RNA–Protein interactions for RNA: ENST00000235958.4

HMGCL-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 5

Gene HMGCL, Length 1,101 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-201ENST00000235958 CACNG4Q9UBN1 327 aa11□□□□□ -0.65
HMGCL-201ENST00000235958 MSRAQ9UJ68 235 aa11□□□□□ -0.65
HMGCL-201ENST00000235958 UBQLN1Q9UMX0 589 aaKnown RBP11□□□□□ -0.65
HMGCL-201ENST00000235958 FAN1Q9Y2M0 1017 aa11□□□□□ -0.65
HMGCL-201ENST00000235958 YBX2Q9Y2T7 364 aaKnown RBP11□□□□□ -0.65
HMGCL-201ENST00000235958 MRPL42Q9Y6G3 142 aaKnown RBP11□□□□□ -0.65
HMGCL-201ENST00000235958 PDCD11Q14690 1871 aaKnown RBP11□□□□□ -0.65
HMGCL-201ENST00000235958 SCN1AP35498 2009 aa10.99□□□□□ -0.65
HMGCL-201ENST00000235958 A0A1W2PPC1 479 aa10.99□□□□□ -0.65
HMGCL-201ENST00000235958 LINC01553A4QN01 128 aa10.99□□□□□ -0.65
HMGCL-201ENST00000235958 CASTOR2A6NHX0 329 aa10.99□□□□□ -0.65
HMGCL-201ENST00000235958 LRRC10BA6NIK2 292 aa10.99□□□□□ -0.65
HMGCL-201ENST00000235958 NRP1O14786 923 aa10.99□□□□□ -0.65
HMGCL-201ENST00000235958 ZC3H11AO75152 810 aaKnown RBP eCLIP10.99□□□□□ -0.65
HMGCL-201ENST00000235958 CST3P01034 146 aaPredicted RBP10.99□□□□□ -0.65
HMGCL-201ENST00000235958 TNNC2P02585 160 aa10.99□□□□□ -0.65
HMGCL-201ENST00000235958 ATP1A3P13637 1013 aa10.99□□□□□ -0.65
HMGCL-201ENST00000235958 ZNF18P17022 549 aa10.99□□□□□ -0.65
HMGCL-201ENST00000235958 IGFBP6P24592 240 aaPredicted RBP10.99□□□□□ -0.65
HMGCL-201ENST00000235958 GTF2H1P32780 548 aa10.99□□□□□ -0.65
HMGCL-201ENST00000235958 GCLMP48507 274 aa10.99□□□□□ -0.65
HMGCL-201ENST00000235958 CLCNKBP51801 687 aa10.99□□□□□ -0.65
HMGCL-201ENST00000235958 AP3M2P53677 418 aa10.99□□□□□ -0.65
HMGCL-201ENST00000235958 BCAR1P56945 870 aa10.99□□□□□ -0.65
HMGCL-201ENST00000235958 KCNH2Q12809 1159 aa10.99□□□□□ -0.65
HMGCL-201ENST00000235958 UPP1Q16831 310 aa10.99□□□□□ -0.65
HMGCL-201ENST00000235958 DCAF17Q5H9S7 520 aaPredicted RBP10.99□□□□□ -0.65
HMGCL-201ENST00000235958 DCLRE1AQ6PJP8 1040 aa10.99□□□□□ -0.65
HMGCL-201ENST00000235958 KCNT2Q6UVM3 1135 aa10.99□□□□□ -0.65
HMGCL-201ENST00000235958 SV2AQ7L0J3 742 aa10.99□□□□□ -0.65
HMGCL-201ENST00000235958 TRAPPC11Q7Z392 1133 aa10.99□□□□□ -0.65
HMGCL-201ENST00000235958 LRRC43Q8N309 656 aa10.99□□□□□ -0.65
HMGCL-201ENST00000235958 RNF214Q8ND24 703 aa10.99□□□□□ -0.65
HMGCL-201ENST00000235958 CLP1Q92989 425 aaKnown RBP10.99□□□□□ -0.65
HMGCL-201ENST00000235958 SLC35C1Q96A29 364 aa10.99□□□□□ -0.65
HMGCL-201ENST00000235958 DDX27Q96GQ7 796 aaKnown RBP10.99□□□□□ -0.65
HMGCL-201ENST00000235958 ANKRD36BP1Q96IX9 119 aa10.99□□□□□ -0.65
HMGCL-201ENST00000235958 PAAF1Q9BRP4 392 aa10.99□□□□□ -0.65
HMGCL-201ENST00000235958 TUBGCP2Q9BSJ2 902 aa10.99□□□□□ -0.65
HMGCL-201ENST00000235958 PBX4Q9BYU1 374 aa10.99□□□□□ -0.65
HMGCL-201ENST00000235958 MTMR12Q9C0I1 747 aa10.99□□□□□ -0.65
HMGCL-201ENST00000235958 MMRN2Q9H8L6 949 aa10.99□□□□□ -0.65
HMGCL-201ENST00000235958 TUBGCP4Q9UGJ1 667 aa10.99□□□□□ -0.65
HMGCL-201ENST00000235958 AGAP1Q9UPQ3 857 aa10.99□□□□□ -0.65
HMGCL-201ENST00000235958 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.99□□□□□ -0.65
HMGCL-201ENST00000235958 GBF1Q92538 1859 aa10.99□□□□□ -0.65
HMGCL-201ENST00000235958 COL4A6Q14031 1691 aa10.98□□□□□ -0.65
HMGCL-201ENST00000235958 ANO9A1A5B4 782 aa10.98□□□□□ -0.65
HMGCL-201ENST00000235958 NT5C1B-RDH14C9J2C7 533 aa10.98□□□□□ -0.65
HMGCL-201ENST00000235958 GOLGA6L19H0YKK7 550 aa10.98□□□□□ -0.65
HMGCL-201ENST00000235958 PIRO00625 290 aa10.98□□□□□ -0.65
HMGCL-201ENST00000235958 STX10O60499 249 aa10.98□□□□□ -0.65
HMGCL-201ENST00000235958 PHACTR2O75167 634 aa10.98□□□□□ -0.65
HMGCL-201ENST00000235958 ARHGEF15O94989 841 aa10.98□□□□□ -0.65
HMGCL-201ENST00000235958 CA3P07451 260 aa10.98□□□□□ -0.65
HMGCL-201ENST00000235958 TMEM191BP0C7N4 346 aa10.98□□□□□ -0.65
HMGCL-201ENST00000235958 LINC00271P0C7V0 271 aa10.98□□□□□ -0.65
HMGCL-201ENST00000235958 EEF1GP26641 437 aaKnown RBP10.98□□□□□ -0.65
HMGCL-201ENST00000235958 LRPAP1P30533 357 aa10.98□□□□□ -0.65
HMGCL-201ENST00000235958 BMPR1AP36894 532 aa10.98□□□□□ -0.65
HMGCL-201ENST00000235958 PBX3P40426 434 aa10.98□□□□□ -0.65
HMGCL-201ENST00000235958 OR1G1P47890 313 aa10.98□□□□□ -0.65
HMGCL-201ENST00000235958 SLC11A1P49279 550 aa10.98□□□□□ -0.65
HMGCL-201ENST00000235958 RBP5P82980 135 aa10.98□□□□□ -0.65
HMGCL-201ENST00000235958 SMAD3P84022 425 aaKnown RBP10.98□□□□□ -0.65
HMGCL-201ENST00000235958 TAP1Q03518 808 aa10.98□□□□□ -0.65
HMGCL-201ENST00000235958 KRT31Q15323 416 aa10.98□□□□□ -0.65
HMGCL-201ENST00000235958 LRIT3Q3SXY7 679 aa10.98□□□□□ -0.65
HMGCL-201ENST00000235958 ZACNQ401N2 412 aa10.98□□□□□ -0.65
HMGCL-201ENST00000235958 C9orf57Q5W0N0 161 aa10.98□□□□□ -0.65
HMGCL-201ENST00000235958 C15orf39Q6ZRI6 1047 aa10.98□□□□□ -0.65
HMGCL-201ENST00000235958 C1orf127Q8N9H9 656 aa10.98□□□□□ -0.65
HMGCL-201ENST00000235958 CXorf38Q8TB03 319 aa10.98□□□□□ -0.65
HMGCL-201ENST00000235958 TMEM175Q9BSA9 504 aa10.98□□□□□ -0.65
HMGCL-201ENST00000235958 COLEC11Q9BWP8 271 aa10.98□□□□□ -0.65
HMGCL-201ENST00000235958 RBSNQ9H1K0 784 aa10.98□□□□□ -0.65
HMGCL-201ENST00000235958 VPS16Q9H269 839 aa10.98□□□□□ -0.65
HMGCL-201ENST00000235958 AAASQ9NRG9 546 aa10.98□□□□□ -0.65
HMGCL-201ENST00000235958 LIMA1Q9UHB6 759 aaKnown RBP10.98□□□□□ -0.65
HMGCL-201ENST00000235958 SIX4Q9UIU6 781 aa10.98□□□□□ -0.65
HMGCL-201ENST00000235958 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.98□□□□□ -0.65
HMGCL-201ENST00000235958 MYO7AQ13402 2215 aa10.97□□□□□ -0.65
HMGCL-201ENST00000235958 F8W810 466 aa10.97□□□□□ -0.65
HMGCL-201ENST00000235958 TADA2AO75478 443 aa10.97□□□□□ -0.65
HMGCL-201ENST00000235958 B3GAT3O94766 335 aa10.97□□□□□ -0.65
HMGCL-201ENST00000235958 VNN1O95497 513 aa10.97□□□□□ -0.65
HMGCL-201ENST00000235958 AFPP02771 609 aaKnown RBP10.97□□□□□ -0.65
HMGCL-201ENST00000235958 ITGB3P05106 788 aa10.97□□□□□ -0.65
HMGCL-201ENST00000235958 KRT19P08727 400 aa10.97□□□□□ -0.65
HMGCL-201ENST00000235958 PRKCSHP14314 528 aaPredicted RBP10.97□□□□□ -0.65
HMGCL-201ENST00000235958 LAG3P18627 525 aa10.97□□□□□ -0.65
HMGCL-201ENST00000235958 FMO5P49326 533 aa10.97□□□□□ -0.65
HMGCL-201ENST00000235958 LILRA4P59901 499 aa10.97□□□□□ -0.65
HMGCL-201ENST00000235958 TPM4P67936 248 aa10.97□□□□□ -0.65
HMGCL-201ENST00000235958 BIRC3Q13489 604 aa10.97□□□□□ -0.65
HMGCL-201ENST00000235958 RAB30Q15771 203 aa10.97□□□□□ -0.65
HMGCL-201ENST00000235958 MAN2A1Q16706 1144 aa10.97□□□□□ -0.65
HMGCL-201ENST00000235958 CBWD6Q4V339 395 aa10.97□□□□□ -0.65
HMGCL-201ENST00000235958 VWA3BQ502W6 1294 aa10.97□□□□□ -0.65
HMGCL-201ENST00000235958 CBWD3Q5JTY5 395 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms