RNA–Protein interactions for RNA: ENST00000230085.12

SNX3-201, Transcript of sorting nexin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX3, Length 1,755 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-201ENST00000230085 SLC9A9Q8IVB4 645 aa21.97■■□□□ 1.11
SNX3-201ENST00000230085 FBXO16Q8IX29 292 aaPredicted RBP21.97■■□□□ 1.11
SNX3-201ENST00000230085 FBXO25Q8TCJ0 367 aa21.97■■□□□ 1.11
SNX3-201ENST00000230085 KATNBL1Q9H079 304 aa21.97■■□□□ 1.11
SNX3-201ENST00000230085 EHMT1Q9H9B1 1298 aa21.97■■□□□ 1.11
SNX3-201ENST00000230085 LRRC4CQ9HCJ2 640 aa21.97■■□□□ 1.11
SNX3-201ENST00000230085 USP20Q9Y2K6 914 aa21.97■■□□□ 1.11
SNX3-201ENST00000230085 IGSF9BQ9UPX0 1349 aa21.97■■□□□ 1.11
SNX3-201ENST00000230085 SNX3O60493 162 aa21.97■■□□□ 1.11
SNX3-201ENST00000230085 MYCP01106 439 aaPredicted RBP21.97■■□□□ 1.11
SNX3-201ENST00000230085 CCND2P30279 289 aa21.97■■□□□ 1.11
SNX3-201ENST00000230085 MCCD1P59942 119 aaPredicted RBP21.97■■□□□ 1.11
SNX3-201ENST00000230085 ARHGAP4P98171 946 aa21.97■■□□□ 1.11
SNX3-201ENST00000230085 CACNB1Q02641 598 aaPredicted RBP21.97■■□□□ 1.11
SNX3-201ENST00000230085 DRAP1Q14919 205 aaPredicted RBP21.97■■□□□ 1.11
SNX3-201ENST00000230085 FAM186BQ8IYM0 893 aa21.97■■□□□ 1.11
SNX3-201ENST00000230085 UBL4BQ8N7F7 174 aa21.97■■□□□ 1.11
SNX3-201ENST00000230085 TRPV1Q8NER1 839 aa21.97■■□□□ 1.11
SNX3-201ENST00000230085 ART4Q93070 314 aa21.97■■□□□ 1.11
SNX3-201ENST00000230085 ANKRD27Q96NW4 1050 aa21.97■■□□□ 1.11
SNX3-201ENST00000230085 ABHD16BQ9H3Z7 469 aa21.97■■□□□ 1.11
SNX3-201ENST00000230085 ERVK-5Q9HDB9 667 aa21.97■■□□□ 1.11
SNX3-201ENST00000230085 CASP4P49662 377 aa21.96■■□□□ 1.11
SNX3-201ENST00000230085 ACVR2BQ13705 512 aa21.96■■□□□ 1.11
SNX3-201ENST00000230085 CNGA2Q16280 664 aa21.96■■□□□ 1.11
SNX3-201ENST00000230085 MAP3K21Q5TCX8 1036 aa21.96■■□□□ 1.11
SNX3-201ENST00000230085 GLYCTKQ8IVS8 523 aa21.96■■□□□ 1.11
SNX3-201ENST00000230085 LRRC34Q8IZ02 419 aa21.96■■□□□ 1.11
SNX3-201ENST00000230085 PRELID2Q8N945 189 aa21.96■■□□□ 1.11
SNX3-201ENST00000230085 ALG3Q92685 438 aa21.96■■□□□ 1.11
SNX3-201ENST00000230085 PDGFCQ9NRA1 345 aa21.96■■□□□ 1.11
SNX3-201ENST00000230085 HOMER3Q9NSC5 361 aa21.96■■□□□ 1.11
SNX3-201ENST00000230085 APEX2Q9UBZ4 518 aa21.96■■□□□ 1.11
SNX3-201ENST00000230085 DNAJC12Q9UKB3 198 aa21.96■■□□□ 1.11
SNX3-201ENST00000230085 VAV3Q9UKW4 847 aa21.96■■□□□ 1.11
SNX3-201ENST00000230085 LRRC37A2A6NM11 1700 aa21.95■■□□□ 1.1
SNX3-201ENST00000230085 RIPK2O43353 540 aa21.95■■□□□ 1.1
SNX3-201ENST00000230085 TBCAO75347 108 aaKnown RBP21.95■■□□□ 1.1
SNX3-201ENST00000230085 TCEA3O75764 348 aa21.95■■□□□ 1.1
SNX3-201ENST00000230085 RGS20O76081 388 aa21.95■■□□□ 1.1
SNX3-201ENST00000230085 CYP3A4P08684 503 aa21.95■■□□□ 1.1
SNX3-201ENST00000230085 ZNF865P0CJ78 1059 aaPredicted RBP21.95■■□□□ 1.1
SNX3-201ENST00000230085 CYBAP13498 195 aa21.95■■□□□ 1.1
SNX3-201ENST00000230085 SLC29A2Q14542 456 aa21.95■■□□□ 1.1
SNX3-201ENST00000230085 GJA10Q969M2 543 aa21.95■■□□□ 1.1
SNX3-201ENST00000230085 KCND2Q9NZV8 630 aa21.95■■□□□ 1.1
SNX3-201ENST00000230085 P4HA2O15460 535 aa21.94■■□□□ 1.1
SNX3-201ENST00000230085 RTN2O75298 545 aa21.94■■□□□ 1.1
SNX3-201ENST00000230085 CCND3P30281 292 aaPredicted RBP21.94■■□□□ 1.1
SNX3-201ENST00000230085 SKIV2L2P42285 1042 aaKnown RBP21.94■■□□□ 1.1
SNX3-201ENST00000230085 PSMC6P62333 389 aa21.94■■□□□ 1.1
SNX3-201ENST00000230085 TCERG1LQ5VWI1 586 aa21.94■■□□□ 1.1
SNX3-201ENST00000230085 HIBCHQ6NVY1 386 aaPredicted RBP21.94■■□□□ 1.1
SNX3-201ENST00000230085 TAPT1Q6NXT6 567 aa21.94■■□□□ 1.1
SNX3-201ENST00000230085 CEP57Q86XR8 500 aa21.94■■□□□ 1.1
SNX3-201ENST00000230085 CYP2W1Q8TAV3 490 aa21.94■■□□□ 1.1
SNX3-201ENST00000230085 SERPINB12Q96P63 405 aa21.94■■□□□ 1.1
SNX3-201ENST00000230085 ZSWIM1Q9BR11 485 aa21.94■■□□□ 1.1
SNX3-201ENST00000230085 WNT8AQ9H1J5 351 aa21.94■■□□□ 1.1
SNX3-201ENST00000230085 TUFT1Q9NNX1 390 aa21.94■■□□□ 1.1
SNX3-201ENST00000230085 PMM2O15305 246 aa21.94■■□□□ 1.1
SNX3-201ENST00000230085 PEX5P50542 639 aa21.94■■□□□ 1.1
SNX3-201ENST00000230085 PLTPP55058 493 aa21.94■■□□□ 1.1
SNX3-201ENST00000230085 AUHQ13825 339 aaKnown RBP21.94■■□□□ 1.1
SNX3-201ENST00000230085 MTFR1Q15390 333 aa21.94■■□□□ 1.1
SNX3-201ENST00000230085 PPP1R7Q15435 360 aa21.94■■□□□ 1.1
SNX3-201ENST00000230085 SEPT14Q6ZU15 432 aa21.94■■□□□ 1.1
SNX3-201ENST00000230085 STXBP4Q6ZWJ1 553 aa21.94■■□□□ 1.1
SNX3-201ENST00000230085 CD101Q93033 1021 aa21.94■■□□□ 1.1
SNX3-201ENST00000230085 SCLT1Q96NL6 688 aa21.94■■□□□ 1.1
SNX3-201ENST00000230085 AZI2Q9H6S1 392 aa21.94■■□□□ 1.1
SNX3-201ENST00000230085 ALG6Q9Y672 507 aa21.94■■□□□ 1.1
SNX3-201ENST00000230085 GJB6O95452 261 aa21.93■■□□□ 1.1
SNX3-201ENST00000230085 ITGB5P18084 799 aa21.93■■□□□ 1.1
SNX3-201ENST00000230085 CNGA1P29973 690 aa21.93■■□□□ 1.1
SNX3-201ENST00000230085 ATP5DP30049 168 aa21.93■■□□□ 1.1
SNX3-201ENST00000230085 RPL21P46778 160 aaKnown RBP21.93■■□□□ 1.1
SNX3-201ENST00000230085 CTTNQ14247 550 aaKnown RBP21.93■■□□□ 1.1
SNX3-201ENST00000230085 XRRA1Q6P2D8 792 aa21.93■■□□□ 1.1
SNX3-201ENST00000230085 GLG1Q92896 1179 aa21.93■■□□□ 1.1
SNX3-201ENST00000230085 ARHGEF26Q96DR7 871 aa21.93■■□□□ 1.1
SNX3-201ENST00000230085 VTA1Q9NP79 307 aa21.93■■□□□ 1.1
SNX3-201ENST00000230085 COG5Q9UP83 839 aa21.93■■□□□ 1.1
SNX3-201ENST00000230085 KIAA1217Q5T5P2 1943 aa21.93■■□□□ 1.1
SNX3-201ENST00000230085 FAM86B1E9PN63 330 aa21.92■■□□□ 1.1
SNX3-201ENST00000230085 RASGRF2O14827 1237 aa21.92■■□□□ 1.1
SNX3-201ENST00000230085 FAM86B2P0C5J1 330 aa21.92■■□□□ 1.1
SNX3-201ENST00000230085 TNFAIP3P21580 790 aa21.92■■□□□ 1.1
SNX3-201ENST00000230085 CCNG1P51959 295 aa21.92■■□□□ 1.1
SNX3-201ENST00000230085 TMEM63BQ5T3F8 832 aa21.92■■□□□ 1.1
SNX3-201ENST00000230085 GJB7Q6PEY0 223 aa21.92■■□□□ 1.1
SNX3-201ENST00000230085 RSRC1Q96IZ7 334 aaKnown RBP21.92■■□□□ 1.1
SNX3-201ENST00000230085 ZNF333Q96JL9 665 aa21.92■■□□□ 1.1
SNX3-201ENST00000230085 WDR11Q9BZH6 1224 aa21.92■■□□□ 1.1
SNX3-201ENST00000230085 INTS2Q9H0H0 1204 aaKnown RBP21.92■■□□□ 1.1
SNX3-201ENST00000230085 ZHX3Q9H4I2 956 aa21.92■■□□□ 1.1
SNX3-201ENST00000230085 WHRNQ9P202 907 aa21.92■■□□□ 1.1
SNX3-201ENST00000230085 SNX24Q9Y343 169 aa21.92■■□□□ 1.1
SNX3-201ENST00000230085 USP15Q9Y4E8 981 aaPredicted RBP21.92■■□□□ 1.1
SNX3-201ENST00000230085 C11orf97A0A1B0GVM6 126 aaPredicted RBP21.92■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms