RNA–Protein interactions for RNA: ENST00000239666.8

PDZD11-201, Transcript of PDZ domain containing 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDZD11, Length 1,043 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD11-201ENST00000239666 NT5DC1Q5TFE4 455 aa13.93□□□□□ -0.18
PDZD11-201ENST00000239666 CEP57Q86XR8 500 aa13.93□□□□□ -0.18
PDZD11-201ENST00000239666 C12orf76Q8N812 135 aaPredicted RBP13.93□□□□□ -0.18
PDZD11-201ENST00000239666 SMG7Q92540 1137 aaKnown RBP13.93□□□□□ -0.18
PDZD11-201ENST00000239666 MMTAG2Q9BU76 263 aaKnown RBP13.93□□□□□ -0.18
PDZD11-201ENST00000239666 PRKD2Q9BZL6 878 aa13.93□□□□□ -0.18
PDZD11-201ENST00000239666 PTPRHQ9HD43 1115 aa13.93□□□□□ -0.18
PDZD11-201ENST00000239666 MAFFQ9ULX9 164 aa13.93□□□□□ -0.18
PDZD11-201ENST00000239666 MYO10Q9HD67 2058 aa13.92□□□□□ -0.18
PDZD11-201ENST00000239666 SMIM28A0A1B0GU29 152 aa13.92□□□□□ -0.18
PDZD11-201ENST00000239666 ARHGEF37A1IGU5 675 aa13.92□□□□□ -0.18
PDZD11-201ENST00000239666 CASTOR2A6NHX0 329 aa13.92□□□□□ -0.18
PDZD11-201ENST00000239666 H7C4K7 107 aa13.92□□□□□ -0.18
PDZD11-201ENST00000239666 PTGESO14684 152 aa13.92□□□□□ -0.18
PDZD11-201ENST00000239666 TGM5O43548 720 aa13.92□□□□□ -0.18
PDZD11-201ENST00000239666 POU2F2P09086 479 aa13.92□□□□□ -0.18
PDZD11-201ENST00000239666 KCNE1P15382 129 aa13.92□□□□□ -0.18
PDZD11-201ENST00000239666 CDC25AP30304 524 aa13.92□□□□□ -0.18
PDZD11-201ENST00000239666 SLC12A3P55017 1021 aa13.92□□□□□ -0.18
PDZD11-201ENST00000239666 PSMD5Q16401 504 aa13.92□□□□□ -0.18
PDZD11-201ENST00000239666 IL17AQ16552 155 aa13.92□□□□□ -0.18
PDZD11-201ENST00000239666 XKR4Q5GH76 650 aa13.92□□□□□ -0.18
PDZD11-201ENST00000239666 LILRA6Q6PI73 481 aa13.92□□□□□ -0.18
PDZD11-201ENST00000239666 TAS1R1Q7RTX1 841 aa13.92□□□□□ -0.18
PDZD11-201ENST00000239666 PALB2Q86YC2 1186 aa13.92□□□□□ -0.18
PDZD11-201ENST00000239666 CD302Q8IX05 232 aa13.92□□□□□ -0.18
PDZD11-201ENST00000239666 PPP1R10Q96QC0 940 aaKnown RBP13.92□□□□□ -0.18
PDZD11-201ENST00000239666 ZSCAN16Q9H4T2 348 aaPredicted RBP13.92□□□□□ -0.18
PDZD11-201ENST00000239666 LIMD1Q9UGP4 676 aa13.92□□□□□ -0.18
PDZD11-201ENST00000239666 BACE2Q9Y5Z0 518 aa13.92□□□□□ -0.18
PDZD11-201ENST00000239666 PP2D1A8MPX8 630 aa13.91□□□□□ -0.18
PDZD11-201ENST00000239666 SYN3O14994 580 aa13.91□□□□□ -0.18
PDZD11-201ENST00000239666 SPTLC1O15269 473 aa13.91□□□□□ -0.18
PDZD11-201ENST00000239666 SLC16A4O15374 487 aa13.91□□□□□ -0.18
PDZD11-201ENST00000239666 FAM13AO94988 1023 aa13.91□□□□□ -0.18
PDZD11-201ENST00000239666 PROZP22891 400 aa13.91□□□□□ -0.18
PDZD11-201ENST00000239666 MATR3P43243 847 aaKnown RBP eCLIP13.91□□□□□ -0.18
PDZD11-201ENST00000239666 RAB33AQ14088 237 aa13.91□□□□□ -0.18
PDZD11-201ENST00000239666 NOLC1Q14978 699 aaKnown RBP eCLIP13.91□□□□□ -0.18
PDZD11-201ENST00000239666 UPP1Q16831 310 aa13.91□□□□□ -0.18
PDZD11-201ENST00000239666 TMEM119Q4V9L6 283 aa13.91□□□□□ -0.18
PDZD11-201ENST00000239666 PPM1LQ5SGD2 360 aa13.91□□□□□ -0.18
PDZD11-201ENST00000239666 ALKAL1Q6UXT8 129 aa13.91□□□□□ -0.18
PDZD11-201ENST00000239666 TMEM161BQ8NDZ6 487 aa13.91□□□□□ -0.18
PDZD11-201ENST00000239666 APPL2Q8NEU8 664 aa13.91□□□□□ -0.18
PDZD11-201ENST00000239666 LNX1Q8TBB1 728 aaPredicted RBP13.91□□□□□ -0.18
PDZD11-201ENST00000239666 BICD1Q96G01 975 aa13.91□□□□□ -0.18
PDZD11-201ENST00000239666 KIFC3Q9BVG8 833 aa13.91□□□□□ -0.18
PDZD11-201ENST00000239666 RUSC1Q9BVN2 902 aa13.91□□□□□ -0.18
PDZD11-201ENST00000239666 TARS2Q9BW92 718 aaKnown RBP13.91□□□□□ -0.18
PDZD11-201ENST00000239666 CCSER1Q9C0I3 900 aa13.91□□□□□ -0.18
PDZD11-201ENST00000239666 CDT1Q9H211 546 aa13.91□□□□□ -0.18
PDZD11-201ENST00000239666 MFSD1Q9H3U5 465 aa13.91□□□□□ -0.18
PDZD11-201ENST00000239666 PARVGQ9HBI0 331 aa13.91□□□□□ -0.18
PDZD11-201ENST00000239666 NUB1Q9Y5A7 615 aa13.91□□□□□ -0.18
PDZD11-201ENST00000239666 CITO14578 2027 aa13.91□□□□□ -0.18
PDZD11-201ENST00000239666 CLUHO75153 1309 aa13.9□□□□□ -0.18
PDZD11-201ENST00000239666 VPS37CA5D8V6 355 aaPredicted RBP13.9□□□□□ -0.18
PDZD11-201ENST00000239666 TBCAO75347 108 aaKnown RBP13.9□□□□□ -0.18
PDZD11-201ENST00000239666 KIF4AO95239 1232 aa13.9□□□□□ -0.18
PDZD11-201ENST00000239666 CLTAP09496 248 aa13.9□□□□□ -0.18
PDZD11-201ENST00000239666 MAPTP10636 758 aaKnown RBP13.9□□□□□ -0.18
PDZD11-201ENST00000239666 FGFR3P22607 806 aa13.9□□□□□ -0.18
PDZD11-201ENST00000239666 GBP2P32456 591 aaPredicted RBP13.9□□□□□ -0.18
PDZD11-201ENST00000239666 ELF1P32519 619 aa13.9□□□□□ -0.18
PDZD11-201ENST00000239666 DDIT3P35638 169 aa13.9□□□□□ -0.18
PDZD11-201ENST00000239666 LIG4P49917 911 aa13.9□□□□□ -0.18
PDZD11-201ENST00000239666 POU5F1Q01860 360 aaKnown RBP13.9□□□□□ -0.18
PDZD11-201ENST00000239666 NAB2Q15742 525 aa13.9□□□□□ -0.18
PDZD11-201ENST00000239666 EEF1DP3Q658K8 133 aa13.9□□□□□ -0.18
PDZD11-201ENST00000239666 SLFN12LQ6IEE8 588 aa13.9□□□□□ -0.18
PDZD11-201ENST00000239666 HAUS6Q7Z4H7 955 aa13.9□□□□□ -0.18
PDZD11-201ENST00000239666 DAW1Q8N136 415 aa13.9□□□□□ -0.18
PDZD11-201ENST00000239666 MYCT1Q8N699 235 aa13.9□□□□□ -0.18
PDZD11-201ENST00000239666 ASIC4Q96FT7 647 aa13.9□□□□□ -0.18
PDZD11-201ENST00000239666 LRRC27Q9C0I9 530 aa13.9□□□□□ -0.18
PDZD11-201ENST00000239666 CNTN3Q9P232 1028 aa13.9□□□□□ -0.18
PDZD11-201ENST00000239666 EPS15L1Q9UBC2 864 aa13.9□□□□□ -0.18
PDZD11-201ENST00000239666 STK17AQ9UEE5 414 aa13.9□□□□□ -0.18
PDZD11-201ENST00000239666 MORC2Q9Y6X9 1032 aaPredicted RBP13.9□□□□□ -0.18
PDZD11-201ENST00000239666 TECTAO75443 2155 aa13.9□□□□□ -0.18
PDZD11-201ENST00000239666 SFI1A8K8P3 1242 aa13.89□□□□□ -0.19
PDZD11-201ENST00000239666 TRAK2O60296 914 aa13.89□□□□□ -0.19
PDZD11-201ENST00000239666 CYP3A5P20815 502 aa13.89□□□□□ -0.19
PDZD11-201ENST00000239666 SP100P23497 879 aaPredicted RBP13.89□□□□□ -0.19
PDZD11-201ENST00000239666 MARCKSP29966 332 aaPredicted RBP13.89□□□□□ -0.19
PDZD11-201ENST00000239666 CLCN5P51795 746 aa13.89□□□□□ -0.19
PDZD11-201ENST00000239666 CLCNKBP51801 687 aa13.89□□□□□ -0.19
PDZD11-201ENST00000239666 NCKAP1LP55160 1127 aa13.89□□□□□ -0.19
PDZD11-201ENST00000239666 MCL1Q07820 350 aa13.89□□□□□ -0.19
PDZD11-201ENST00000239666 MAPK7Q13164 816 aa13.89□□□□□ -0.19
PDZD11-201ENST00000239666 SF3A1Q15459 793 aaKnown RBP13.89□□□□□ -0.19
PDZD11-201ENST00000239666 RTP2Q5QGT7 225 aa13.89□□□□□ -0.19
PDZD11-201ENST00000239666 ZNF461Q8TAF7 563 aa13.89□□□□□ -0.19
PDZD11-201ENST00000239666 LARP4BQ92615 738 aaKnown RBP13.89□□□□□ -0.19
PDZD11-201ENST00000239666 SNX27Q96L92 541 aa13.89□□□□□ -0.19
PDZD11-201ENST00000239666 PNMA5Q96PV4 448 aa13.89□□□□□ -0.19
PDZD11-201ENST00000239666 CLSTN3Q9BQT9 956 aa13.89□□□□□ -0.19
PDZD11-201ENST00000239666 KCNK12Q9HB15 430 aa13.89□□□□□ -0.19
PDZD11-201ENST00000239666 MTRRQ9UBK8 725 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms