUDCD1-201ENST00000239690 ZYXQ15942 572 aaKnown RBP10.05□□□□□ -0.8
NUDCD1-201ENST00000239690 ENOSF1Q7L5Y1 443 aa10.05□□□□□ -0.8
NUDCD1-201ENST00000239690 GALNT15Q8N3T1 639 aa10.05□□□□□ -0.8
NUDCD1-201ENST00000239690 NEDD1Q8NHV4 660 aa10.05□□□□□ -0.8
NUDCD1-201ENST00000239690 SH3RF3Q8TEJ3 882 aaPredicted RBP10.05□□□□□ -0.8
NUDCD1-201ENST00000239690 ATG4AQ8WYN0 398 aa10.05□□□□□ -0.8
NUDCD1-201ENST00000239690 EBF2Q9HAK2 575 aa10.05□□□□□ -0.8
NUDCD1-201ENST00000239690 SSX2IPQ9Y2D8 614 aa10.05□□□□□ -0.8
NUDCD1-201ENST00000239690 ZHX2Q9Y6X8 837 aa10.05□□□□□ -0.8
NUDCD1-201ENST00000239690 TTC36A6NLP5 189 aa10.05□□□□□ -0.8
NUDCD1-201ENST00000239690 PI4K2BG5E9Z4 385 aa10.05□□□□□ -0.8
NUDCD1-201ENST00000239690 KIAA0391O15091 583 aaKnown RBP10.05□□□□□ -0.8
NUDCD1-201ENST00000239690 SLC26A4O43511 780 aa10.05□□□□□ -0.8
NUDCD1-201ENST00000239690 SMNDC1O75940 238 aaKnown RBP eCLIP10.05□□□□□ -0.8
NUDCD1-201ENST00000239690 RTN3O95197 1032 aaPredicted RBP10.05□□□□□ -0.8
NUDCD1-201ENST00000239690 HSPA13P48723 471 aa10.05□□□□□ -0.8
NUDCD1-201ENST00000239690 COPAP53621 1224 aa10.05□□□□□ -0.8
NUDCD1-201ENST00000239690 UBXN2AP68543 259 aa10.05□□□□□ -0.8
NUDCD1-201ENST00000239690 GTF2IP78347 998 aa10.05□□□□□ -0.8
NUDCD1-201ENST00000239690 ZNF200P98182 395 aaPredicted RBP10.05□□□□□ -0.8
NUDCD1-201ENST00000239690 SBK1Q52WX2 424 aa10.05□□□□□ -0.8
NUDCD1-201ENST00000239690 C12orf60Q5U649 245 aa10.05□□□□□ -0.8
NUDCD1-201ENST00000239690 TRIM72Q6ZMU5 477 aa10.05□□□□□ -0.8
NUDCD1-201ENST00000239690 APTXQ7Z2E3 356 aaKnown RBP10.05□□□□□ -0.8
NUDCD1-201ENST00000239690 TRIM50Q86XT4 487 aa10.05□□□□□ -0.8
NUDCD1-201ENST00000239690 CPXCR1Q8N123 301 aa10.05□□□□□ -0.8
NUDCD1-201ENST00000239690 GALNT4Q8N4A0 578 aa10.05□□□□□ -0.8
NUDCD1-201ENST00000239690 TMEM35BQ8NCS4 154 aa10.05□□□□□ -0.8
NUDCD1-201ENST00000239690 DDHD1Q8NEL9 900 aa10.05□□□□□ -0.8
NUDCD1-201ENST00000239690 FAM118BQ9BPY3 351 aa10.05□□□□□ -0.8
NUDCD1-201ENST00000239690 APOL6Q9BWW8 343 aa10.05□□□□□ -0.8
NUDCD1-201ENST00000239690 PFDN4Q9NQP4 134 aa10.05□□□□□ -0.8
NUDCD1-201ENST00000239690 CHORDC1Q9UHD1 332 aaPredicted RBP10.05□□□□□ -0.8
NUDCD1-201ENST00000239690 MROH2AA6NES4 1674 aa10.05□□□□□ -0.8
NUDCD1-201ENST00000239690 PPLO60437 1756 aa10.05□□□□□ -0.8
NUDCD1-201ENST00000239690 A8MUI8 341 aa10.05□□□□□ -0.8
NUDCD1-201ENST00000239690 XPO1O14980 1071 aaKnown RBP10.05□□□□□ -0.8
NUDCD1-201ENST00000239690 KLRC4O43908 158 aa10.05□□□□□ -0.8
NUDCD1-201ENST00000239690 EXOC3L1Q86VI1 746 aa10.05□□□□□ -0.8
NUDCD1-201ENST00000239690 RNF169Q8NCN4 708 aa10.05□□□□□ -0.8
NUDCD1-201ENST00000239690 WDR60Q8WVS4 1066 aa10.05□□□□□ -0.8
NUDCD1-201ENST00000239690 CNKSR1Q969H4 720 aa10.05□□□□□ -0.8
NUDCD1-201ENST00000239690 FAM111AQ96PZ2 611 aa10.05□□□□□ -0.8
NUDCD1-201ENST00000239690 TMEM120AQ9BXJ8 343 aa10.05□□□□□ -0.8
NUDCD1-201ENST00000239690 ZBED4O75132 1171 aa10.04□□□□□ -0.8
NUDCD1-201ENST00000239690 CALB1P05937 261 aa10.04□□□□□ -0.8
NUDCD1-201ENST00000239690 TMEM191BP0C7N4 346 aa10.04□□□□□ -0.8
NUDCD1-201ENST00000239690 P4HA1P13674 534 aa10.04□□□□□ -0.8
NUDCD1-201ENST00000239690 DCTN2Q13561 401 aaKnown RBP10.04□□□□□ -0.8
NUDCD1-201ENST00000239690 RRP1BQ14684 758 aaKnown RBP10.04□□□□□ -0.8
NUDCD1-201ENST00000239690 KIF22Q14807 665 aa10.04□□□□□ -0.8
NUDCD1-201ENST00000239690 DUPD1Q68J44 220 aa10.04□□□□□ -0.8
NUDCD1-201ENST00000239690 SPOPLQ6IQ16 392 aa10.04□□□□□ -0.8
NUDCD1-201ENST00000239690 C11orf63Q6NUN7 778 aa10.04□□□□□ -0.8
NUDCD1-201ENST00000239690 ZNF354CQ86Y25 554 aa10.04□□□□□ -0.8
NUDCD1-201ENST00000239690 MCF2L2Q86YR7 1114 aa10.04□□□□□ -0.8
NUDCD1-201ENST00000239690 RCOR2Q8IZ40 523 aa10.04□□□□□ -0.8
NUDCD1-201ENST00000239690 JADE3Q92613 823 aa10.04□□□□□ -0.8
NUDCD1-201ENST00000239690 TRIM15Q9C019 465 aa10.04□□□□□ -0.8
NUDCD1-201ENST00000239690 TMEM117Q9H0C3 514 aa10.04□□□□□ -0.8
NUDCD1-201ENST00000239690 ING2Q9H160 280 aa10.04□□□□□ -0.8
NUDCD1-201ENST00000239690 DDX56Q9NY93 547 aaKnown RBP10.04□□□□□ -0.8
NUDCD1-201ENST00000239690 SLC24A2Q9UI40 661 aa10.04□□□□□ -0.8
NUDCD1-201ENST00000239690 A6NJR5 290 aa10.04□□□□□ -0.8
NUDCD1-201ENST00000239690 ZBBXA8MT70 800 aa10.04□□□□□ -0.8
NUDCD1-201ENST00000239690 MAN1A2O60476 641 aa10.04□□□□□ -0.8
NUDCD1-201ENST00000239690 KRT7P08729 469 aa10.04□□□□□ -0.8
NUDCD1-201ENST00000239690 RALAP11233 206 aa10.04□□□□□ -0.8
NUDCD1-201ENST00000239690 PEX3P56589 373 aa10.04□□□□□ -0.8
NUDCD1-201ENST00000239690 PPIDQ08752 370 aaKnown RBP10.04□□□□□ -0.8
NUDCD1-201ENST00000239690 EFHC1Q5JVL4 640 aa10.04□□□□□ -0.8
NUDCD1-201ENST00000239690 RNF220Q5VTB9 566 aa10.04□□□□□ -0.8
NUDCD1-201ENST00000239690 MARK2Q7KZI7 788 aaKnown RBP10.04□□□□□ -0.8
NUDCD1-201ENST00000239690 ZNF572Q7Z3I7 529 aaPredicted RBP10.04□□□□□ -0.8
NUDCD1-201ENST00000239690 FBXL13Q8NEE6 735 aa10.04□□□□□ -0.8
NUDCD1-201ENST00000239690 CNBD2Q96M20 576 aa10.04□□□□□ -0.8
NUDCD1-201ENST00000239690 NR1H4Q96RI1 486 aaPredicted RBP10.04□□□□□ -0.8
NUDCD1-201ENST00000239690 MED15Q96RN5 788 aa10.04□□□□□ -0.8
NUDCD1-201ENST00000239690 VPS11Q9H270 941 aa10.04□□□□□ -0.8
NUDCD1-201ENST00000239690 DDX18Q9NVP1 670 aaKnown RBP10.04□□□□□ -0.8
NUDCD1-201ENST00000239690 ZNF219Q9P2Y4 722 aaPredicted RBP10.04□□□□□ -0.8
NUDCD1-201ENST00000239690 FLT1P17948 1338 aa10.04□□□□□ -0.8
NUDCD1-201ENST00000239690 LOC100653049A0A140TA62 436 aa10.04□□□□□ -0.8
NUDCD1-201ENST00000239690 ESYT2A0FGR8 921 aa10.04□□□□□ -0.8
NUDCD1-201ENST00000239690 BTNL10A8MVZ5 291 aa10.04□□□□□ -0.8
NUDCD1-201ENST00000239690 DCDC2CA8MYV0 355 aa10.04□□□□□ -0.8
NUDCD1-201ENST00000239690 KRT34O76011 436 aa10.04□□□□□ -0.8
NUDCD1-201ENST00000239690 SP100P23497 879 aaPredicted RBP10.04□□□□□ -0.8
NUDCD1-201ENST00000239690 MAP4P27816 1152 aaKnown RBP10.04□□□□□ -0.8
NUDCD1-201ENST00000239690 FLT3P36888 993 aa10.04□□□□□ -0.8
NUDCD1-201ENST00000239690 Q4G0T1 1027 aa10.04□□□□□ -0.8
NUDCD1-201ENST00000239690 FAM13CQ8NE31 585 aa10.04□□□□□ -0.8
NUDCD1-201ENST00000239690 OLFML3Q9NRN5 406 aa10.04□□□□□ -0.8
NUDCD1-201ENST00000239690 BTG4Q9NY30 223 aa10.04□□□□□ -0.8
NUDCD1-201ENST00000239690 TAGLN3Q9UI15 199 aa10.04□□□□□ -0.8
NUDCD1-201ENST00000239690 SMIM31A0A1B0GVY4 71 aa10.03□□□□□ -0.8
NUDCD1-201ENST00000239690 DDX3XO00571 662 aaKnown RBP eCLIP10.03□□□□□ -0.81e-9■□□□□ 9.1
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms