RNA–Protein interactions for RNA: ENST00000237289.8

TNFAIP3-201, Transcript of TNF alpha induced protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFAIP3, Length 4,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-201ENST00000237289 INTS2Q9H0H0 1204 aaKnown RBP11.97□□□□□ -0.49
TNFAIP3-201ENST00000237289 MTUS1Q9ULD2 1270 aa11.97□□□□□ -0.49
TNFAIP3-201ENST00000237289 ADRB2P07550 413 aa11.96□□□□□ -0.49
TNFAIP3-201ENST00000237289 ELF1P32519 619 aa11.96□□□□□ -0.49
TNFAIP3-201ENST00000237289 TSPY1Q01534 308 aa11.96□□□□□ -0.49
TNFAIP3-201ENST00000237289 ASIC2Q16515 512 aa11.96□□□□□ -0.49
TNFAIP3-201ENST00000237289 HESX1Q9UBX0 185 aa11.96□□□□□ -0.49
TNFAIP3-201ENST00000237289 SMIM28A0A1B0GU29 152 aa11.96□□□□□ -0.49
TNFAIP3-201ENST00000237289 TRIM43BA6NCK2 446 aa11.96□□□□□ -0.49
TNFAIP3-201ENST00000237289 AKR1B15C9JRZ8 316 aaPredicted RBP11.96□□□□□ -0.49
TNFAIP3-201ENST00000237289 KRT9P35527 623 aa11.96□□□□□ -0.49
TNFAIP3-201ENST00000237289 BPIFB4P59827 614 aa11.96□□□□□ -0.49
TNFAIP3-201ENST00000237289 MLLT1Q03111 559 aaPredicted RBP11.96□□□□□ -0.49
TNFAIP3-201ENST00000237289 PTK2Q05397 1052 aa11.96□□□□□ -0.49
TNFAIP3-201ENST00000237289 TRIM43Q96BQ3 446 aaPredicted RBP11.96□□□□□ -0.49
TNFAIP3-201ENST00000237289 ZSWIM8A7E2V4 1837 aa11.96□□□□□ -0.49
TNFAIP3-201ENST00000237289 ARL5CA6NH57 179 aa11.96□□□□□ -0.5
TNFAIP3-201ENST00000237289 NFICP08651 508 aa11.96□□□□□ -0.5
TNFAIP3-201ENST00000237289 HOXA11P31270 313 aaPredicted RBP11.96□□□□□ -0.5
TNFAIP3-201ENST00000237289 SMC1AQ14683 1233 aaKnown RBP11.96□□□□□ -0.5
TNFAIP3-201ENST00000237289 ZBTB41Q5SVQ8 909 aa11.96□□□□□ -0.5
TNFAIP3-201ENST00000237289 SFMBT2Q5VUG0 894 aa11.96□□□□□ -0.5
TNFAIP3-201ENST00000237289 EHBP1Q8NDI1 1231 aa11.96□□□□□ -0.5
TNFAIP3-201ENST00000237289 HASPINQ8TF76 798 aa11.96□□□□□ -0.5
TNFAIP3-201ENST00000237289 UROC1Q96N76 676 aa11.96□□□□□ -0.5
TNFAIP3-201ENST00000237289 NOX5Q96PH1 765 aa11.96□□□□□ -0.5
TNFAIP3-201ENST00000237289 INSL6Q9Y581 213 aa11.96□□□□□ -0.5
TNFAIP3-201ENST00000237289 LRRN2O75325 713 aa11.95□□□□□ -0.5
TNFAIP3-201ENST00000237289 MGAT3Q09327 533 aa11.95□□□□□ -0.5
TNFAIP3-201ENST00000237289 ELMSAN1Q6PJG2 1045 aa11.95□□□□□ -0.5
TNFAIP3-201ENST00000237289 LRRC55Q6ZSA7 311 aa11.95□□□□□ -0.5
TNFAIP3-201ENST00000237289 RSPH1Q8WYR4 309 aa11.95□□□□□ -0.5
TNFAIP3-201ENST00000237289 DERAQ9Y315 318 aa11.95□□□□□ -0.5
TNFAIP3-201ENST00000237289 TTLL13PA6NNM8 815 aa11.95□□□□□ -0.5
TNFAIP3-201ENST00000237289 LRRIQ3A6PVS8 624 aaPredicted RBP11.95□□□□□ -0.5
TNFAIP3-201ENST00000237289 PODXLO00592 558 aa11.95□□□□□ -0.5
TNFAIP3-201ENST00000237289 HOXC8P31273 242 aa11.95□□□□□ -0.5
TNFAIP3-201ENST00000237289 NOP14P78316 857 aaKnown RBP11.95□□□□□ -0.5
TNFAIP3-201ENST00000237289 TUSC3Q13454 348 aa11.95□□□□□ -0.5
TNFAIP3-201ENST00000237289 TRIM59Q8IWR1 403 aa11.95□□□□□ -0.5
TNFAIP3-201ENST00000237289 MFSD14AQ96MC6 490 aa11.95□□□□□ -0.5
TNFAIP3-201ENST00000237289 SLC9A7Q96T83 725 aa11.95□□□□□ -0.5
TNFAIP3-201ENST00000237289 RNF39Q9H2S5 420 aa11.95□□□□□ -0.5
TNFAIP3-201ENST00000237289 SLC28A3Q9HAS3 691 aa11.95□□□□□ -0.5
TNFAIP3-201ENST00000237289 DNAJC12Q9UKB3 198 aa11.95□□□□□ -0.5
TNFAIP3-201ENST00000237289 ZNF623O75123 536 aa11.95□□□□□ -0.5
TNFAIP3-201ENST00000237289 TNFAIP3P21580 790 aa11.95□□□□□ -0.5
TNFAIP3-201ENST00000237289 POU5F1Q01860 360 aaKnown RBP11.95□□□□□ -0.5
TNFAIP3-201ENST00000237289 TRIM71Q2Q1W2 868 aaKnown RBP11.95□□□□□ -0.5
TNFAIP3-201ENST00000237289 SLC10A6Q3KNW5 377 aa11.95□□□□□ -0.5
TNFAIP3-201ENST00000237289 HEXIM2Q96MH2 286 aaKnown RBP11.95□□□□□ -0.5
TNFAIP3-201ENST00000237289 A8MXQ7 604 aa11.95□□□□□ -0.5
TNFAIP3-201ENST00000237289 ODC1P11926 461 aa11.95□□□□□ -0.5
TNFAIP3-201ENST00000237289 ATICP31939 592 aa11.95□□□□□ -0.5
TNFAIP3-201ENST00000237289 RPL9P32969 192 aaKnown RBP11.95□□□□□ -0.5
TNFAIP3-201ENST00000237289 ZNF394Q53GI3 561 aa11.95□□□□□ -0.5
TNFAIP3-201ENST00000237289 SLC39A4Q6P5W5 647 aa11.95□□□□□ -0.5
TNFAIP3-201ENST00000237289 ENOSF1Q7L5Y1 443 aa11.95□□□□□ -0.5
TNFAIP3-201ENST00000237289 SNX27Q96L92 541 aa11.95□□□□□ -0.5
TNFAIP3-201ENST00000237289 CCDC42Q96M95 316 aa11.95□□□□□ -0.5
TNFAIP3-201ENST00000237289 LAG3P18627 525 aa11.94□□□□□ -0.5
TNFAIP3-201ENST00000237289 MSNP26038 577 aaKnown RBP11.94□□□□□ -0.5
TNFAIP3-201ENST00000237289 CTNNB1P35222 781 aa11.94□□□□□ -0.5
TNFAIP3-201ENST00000237289 GUCY2FP51841 1108 aa11.94□□□□□ -0.5
TNFAIP3-201ENST00000237289 KLHL30Q0D2K2 578 aa11.94□□□□□ -0.5
TNFAIP3-201ENST00000237289 ZCWPW2Q504Y3 356 aa11.94□□□□□ -0.5
TNFAIP3-201ENST00000237289 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.94□□□□□ -0.5
TNFAIP3-201ENST00000237289 PI4K2AQ9BTU6 479 aa11.94□□□□□ -0.5
TNFAIP3-201ENST00000237289 WNT8AQ9H1J5 351 aa11.94□□□□□ -0.5
TNFAIP3-201ENST00000237289 ELAC1Q9H777 363 aaKnown RBP11.94□□□□□ -0.5
TNFAIP3-201ENST00000237289 PPM1AP35813 382 aa11.94□□□□□ -0.5
TNFAIP3-201ENST00000237289 SNX16P57768 344 aa11.94□□□□□ -0.5
TNFAIP3-201ENST00000237289 AMHR2Q16671 573 aa11.94□□□□□ -0.5
TNFAIP3-201ENST00000237289 TMC7Q7Z402 723 aa11.94□□□□□ -0.5
TNFAIP3-201ENST00000237289 GPIHBP1Q8IV16 184 aa11.94□□□□□ -0.5
TNFAIP3-201ENST00000237289 TAF4BQ92750 862 aa11.94□□□□□ -0.5
TNFAIP3-201ENST00000237289 SLC35C1Q96A29 364 aa11.94□□□□□ -0.5
TNFAIP3-201ENST00000237289 MRFAP1L1Q96HT8 127 aa11.94□□□□□ -0.5
TNFAIP3-201ENST00000237289 DMAC2Q9NW81 257 aa11.94□□□□□ -0.5
TNFAIP3-201ENST00000237289 STYXL1Q9Y6J8 313 aa11.94□□□□□ -0.5
TNFAIP3-201ENST00000237289 CYB561D2O14569 222 aa11.94□□□□□ -0.5
TNFAIP3-201ENST00000237289 CPB1P15086 417 aa11.94□□□□□ -0.5
TNFAIP3-201ENST00000237289 PDE6CP51160 858 aa11.94□□□□□ -0.5
TNFAIP3-201ENST00000237289 MYL6P60660 151 aa11.94□□□□□ -0.5
TNFAIP3-201ENST00000237289 TAS1R2Q8TE23 839 aa11.94□□□□□ -0.5
TNFAIP3-201ENST00000237289 RABGGTAQ92696 567 aa11.94□□□□□ -0.5
TNFAIP3-201ENST00000237289 ARID3AQ99856 593 aa11.94□□□□□ -0.5
TNFAIP3-201ENST00000237289 NIF3L1Q9GZT8 377 aa11.94□□□□□ -0.5
TNFAIP3-201ENST00000237289 C2CD2LO14523 706 aa11.93□□□□□ -0.5
TNFAIP3-201ENST00000237289 URODP06132 367 aa11.93□□□□□ -0.5
TNFAIP3-201ENST00000237289 PTPN21Q16825 1174 aa11.93□□□□□ -0.5
TNFAIP3-201ENST00000237289 CDKAL1Q5VV42 579 aa11.93□□□□□ -0.5
TNFAIP3-201ENST00000237289 TMEM192Q8IY95 271 aa11.93□□□□□ -0.5
TNFAIP3-201ENST00000237289 TNIP3Q96KP6 325 aa11.93□□□□□ -0.5
TNFAIP3-201ENST00000237289 ATP8B3O60423 1300 aa11.93□□□□□ -0.5
TNFAIP3-201ENST00000237289 C9IYK1 514 aa11.93□□□□□ -0.5
TNFAIP3-201ENST00000237289 HOXD13P35453 343 aa11.93□□□□□ -0.5
TNFAIP3-201ENST00000237289 CYLC1P35663 651 aaPredicted RBP11.93□□□□□ -0.5
TNFAIP3-201ENST00000237289 DLG4P78352 724 aa11.93□□□□□ -0.5
TNFAIP3-201ENST00000237289 RBL2Q08999 1139 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms