RNA–Protein interactions for RNA: ENST00000230538.11

LAMA4-201, Transcript of laminin subunit alpha 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LAMA4, Length 6,547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA4-201ENST00000230538 CCZ1P86791 482 aaPredicted RBP12.15□□□□□ -0.47
LAMA4-201ENST00000230538 MTMR2Q13614 643 aa12.15□□□□□ -0.47
LAMA4-201ENST00000230538 GTF2H3Q13889 308 aa12.15□□□□□ -0.47
LAMA4-201ENST00000230538 SPDYAQ5MJ70 313 aa12.15□□□□□ -0.47
LAMA4-201ENST00000230538 FAM84BQ96KN1 310 aaPredicted RBP12.15□□□□□ -0.47
LAMA4-201ENST00000230538 AGTP01019 485 aa12.14□□□□□ -0.47
LAMA4-201ENST00000230538 EXOSC10Q01780 885 aaKnown RBP12.14□□□□□ -0.47
LAMA4-201ENST00000230538 SP8Q8IXZ3 490 aa12.14□□□□□ -0.47
LAMA4-201ENST00000230538 ZNF555Q8NEP9 628 aa12.14□□□□□ -0.47
LAMA4-201ENST00000230538 ALKQ9UM73 1620 aa12.14□□□□□ -0.47
LAMA4-201ENST00000230538 RGS7P49802 495 aa12.14□□□□□ -0.47
LAMA4-201ENST00000230538 HMGCS2P54868 508 aa12.14□□□□□ -0.47
LAMA4-201ENST00000230538 ATPAF2Q8N5M1 289 aa12.14□□□□□ -0.47
LAMA4-201ENST00000230538 PHF20Q9BVI0 1012 aa12.14□□□□□ -0.47
LAMA4-201ENST00000230538 IRX2Q9BZI1 471 aaPredicted RBP12.14□□□□□ -0.47
LAMA4-201ENST00000230538 PCDHB8Q9UN66 801 aa12.14□□□□□ -0.47
LAMA4-201ENST00000230538 SMG5Q9UPR3 1016 aaKnown RBP12.14□□□□□ -0.47
LAMA4-201ENST00000230538 SUPT3HO75486 399 aa12.14□□□□□ -0.47
LAMA4-201ENST00000230538 APRTP07741 180 aa12.14□□□□□ -0.47
LAMA4-201ENST00000230538 RBP5P82980 135 aa12.14□□□□□ -0.47
LAMA4-201ENST00000230538 DMC1Q14565 340 aa12.14□□□□□ -0.47
LAMA4-201ENST00000230538 LONRF1Q17RB8 773 aa12.14□□□□□ -0.47
LAMA4-201ENST00000230538 BRINP3Q76B58 766 aa12.14□□□□□ -0.47
LAMA4-201ENST00000230538 TMCO5AQ8N6Q1 288 aa12.14□□□□□ -0.47
LAMA4-201ENST00000230538 ISCA1Q9BUE6 129 aa12.14□□□□□ -0.47
LAMA4-201ENST00000230538 ADNPQ9H2P0 1102 aa12.14□□□□□ -0.47
LAMA4-201ENST00000230538 ASMTLO95671 621 aa12.14□□□□□ -0.47
LAMA4-201ENST00000230538 CHN1P15882 459 aa12.14□□□□□ -0.47
LAMA4-201ENST00000230538 ACOT2P49753 483 aa12.14□□□□□ -0.47
LAMA4-201ENST00000230538 KLK7P49862 253 aa12.14□□□□□ -0.47
LAMA4-201ENST00000230538 TMEM132DQ14C87 1099 aa12.14□□□□□ -0.47
LAMA4-201ENST00000230538 PKN3Q6P5Z2 889 aa12.14□□□□□ -0.47
LAMA4-201ENST00000230538 ARHGAP18Q8N392 663 aa12.14□□□□□ -0.47
LAMA4-201ENST00000230538 TBC1D19Q8N5T2 526 aa12.14□□□□□ -0.47
LAMA4-201ENST00000230538 USP33Q8TEY7 942 aa12.14□□□□□ -0.47
LAMA4-201ENST00000230538 TMEM143Q96AN5 459 aa12.14□□□□□ -0.47
LAMA4-201ENST00000230538 TSPAN17Q96FV3 270 aa12.14□□□□□ -0.47
LAMA4-201ENST00000230538 MCEEQ96PE7 176 aa12.14□□□□□ -0.47
LAMA4-201ENST00000230538 KIF2CQ99661 725 aa12.14□□□□□ -0.47
LAMA4-201ENST00000230538 ARL2BPQ9Y2Y0 163 aa12.14□□□□□ -0.47
LAMA4-201ENST00000230538 PITPNM2Q9BZ72 1349 aa12.14□□□□□ -0.47
LAMA4-201ENST00000230538 SERPIND1P05546 499 aa12.14□□□□□ -0.47
LAMA4-201ENST00000230538 HIST1H2AGP0C0S8 130 aaPredicted RBP12.14□□□□□ -0.47
LAMA4-201ENST00000230538 HIST1H2ADP20671 130 aa12.14□□□□□ -0.47
LAMA4-201ENST00000230538 SLC18A3Q16572 532 aa12.14□□□□□ -0.47
LAMA4-201ENST00000230538 C12orf60Q5U649 245 aa12.14□□□□□ -0.47
LAMA4-201ENST00000230538 ATG9AQ7Z3C6 839 aa12.14□□□□□ -0.47
LAMA4-201ENST00000230538 ARHGEF26Q96DR7 871 aa12.14□□□□□ -0.47
LAMA4-201ENST00000230538 PDLIM2Q96JY6 352 aa12.14□□□□□ -0.47
LAMA4-201ENST00000230538 HIST1H2AHQ96KK5 128 aa12.14□□□□□ -0.47
LAMA4-201ENST00000230538 MED15Q96RN5 788 aa12.14□□□□□ -0.47
LAMA4-201ENST00000230538 HIST1H2AJQ99878 128 aa12.14□□□□□ -0.47
LAMA4-201ENST00000230538 H2AFJQ9BTM1 129 aa12.14□□□□□ -0.47
LAMA4-201ENST00000230538 NPHS2Q9NP85 383 aa12.14□□□□□ -0.47
LAMA4-201ENST00000230538 KLC4Q9NSK0 619 aa12.14□□□□□ -0.47
LAMA4-201ENST00000230538 ARHGEF38Q9NXL2 777 aa12.14□□□□□ -0.47
LAMA4-201ENST00000230538 SMARCAL1Q9NZC9 954 aa12.14□□□□□ -0.47
LAMA4-201ENST00000230538 UVRAGQ9P2Y5 699 aa12.14□□□□□ -0.47
LAMA4-201ENST00000230538 TRAPPC3O43617 180 aa12.13□□□□□ -0.47
LAMA4-201ENST00000230538 ARIH2O95376 493 aa12.13□□□□□ -0.47
LAMA4-201ENST00000230538 SERPINB4P48594 390 aa12.13□□□□□ -0.47
LAMA4-201ENST00000230538 STILQ15468 1287 aa12.13□□□□□ -0.47
LAMA4-201ENST00000230538 ICE2Q659A1 982 aa12.13□□□□□ -0.47
LAMA4-201ENST00000230538 NUDT18Q6ZVK8 323 aa12.13□□□□□ -0.47
LAMA4-201ENST00000230538 DBR1Q9UK59 544 aaKnown RBP12.13□□□□□ -0.47
LAMA4-201ENST00000230538 SNX9Q9Y5X1 595 aa12.13□□□□□ -0.47
LAMA4-201ENST00000230538 OVOS2A0A0G2JMS6 1433 aa12.13□□□□□ -0.47
LAMA4-201ENST00000230538 OVOS2A0A0J9YW53 1432 aa12.13□□□□□ -0.47
LAMA4-201ENST00000230538 OVOS2Q6IE36 1432 aa12.13□□□□□ -0.47
LAMA4-201ENST00000230538 A0A1B0GTH6 734 aa12.13□□□□□ -0.47
LAMA4-201ENST00000230538 CYTH1Q15438 398 aa12.13□□□□□ -0.47
LAMA4-201ENST00000230538 NUP93Q8N1F7 819 aa12.13□□□□□ -0.47
LAMA4-201ENST00000230538 ZNF473Q8WTR7 871 aaKnown RBP12.13□□□□□ -0.47
LAMA4-201ENST00000230538 TMEM117Q9H0C3 514 aa12.13□□□□□ -0.47
LAMA4-201ENST00000230538 WDR35Q9P2L0 1181 aa12.13□□□□□ -0.47
LAMA4-201ENST00000230538 CDC42BPAQ5VT25 1732 aa12.13□□□□□ -0.47
LAMA4-201ENST00000230538 C5orf58C9J3I9 102 aa12.13□□□□□ -0.47
LAMA4-201ENST00000230538 PDGFRAP16234 1089 aa12.13□□□□□ -0.47
LAMA4-201ENST00000230538 PCYT1AP49585 367 aa12.13□□□□□ -0.47
LAMA4-201ENST00000230538 KIZQ2M2Z5 673 aa12.13□□□□□ -0.47
LAMA4-201ENST00000230538 TMA16Q96EY4 203 aaKnown RBP12.13□□□□□ -0.47
LAMA4-201ENST00000230538 TRIM9Q9C026 710 aa12.13□□□□□ -0.47
LAMA4-201ENST00000230538 EPN3Q9H201 632 aa12.13□□□□□ -0.47
LAMA4-201ENST00000230538 SELENONQ9NZV5 590 aa12.13□□□□□ -0.47
LAMA4-201ENST00000230538 ZC3H7BQ9UGR2 993 aaKnown RBP12.13□□□□□ -0.47
LAMA4-201ENST00000230538 ERFP50548 548 aa12.13□□□□□ -0.47
LAMA4-201ENST00000230538 SH2D3CQ8N5H7 860 aa12.13□□□□□ -0.47
LAMA4-201ENST00000230538 PTPRN2Q92932 1015 aa12.13□□□□□ -0.47
LAMA4-201ENST00000230538 REEP2Q9BRK0 252 aa12.13□□□□□ -0.47
LAMA4-201ENST00000230538 PKD2L2Q9NZM6 624 aa12.13□□□□□ -0.47
LAMA4-201ENST00000230538 POLRMTO00411 1230 aaKnown RBP12.13□□□□□ -0.47
LAMA4-201ENST00000230538 DGAT1O75907 488 aa12.13□□□□□ -0.47
LAMA4-201ENST00000230538 MYBP10242 640 aa12.13□□□□□ -0.47
LAMA4-201ENST00000230538 MDH1P40925 334 aaKnown RBP12.13□□□□□ -0.47
LAMA4-201ENST00000230538 NCOA4Q13772 614 aa12.13□□□□□ -0.47
LAMA4-201ENST00000230538 PIGHQ14442 188 aaPredicted RBP12.13□□□□□ -0.47
LAMA4-201ENST00000230538 CNGA3Q16281 694 aa12.13□□□□□ -0.47
LAMA4-201ENST00000230538 PAWRQ96IZ0 340 aaKnown RBP12.13□□□□□ -0.47
LAMA4-201ENST00000230538 RAB6BQ9NRW1 208 aa12.13□□□□□ -0.47
LAMA4-201ENST00000230538 EEF2KO00418 725 aaKnown RBP12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms