RNA–Protein interactions for RNA: ENST00000221922.10

CCDC9-201, Transcript of coiled-coil domain containing 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC9, Length 2,093 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-201ENST00000221922 GSTTP1A0A1W2PQM5 241 aa23.73■■□□□ 1.39
CCDC9-201ENST00000221922 TMEM110-MUSTN1A8MSY1 372 aa23.73■■□□□ 1.39
CCDC9-201ENST00000221922 COMTP21964 271 aa23.73■■□□□ 1.39
CCDC9-201ENST00000221922 NAMPTP43490 491 aa23.73■■□□□ 1.39
CCDC9-201ENST00000221922 IFT88Q13099 833 aa23.73■■□□□ 1.39
CCDC9-201ENST00000221922 BYSLQ13895 437 aaKnown RBP23.73■■□□□ 1.39
CCDC9-201ENST00000221922 MESDQ14696 234 aa23.73■■□□□ 1.39
CCDC9-201ENST00000221922 SEL1L2Q5TEA6 688 aa23.73■■□□□ 1.39
CCDC9-201ENST00000221922 ACAD10Q6JQN1 1059 aa23.73■■□□□ 1.39
CCDC9-201ENST00000221922 AADACL2Q6P093 401 aa23.73■■□□□ 1.39
CCDC9-201ENST00000221922 FNBP1Q96RU3 617 aa23.73■■□□□ 1.39
CCDC9-201ENST00000221922 GRHL1Q9NZI5 618 aa23.73■■□□□ 1.39
CCDC9-201ENST00000221922 TRPC6Q9Y210 931 aa23.73■■□□□ 1.39
CCDC9-201ENST00000221922 PODXLO00592 558 aa23.72■■□□□ 1.39
CCDC9-201ENST00000221922 ARL2P36404 184 aa23.72■■□□□ 1.39
CCDC9-201ENST00000221922 RFC5P40937 340 aa23.72■■□□□ 1.39
CCDC9-201ENST00000221922 PLTPP55058 493 aa23.72■■□□□ 1.39
CCDC9-201ENST00000221922 PLCB4Q15147 1175 aa23.72■■□□□ 1.39
CCDC9-201ENST00000221922 SLFN12LQ6IEE8 588 aa23.72■■□□□ 1.39
CCDC9-201ENST00000221922 KCNV1Q6PIU1 500 aa23.72■■□□□ 1.39
CCDC9-201ENST00000221922 USP50Q70EL3 339 aaPredicted RBP23.72■■□□□ 1.39
CCDC9-201ENST00000221922 ZC3H15Q8WU90 426 aaKnown RBP23.72■■□□□ 1.39
CCDC9-201ENST00000221922 SLC7A3Q8WY07 619 aa23.72■■□□□ 1.39
CCDC9-201ENST00000221922 DDX1Q92499 740 aaKnown RBP23.72■■□□□ 1.39
CCDC9-201ENST00000221922 CD101Q93033 1021 aa23.72■■□□□ 1.39
CCDC9-201ENST00000221922 TATDN2Q93075 761 aa23.72■■□□□ 1.39
CCDC9-201ENST00000221922 C18orf8Q96DM3 657 aa23.72■■□□□ 1.39
CCDC9-201ENST00000221922 PGM2Q96G03 612 aa23.72■■□□□ 1.39
CCDC9-201ENST00000221922 SNX24Q9Y343 169 aa23.72■■□□□ 1.39
CCDC9-201ENST00000221922 PCDHA3Q9Y5H8 950 aa23.72■■□□□ 1.39
CCDC9-201ENST00000221922 FAM170AA1A519 330 aa23.72■■□□□ 1.39
CCDC9-201ENST00000221922 CAND2O75155 1236 aa23.72■■□□□ 1.39
CCDC9-201ENST00000221922 PIGRP01833 764 aa23.72■■□□□ 1.39
CCDC9-201ENST00000221922 KRT5P13647 590 aa23.72■■□□□ 1.39
CCDC9-201ENST00000221922 MARCKSL1P49006 195 aa23.72■■□□□ 1.39
CCDC9-201ENST00000221922 ACTN3Q08043 901 aaPredicted RBP23.72■■□□□ 1.39
CCDC9-201ENST00000221922 QPCTQ16769 361 aa23.72■■□□□ 1.39
CCDC9-201ENST00000221922 WDR44Q5JSH3 913 aa23.72■■□□□ 1.39
CCDC9-201ENST00000221922 C9orf131Q5VYM1 1079 aa23.72■■□□□ 1.39
CCDC9-201ENST00000221922 ZDHHC14Q8IZN3 488 aa23.72■■□□□ 1.39
CCDC9-201ENST00000221922 FBXO25Q8TCJ0 367 aa23.72■■□□□ 1.39
CCDC9-201ENST00000221922 PSPC1Q8WXF1 523 aaKnown RBP23.72■■□□□ 1.39
CCDC9-201ENST00000221922 L3MBTL3Q96JM7 780 aaPredicted RBP23.72■■□□□ 1.39
CCDC9-201ENST00000221922 PCYT2Q99447 389 aa23.72■■□□□ 1.39
CCDC9-201ENST00000221922 MPHOSPH6Q99547 160 aaKnown RBP23.72■■□□□ 1.39
CCDC9-201ENST00000221922 ACP6Q9NPH0 428 aa23.72■■□□□ 1.39
CCDC9-201ENST00000221922 UTRNP46939 3433 aa23.72■■□□□ 1.39
CCDC9-201ENST00000221922 GLRA2P23416 452 aa23.71■■□□□ 1.39
CCDC9-201ENST00000221922 TARBP2Q15633 366 aaKnown RBP23.71■■□□□ 1.39
CCDC9-201ENST00000221922 CYP1B1Q16678 543 aa23.71■■□□□ 1.39
CCDC9-201ENST00000221922 RNF187Q5TA31 235 aaPredicted RBP23.71■■□□□ 1.39
CCDC9-201ENST00000221922 FAM160B1Q5W0V3 765 aa23.71■■□□□ 1.39
CCDC9-201ENST00000221922 ZNF677Q86XU0 584 aa23.71■■□□□ 1.39
CCDC9-201ENST00000221922 DEPTORQ8TB45 409 aa23.71■■□□□ 1.39
CCDC9-201ENST00000221922 ASAP3Q8TDY4 903 aa23.71■■□□□ 1.39
CCDC9-201ENST00000221922 TMEM143Q96AN5 459 aa23.71■■□□□ 1.39
CCDC9-201ENST00000221922 RNF25Q96BH1 459 aaPredicted RBP23.71■■□□□ 1.39
CCDC9-201ENST00000221922 AGO2Q9UKV8 859 aaKnown RBP23.71■■□□□ 1.39
CCDC9-201ENST00000221922 SHBGP04278 402 aa23.71■■□□□ 1.39
CCDC9-201ENST00000221922 CDR1P51861 262 aa23.71■■□□□ 1.39
CCDC9-201ENST00000221922 BPIFB4P59827 614 aa23.71■■□□□ 1.39
CCDC9-201ENST00000221922 CLEC16AQ2KHT3 1053 aa23.71■■□□□ 1.39
CCDC9-201ENST00000221922 METTL7BQ6UX53 244 aa23.71■■□□□ 1.39
CCDC9-201ENST00000221922 NRBP2Q9NSY0 501 aa23.71■■□□□ 1.39
CCDC9-201ENST00000221922 PARP2Q9UGN5 583 aa23.71■■□□□ 1.39
CCDC9-201ENST00000221922 ATMINO43313 823 aaPredicted RBP23.7■■□□□ 1.38
CCDC9-201ENST00000221922 SPOPO43791 374 aa23.7■■□□□ 1.38
CCDC9-201ENST00000221922 LDHAP00338 332 aaKnown RBP23.7■■□□□ 1.38
CCDC9-201ENST00000221922 MOGSQ13724 837 aa23.7■■□□□ 1.38
CCDC9-201ENST00000221922 ZACNQ401N2 412 aa23.7■■□□□ 1.38
CCDC9-201ENST00000221922 DENND2CQ68D51 928 aa23.7■■□□□ 1.38
CCDC9-201ENST00000221922 TTC27Q6P3X3 843 aa23.7■■□□□ 1.38
CCDC9-201ENST00000221922 DHX38Q92620 1227 aaKnown RBP23.7■■□□□ 1.38
CCDC9-201ENST00000221922 PPME1Q9Y570 386 aa23.7■■□□□ 1.38
CCDC9-201ENST00000221922 TNNI1P19237 187 aa23.69■■□□□ 1.38
CCDC9-201ENST00000221922 RPL21P46778 160 aaKnown RBP23.69■■□□□ 1.38
CCDC9-201ENST00000221922 ERMARDQ5T6L9 678 aa23.69■■□□□ 1.38
CCDC9-201ENST00000221922 SEC16BQ96JE7 1060 aa23.69■■□□□ 1.38
CCDC9-201ENST00000221922 RUNDC3BQ96NL0 473 aa23.69■■□□□ 1.38
CCDC9-201ENST00000221922 SRCAPQ6ZRS2 3230 aa23.69■■□□□ 1.38
CCDC9-201ENST00000221922 K7ERI5 159 aa23.69■■□□□ 1.38
CCDC9-201ENST00000221922 STAT5BP51692 787 aa23.69■■□□□ 1.38
CCDC9-201ENST00000221922 MOB2Q70IA6 237 aa23.69■■□□□ 1.38
CCDC9-201ENST00000221922 SEPT1Q8WYJ6 367 aa23.69■■□□□ 1.38
CCDC9-201ENST00000221922 ZNF516Q92618 1163 aa23.69■■□□□ 1.38
CCDC9-201ENST00000221922 TRIM11Q96F44 468 aa23.69■■□□□ 1.38
CCDC9-201ENST00000221922 PI4K2AQ9BTU6 479 aa23.69■■□□□ 1.38
CCDC9-201ENST00000221922 TMEM109Q9BVC6 243 aa23.69■■□□□ 1.38
CCDC9-201ENST00000221922 RBPJLQ9UBG7 517 aa23.69■■□□□ 1.38
CCDC9-201ENST00000221922 PCDHB2Q9Y5E7 798 aa23.69■■□□□ 1.38
CCDC9-201ENST00000221922 LRRIQ4A6NIV6 560 aa23.68■■□□□ 1.38
CCDC9-201ENST00000221922 H0YHG0 523 aa23.68■■□□□ 1.38
CCDC9-201ENST00000221922 GRIN3BO60391 1043 aa23.68■■□□□ 1.38
CCDC9-201ENST00000221922 YBX3P16989 372 aaKnown RBP eCLIP23.68■■□□□ 1.38
CCDC9-201ENST00000221922 TTLL12Q14166 644 aaPredicted RBP23.68■■□□□ 1.38
CCDC9-201ENST00000221922 CCDC121Q6ZUS5 278 aa23.68■■□□□ 1.38
CCDC9-201ENST00000221922 FASTKD5Q7L8L6 764 aaKnown RBP23.68■■□□□ 1.38
CCDC9-201ENST00000221922 CROCCP2Q86T23 111 aa23.68■■□□□ 1.38
CCDC9-201ENST00000221922 FGD4Q96M96 766 aa23.68■■□□□ 1.38
CCDC9-201ENST00000221922 XPO6Q96QU8 1125 aaKnown RBP23.68■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms