RNA–Protein interactions for RNA: ENST00000232888.6

RRP9-201, Transcript of ribosomal RNA processing 9, U3 small nucleolar RNA binding protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RRP9, Length 1,578 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRP9-201ENST00000232888 EPS8L1Q8TE68 723 aa25.56■■□□□ 1.68
RRP9-201ENST00000232888 U2AF1L4Q8WU68 220 aaKnown RBP25.56■■□□□ 1.68
RRP9-201ENST00000232888 CELF4Q9BZC1 486 aaKnown RBP25.56■■□□□ 1.68
RRP9-201ENST00000232888 CNTN6Q9UQ52 1028 aa25.56■■□□□ 1.68
RRP9-201ENST00000232888 A0A0A6YYK5 440 aaPredicted RBP25.56■■□□□ 1.68
RRP9-201ENST00000232888 CYP26A1O43174 497 aa25.56■■□□□ 1.68
RRP9-201ENST00000232888 IFI16Q16666 785 aaKnown RBP25.56■■□□□ 1.68
RRP9-201ENST00000232888 SLC10A6Q3KNW5 377 aa25.56■■□□□ 1.68
RRP9-201ENST00000232888 TMEM192Q8IY95 271 aa25.56■■□□□ 1.68
RRP9-201ENST00000232888 APOBEC3GQ9HC16 384 aaKnown RBP25.56■■□□□ 1.68
RRP9-201ENST00000232888 UTP3Q9NQZ2 479 aaKnown RBP eCLIP25.56■■□□□ 1.681e-7■■■■■ 115.4
RRP9-201ENST00000232888 NOCTQ9UK39 431 aaKnown RBP25.56■■□□□ 1.68
RRP9-201ENST00000232888 DERAQ9Y315 318 aa25.56■■□□□ 1.68
RRP9-201ENST00000232888 GZMAP12544 262 aa25.55■■□□□ 1.68
RRP9-201ENST00000232888 PDE6CP51160 858 aa25.55■■□□□ 1.68
RRP9-201ENST00000232888 MRPS6P82932 125 aaKnown RBP25.55■■□□□ 1.68
RRP9-201ENST00000232888 PTPN11Q06124 597 aaPredicted RBP25.55■■□□□ 1.68
RRP9-201ENST00000232888 SERINC5Q86VE9 423 aa25.55■■□□□ 1.68
RRP9-201ENST00000232888 ZNF677Q86XU0 584 aa25.55■■□□□ 1.68
RRP9-201ENST00000232888 PPP1R13LQ8WUF5 828 aa25.55■■□□□ 1.68
RRP9-201ENST00000232888 FAM84AQ96KN4 292 aa25.55■■□□□ 1.68
RRP9-201ENST00000232888 TSPAN18Q96SJ8 248 aa25.55■■□□□ 1.68
RRP9-201ENST00000232888 UQCRHLA0A096LP55 91 aa25.54■■□□□ 1.68
RRP9-201ENST00000232888 SLU7O95391 586 aaKnown RBP25.54■■□□□ 1.68
RRP9-201ENST00000232888 SGPL1O95470 568 aa25.54■■□□□ 1.68
RRP9-201ENST00000232888 CST3P01034 146 aaPredicted RBP25.54■■□□□ 1.68
RRP9-201ENST00000232888 UQCRHP07919 91 aa25.54■■□□□ 1.68
RRP9-201ENST00000232888 CYP11B1P15538 503 aa25.54■■□□□ 1.68
RRP9-201ENST00000232888 FGFR4P22455 802 aa25.54■■□□□ 1.68
RRP9-201ENST00000232888 JRKLQ9Y4A0 524 aa25.54■■□□□ 1.68
RRP9-201ENST00000232888 NUB1Q9Y5A7 615 aa25.54■■□□□ 1.68
RRP9-201ENST00000232888 PCDHB2Q9Y5E7 798 aa25.54■■□□□ 1.68
RRP9-201ENST00000232888 TRPV2Q9Y5S1 764 aa25.54■■□□□ 1.68
RRP9-201ENST00000232888 NPTXRO95502 500 aa25.53■■□□□ 1.68
RRP9-201ENST00000232888 KRT5P13647 590 aa25.53■■□□□ 1.68
RRP9-201ENST00000232888 ACO1P21399 889 aaKnown RBP25.53■■□□□ 1.68
RRP9-201ENST00000232888 ATICP31939 592 aa25.53■■□□□ 1.68
RRP9-201ENST00000232888 CDR2Q01850 454 aa25.53■■□□□ 1.68
RRP9-201ENST00000232888 GDF6Q6KF10 455 aaPredicted RBP25.53■■□□□ 1.68
RRP9-201ENST00000232888 NOP9Q86U38 636 aaKnown RBP25.53■■□□□ 1.68
RRP9-201ENST00000232888 RPUSD2Q8IZ73 545 aaKnown RBP25.53■■□□□ 1.68
RRP9-201ENST00000232888 CALR3Q96L12 384 aaKnown RBP25.53■■□□□ 1.68
RRP9-201ENST00000232888 TSEN34Q9BSV6 310 aaKnown RBP25.53■■□□□ 1.68
RRP9-201ENST00000232888 NIF3L1Q9GZT8 377 aa25.53■■□□□ 1.68
RRP9-201ENST00000232888 MRFAP1Q9Y605 127 aa25.53■■□□□ 1.68
RRP9-201ENST00000232888 TMEM253P0C7T8 217 aa25.52■■□□□ 1.68
RRP9-201ENST00000232888 YARSP54577 528 aaKnown RBP25.52■■□□□ 1.68
RRP9-201ENST00000232888 MYL6P60660 151 aa25.52■■□□□ 1.68
RRP9-201ENST00000232888 YWHAEP62258 255 aaKnown RBP25.52■■□□□ 1.68
RRP9-201ENST00000232888 TMEM132DQ14C87 1099 aa25.52■■□□□ 1.68
RRP9-201ENST00000232888 JADE1Q6IE81 842 aa25.52■■□□□ 1.68
RRP9-201ENST00000232888 SPOPLQ6IQ16 392 aa25.52■■□□□ 1.68
RRP9-201ENST00000232888 MOXD2PA6NHM9 499 aa25.52■■□□□ 1.68
RRP9-201ENST00000232888 CTIFO43310 598 aaKnown RBP25.52■■□□□ 1.68
RRP9-201ENST00000232888 NFICP08651 508 aa25.52■■□□□ 1.68
RRP9-201ENST00000232888 FAM47CQ5HY64 1035 aa25.52■■□□□ 1.68
RRP9-201ENST00000232888 PAPD7Q5XG87 772 aaKnown RBP25.52■■□□□ 1.68
RRP9-201ENST00000232888 SLC47A2Q86VL8 602 aa25.52■■□□□ 1.68
RRP9-201ENST00000232888 SLC20A1Q8WUM9 679 aa25.52■■□□□ 1.68
RRP9-201ENST00000232888 ZNF296Q8WUU4 475 aaPredicted RBP25.52■■□□□ 1.68
RRP9-201ENST00000232888 TMEM40Q8WWA1 233 aa25.52■■□□□ 1.68
RRP9-201ENST00000232888 PACSIN1Q9BY11 444 aa25.52■■□□□ 1.68
RRP9-201ENST00000232888 ISCUQ9H1K1 167 aa25.52■■□□□ 1.68
RRP9-201ENST00000232888 VRTNQ9H8Y1 702 aa25.52■■□□□ 1.68
RRP9-201ENST00000232888 CDC23Q9UJX2 597 aa25.52■■□□□ 1.68
RRP9-201ENST00000232888 ITGA11Q9UKX5 1188 aa25.52■■□□□ 1.68
RRP9-201ENST00000232888 ANKRD62A6NC57 917 aa25.51■■□□□ 1.67
RRP9-201ENST00000232888 MEFVO15553 781 aaPredicted RBP25.51■■□□□ 1.67
RRP9-201ENST00000232888 MOCS3O95396 460 aa25.51■■□□□ 1.67
RRP9-201ENST00000232888 CHRNB2P17787 502 aa25.51■■□□□ 1.67
RRP9-201ENST00000232888 ZNF699Q32M78 642 aa25.51■■□□□ 1.67
RRP9-201ENST00000232888 TRIM6Q9C030 488 aaPredicted RBP25.51■■□□□ 1.67
RRP9-201ENST00000232888 XYLT2Q9H1B5 865 aa25.51■■□□□ 1.67
RRP9-201ENST00000232888 FAM124BQ9H5Z6 455 aaPredicted RBP25.51■■□□□ 1.67
RRP9-201ENST00000232888 HMX1Q9NP08 348 aaPredicted RBP25.51■■□□□ 1.67
RRP9-201ENST00000232888 SEPT11Q9NVA2 429 aaKnown RBP25.51■■□□□ 1.67
RRP9-201ENST00000232888 PCDHGC5Q9Y5F6 944 aa25.51■■□□□ 1.67
RRP9-201ENST00000232888 RTN2O75298 545 aa25.5■■□□□ 1.67
RRP9-201ENST00000232888 STAU1O95793 577 aaKnown RBP25.5■■□□□ 1.67
RRP9-201ENST00000232888 INHAP05111 366 aa25.5■■□□□ 1.67
RRP9-201ENST00000232888 GALCP54803 685 aa25.5■■□□□ 1.67
RRP9-201ENST00000232888 NAP1L1P55209 391 aaKnown RBP25.5■■□□□ 1.67
RRP9-201ENST00000232888 UBR7Q8N806 425 aa25.5■■□□□ 1.67
RRP9-201ENST00000232888 C1orf127Q8N9H9 656 aa25.5■■□□□ 1.67
RRP9-201ENST00000232888 CTNNBL1Q8WYA6 563 aaPredicted RBP25.5■■□□□ 1.67
RRP9-201ENST00000232888 DDX1Q92499 740 aaKnown RBP25.5■■□□□ 1.67
RRP9-201ENST00000232888 ARID3AQ99856 593 aa25.5■■□□□ 1.67
RRP9-201ENST00000232888 SALL4Q9UJQ4 1053 aa25.5■■□□□ 1.67
RRP9-201ENST00000232888 TSKSQ9UJT2 592 aa25.5■■□□□ 1.67
RRP9-201ENST00000232888 PIN4Q9Y237 131 aaKnown RBP25.5■■□□□ 1.67
RRP9-201ENST00000232888 PCDHB4Q9Y5E5 795 aa25.5■■□□□ 1.67
RRP9-201ENST00000232888 CAPN6Q9Y6Q1 641 aa25.5■■□□□ 1.67
RRP9-201ENST00000232888 ANK1P16157 1881 aa25.49■■□□□ 1.67
RRP9-201ENST00000232888 AMPD2Q01433 879 aa25.49■■□□□ 1.67
RRP9-201ENST00000232888 SIX4Q9UIU6 781 aa25.49■■□□□ 1.67
RRP9-201ENST00000232888 CDY2AQ9Y6F7 541 aa25.49■■□□□ 1.67
RRP9-201ENST00000232888 NCANO14594 1321 aa25.49■■□□□ 1.67
RRP9-201ENST00000232888 DYNC1I1O14576 645 aa25.48■■□□□ 1.67
RRP9-201ENST00000232888 CLSTN1O94985 981 aa25.48■■□□□ 1.67
RRP9-201ENST00000232888 PRLRP16471 622 aa25.48■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms