RNA–Protein interactions for RNA: ENST00000219334.9

SMPD3-201, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD3, Length 5,453 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-201ENST00000219334 GCLCP48506 637 aaPredicted RBP19.96■□□□□ 0.79
SMPD3-201ENST00000219334 FMO5P49326 533 aa19.96■□□□□ 0.79
SMPD3-201ENST00000219334 NLRP11P59045 1033 aaKnown RBP19.96■□□□□ 0.79
SMPD3-201ENST00000219334 KCNH7Q9NS40 1196 aa19.96■□□□□ 0.79
SMPD3-201ENST00000219334 CCDC195A0A1B0GUA6 201 aa19.95■□□□□ 0.78
SMPD3-201ENST00000219334 THPOP40225 353 aa19.95■□□□□ 0.78
SMPD3-201ENST00000219334 PNPLA4P41247 253 aa19.95■□□□□ 0.78
SMPD3-201ENST00000219334 RPS6P62753 249 aaKnown RBP19.95■□□□□ 0.78
SMPD3-201ENST00000219334 C7orf25Q9BPX7 421 aa19.95■□□□□ 0.78
SMPD3-201ENST00000219334 SENP1Q9P0U3 644 aa19.95■□□□□ 0.78
SMPD3-201ENST00000219334 UVRAGQ9P2Y5 699 aa19.95■□□□□ 0.78
SMPD3-201ENST00000219334 ARHGEF40Q8TER5 1519 aa19.95■□□□□ 0.78
SMPD3-201ENST00000219334 EEF2KO00418 725 aaKnown RBP19.95■□□□□ 0.78
SMPD3-201ENST00000219334 GFAPP14136 432 aa19.95■□□□□ 0.78
SMPD3-201ENST00000219334 ADCK2Q7Z695 626 aa19.95■□□□□ 0.78
SMPD3-201ENST00000219334 KCTD17Q8N5Z5 321 aa19.95■□□□□ 0.78
SMPD3-201ENST00000219334 LRRC37BQ96QE4 947 aa19.95■□□□□ 0.78
SMPD3-201ENST00000219334 ACTR5Q9H9F9 607 aaPredicted RBP19.95■□□□□ 0.78
SMPD3-201ENST00000219334 NPTXRO95502 500 aa19.95■□□□□ 0.78
SMPD3-201ENST00000219334 TCF7P36402 384 aaPredicted RBP19.95■□□□□ 0.78
SMPD3-201ENST00000219334 ARID5BQ14865 1188 aa19.95■□□□□ 0.78
SMPD3-201ENST00000219334 DEFB132Q7Z7B7 95 aa19.95■□□□□ 0.78
SMPD3-201ENST00000219334 PIP4K2CQ8TBX8 421 aa19.95■□□□□ 0.78
SMPD3-201ENST00000219334 ZKSCAN4Q969J2 545 aaPredicted RBP19.95■□□□□ 0.78
SMPD3-201ENST00000219334 AGAP3Q96P47 875 aa19.95■□□□□ 0.78
SMPD3-201ENST00000219334 NEUROG2Q9H2A3 272 aa19.95■□□□□ 0.78
SMPD3-201ENST00000219334 FAM49BQ9NUQ9 324 aa19.95■□□□□ 0.78
SMPD3-201ENST00000219334 DYNC1LI1Q9Y6G9 523 aaKnown RBP19.95■□□□□ 0.78
SMPD3-201ENST00000219334 FOXN1O15353 648 aa19.95■□□□□ 0.78
SMPD3-201ENST00000219334 AARSP49588 968 aaKnown RBP eCLIP19.94■□□□□ 0.78
SMPD3-201ENST00000219334 CLCN6P51797 869 aa19.94■□□□□ 0.78
SMPD3-201ENST00000219334 SNRPFP62306 86 aaKnown RBP19.94■□□□□ 0.78
SMPD3-201ENST00000219334 ARRDC4Q8NCT1 418 aa19.94■□□□□ 0.78
SMPD3-201ENST00000219334 TAAR1Q96RJ0 339 aa19.94■□□□□ 0.78
SMPD3-201ENST00000219334 RALBP11234 206 aa19.94■□□□□ 0.78
SMPD3-201ENST00000219334 TMEM132BQ14DG7 1078 aa19.94■□□□□ 0.78
SMPD3-201ENST00000219334 UBE2Q2Q8WVN8 375 aa19.94■□□□□ 0.78
SMPD3-201ENST00000219334 CPA5Q8WXQ8 436 aa19.94■□□□□ 0.78
SMPD3-201ENST00000219334 MTFR1LQ9H019 292 aa19.94■□□□□ 0.78
SMPD3-201ENST00000219334 CATSPERBQ9H7T0 1116 aa19.94■□□□□ 0.78
SMPD3-201ENST00000219334 SUFUQ9UMX1 484 aa19.94■□□□□ 0.78
SMPD3-201ENST00000219334 GYG2O15488 501 aa19.94■□□□□ 0.78
SMPD3-201ENST00000219334 GAS2O43903 313 aaKnown RBP19.94■□□□□ 0.78
SMPD3-201ENST00000219334 P3H1Q32P28 736 aa19.94■□□□□ 0.78
SMPD3-201ENST00000219334 TEDDM1Q5T9Z0 273 aa19.94■□□□□ 0.78
SMPD3-201ENST00000219334 ATL2Q8NHH9 583 aa19.94■□□□□ 0.78
SMPD3-201ENST00000219334 USP33Q8TEY7 942 aa19.94■□□□□ 0.78
SMPD3-201ENST00000219334 HPS3Q969F9 1004 aa19.94■□□□□ 0.78
SMPD3-201ENST00000219334 SRPK1Q96SB4 655 aaKnown RBP19.94■□□□□ 0.78
SMPD3-201ENST00000219334 NAGPAQ9UK23 515 aa19.94■□□□□ 0.78
SMPD3-201ENST00000219334 SERPIND1P05546 499 aa19.94■□□□□ 0.78
SMPD3-201ENST00000219334 TAF6P49848 677 aa19.94■□□□□ 0.78
SMPD3-201ENST00000219334 MAPRE1Q15691 268 aaKnown RBP19.94■□□□□ 0.78
SMPD3-201ENST00000219334 OTUB1Q96FW1 271 aaPredicted RBP19.94■□□□□ 0.78
SMPD3-201ENST00000219334 CAPN11Q9UMQ6 739 aa19.94■□□□□ 0.78
SMPD3-201ENST00000219334 ARHGAP10A1A4S6 786 aa19.93■□□□□ 0.78
SMPD3-201ENST00000219334 TLR2O60603 784 aa19.93■□□□□ 0.78
SMPD3-201ENST00000219334 EPHX2P34913 555 aa19.93■□□□□ 0.78
SMPD3-201ENST00000219334 DHX34Q14147 1143 aaKnown RBP19.93■□□□□ 0.78
SMPD3-201ENST00000219334 PIGHQ14442 188 aaPredicted RBP19.93■□□□□ 0.78
SMPD3-201ENST00000219334 HIF1AQ16665 826 aa19.93■□□□□ 0.78
SMPD3-201ENST00000219334 YIPF2Q9BWQ6 316 aa19.93■□□□□ 0.78
SMPD3-201ENST00000219334 EML4Q9HC35 981 aaKnown RBP19.93■□□□□ 0.78
SMPD3-201ENST00000219334 NDUFS3O75489 264 aa19.93■□□□□ 0.78
SMPD3-201ENST00000219334 GNL1P36915 607 aaPredicted RBP19.93■□□□□ 0.78
SMPD3-201ENST00000219334 MMS22LQ6ZRQ5 1243 aa19.93■□□□□ 0.78
SMPD3-201ENST00000219334 SLC30A5Q8TAD4 765 aa19.93■□□□□ 0.78
SMPD3-201ENST00000219334 GBA2Q9HCG7 927 aaPredicted RBP19.93■□□□□ 0.78
SMPD3-201ENST00000219334 ANLNQ9NQW6 1124 aa19.93■□□□□ 0.78
SMPD3-201ENST00000219334 CFAP99D6REC4 459 aa19.93■□□□□ 0.78
SMPD3-201ENST00000219334 GPR182O15218 404 aa19.93■□□□□ 0.78
SMPD3-201ENST00000219334 HLA-DRAP01903 254 aa19.93■□□□□ 0.78
SMPD3-201ENST00000219334 CHSY1Q86X52 802 aa19.93■□□□□ 0.78
SMPD3-201ENST00000219334 PPP1R2P1Q96PQ5 205 aa19.93■□□□□ 0.78
SMPD3-201ENST00000219334 MAP3K14Q99558 947 aa19.93■□□□□ 0.78
SMPD3-201ENST00000219334 CHCHD3Q9NX63 227 aaKnown RBP19.93■□□□□ 0.78
SMPD3-201ENST00000219334 EXTL3O43909 919 aa19.93■□□□□ 0.78
SMPD3-201ENST00000219334 SPAG7O75391 227 aa19.93■□□□□ 0.78
SMPD3-201ENST00000219334 BRAFP15056 766 aa19.93■□□□□ 0.78
SMPD3-201ENST00000219334 PDAP1Q13442 181 aaKnown RBP19.93■□□□□ 0.78
SMPD3-201ENST00000219334 ARHGAP18Q8N392 663 aa19.93■□□□□ 0.78
SMPD3-201ENST00000219334 CLTCL1P53675 1640 aa19.93■□□□□ 0.78
SMPD3-201ENST00000219334 OCM2P0CE71 109 aa19.92■□□□□ 0.78
SMPD3-201ENST00000219334 OCMP0CE72 109 aaPredicted RBP19.92■□□□□ 0.78
SMPD3-201ENST00000219334 CAP2P40123 477 aa19.92■□□□□ 0.78
SMPD3-201ENST00000219334 TGFB2P61812 414 aa19.92■□□□□ 0.78
SMPD3-201ENST00000219334 TMEM259Q4ZIN3 620 aa19.92■□□□□ 0.78
SMPD3-201ENST00000219334 C10orf120Q5SQS8 335 aa19.92■□□□□ 0.78
SMPD3-201ENST00000219334 HIBCHQ6NVY1 386 aaPredicted RBP19.92■□□□□ 0.78
SMPD3-201ENST00000219334 SLC7A14Q8TBB6 771 aa19.92■□□□□ 0.78
SMPD3-201ENST00000219334 ATXN7L3BQ96GX2 97 aa19.92■□□□□ 0.78
SMPD3-201ENST00000219334 RNPC3Q96LT9 517 aaKnown RBP19.92■□□□□ 0.78
SMPD3-201ENST00000219334 LATS2Q9NRM7 1088 aa19.92■□□□□ 0.78
SMPD3-201ENST00000219334 TWF1Q12792 350 aa19.92■□□□□ 0.78
SMPD3-201ENST00000219334 EFHC1Q5JVL4 640 aa19.92■□□□□ 0.78
SMPD3-201ENST00000219334 CEP19Q96LK0 163 aa19.92■□□□□ 0.78
SMPD3-201ENST00000219334 NR1H4Q96RI1 486 aaPredicted RBP19.92■□□□□ 0.78
SMPD3-201ENST00000219334 UBQLN1Q9UMX0 589 aaKnown RBP19.92■□□□□ 0.78
SMPD3-201ENST00000219334 IQSEC2Q5JU85 1478 aa19.92■□□□□ 0.78
SMPD3-201ENST00000219334 ICAM1P05362 532 aa19.92■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms