RNA–Protein interactions for RNA: ENST00000218348.7

USP11-201, Transcript of ubiquitin specific peptidase 11, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene USP11, Length 3,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-201ENST00000218348 FARP2O94887 1054 aaPredicted RBP10.67□□□□□ -0.7
USP11-201ENST00000218348 SYF2O95926 243 aaKnown RBP10.67□□□□□ -0.7
USP11-201ENST00000218348 CYP11B1P15538 503 aa10.67□□□□□ -0.7
USP11-201ENST00000218348 PRLRP16471 622 aa10.67□□□□□ -0.7
USP11-201ENST00000218348 CLCN3P51790 818 aa10.67□□□□□ -0.7
USP11-201ENST00000218348 DCAF12L1Q5VU92 463 aa10.67□□□□□ -0.7
USP11-201ENST00000218348 TMEM270Q6UE05 265 aa10.67□□□□□ -0.7
USP11-201ENST00000218348 DPH6Q7L8W6 267 aa10.67□□□□□ -0.7
USP11-201ENST00000218348 SUGP1Q8IWZ8 645 aaKnown RBP10.67□□□□□ -0.7
USP11-201ENST00000218348 SPATA33Q96N06 139 aa10.67□□□□□ -0.7
USP11-201ENST00000218348 RUFY1Q96T51 708 aa10.67□□□□□ -0.7
USP11-201ENST00000218348 INO80BQ9C086 356 aaPredicted RBP10.67□□□□□ -0.7
USP11-201ENST00000218348 TSKSQ9UJT2 592 aa10.67□□□□□ -0.7
USP11-201ENST00000218348 USTQ9Y2C2 406 aa10.67□□□□□ -0.7
USP11-201ENST00000218348 CA12O43570 354 aa10.67□□□□□ -0.7
USP11-201ENST00000218348 HLA-DRAP01903 254 aa10.67□□□□□ -0.7
USP11-201ENST00000218348 COMTP21964 271 aa10.67□□□□□ -0.7
USP11-201ENST00000218348 ATP1A2P50993 1020 aa10.67□□□□□ -0.7
USP11-201ENST00000218348 PDE6CP51160 858 aa10.67□□□□□ -0.7
USP11-201ENST00000218348 ERVK-9P63128 1117 aa10.67□□□□□ -0.7
USP11-201ENST00000218348 ALCAMQ13740 583 aa10.67□□□□□ -0.7
USP11-201ENST00000218348 FAM110CQ1W6H9 321 aa10.67□□□□□ -0.7
USP11-201ENST00000218348 FAM182AQ5T1J6 154 aa10.67□□□□□ -0.7
USP11-201ENST00000218348 MAATS1Q7Z4T9 603 aa10.67□□□□□ -0.7
USP11-201ENST00000218348 SHCBP1Q8NEM2 672 aa10.67□□□□□ -0.7
USP11-201ENST00000218348 HELQQ8TDG4 1101 aa10.67□□□□□ -0.7
USP11-201ENST00000218348 LMBR1Q8WVP7 490 aa10.67□□□□□ -0.7
USP11-201ENST00000218348 ARL8AQ96BM9 186 aa10.67□□□□□ -0.7
USP11-201ENST00000218348 CEP89Q96ST8 783 aa10.67□□□□□ -0.7
USP11-201ENST00000218348 NUP85Q9BW27 656 aa10.67□□□□□ -0.7
USP11-201ENST00000218348 ERVK-5Q9HDB9 667 aa10.67□□□□□ -0.7
USP11-201ENST00000218348 C1orf112Q9NSG2 853 aa10.67□□□□□ -0.7
USP11-201ENST00000218348 TCRBV7S2A1N4TA0A589 114 aa10.66□□□□□ -0.7
USP11-201ENST00000218348 TARSL2A2RTX5 802 aaKnown RBP10.66□□□□□ -0.7
USP11-201ENST00000218348 GOLGA6CA6NDK9 693 aa10.66□□□□□ -0.7
USP11-201ENST00000218348 GOLGA6DP0CG33 693 aa10.66□□□□□ -0.7
USP11-201ENST00000218348 FLT3P36888 993 aa10.66□□□□□ -0.7
USP11-201ENST00000218348 KCNJ1P48048 391 aa10.66□□□□□ -0.7
USP11-201ENST00000218348 TNNC1P63316 161 aa10.66□□□□□ -0.7
USP11-201ENST00000218348 FMO1Q01740 532 aa10.66□□□□□ -0.7
USP11-201ENST00000218348 SREBF2Q12772 1141 aa10.66□□□□□ -0.7
USP11-201ENST00000218348 CAPSQ13938 189 aa10.66□□□□□ -0.7
USP11-201ENST00000218348 KCTD2Q14681 263 aa10.66□□□□□ -0.7
USP11-201ENST00000218348 C10orf76Q5T2E6 689 aa10.66□□□□□ -0.7
USP11-201ENST00000218348 TDRD10Q5VZ19 366 aaKnown RBP10.66□□□□□ -0.7
USP11-201ENST00000218348 IFT20Q8IY31 132 aa10.66□□□□□ -0.7
USP11-201ENST00000218348 RNPC3Q96LT9 517 aaKnown RBP10.66□□□□□ -0.7
USP11-201ENST00000218348 SUDS3Q9H7L9 328 aaPredicted RBP10.66□□□□□ -0.7
USP11-201ENST00000218348 TMEM8AQ9HCN3 771 aa10.66□□□□□ -0.7
USP11-201ENST00000218348 RNF186Q9NXI6 227 aa10.66□□□□□ -0.7
USP11-201ENST00000218348 SAGE1Q9NXZ1 904 aa10.66□□□□□ -0.7
USP11-201ENST00000218348 GOLGA6AQ9NYA3 693 aa10.66□□□□□ -0.7
USP11-201ENST00000218348 SMIM23A6NLE4 172 aa10.66□□□□□ -0.7
USP11-201ENST00000218348 AGPSO00116 658 aa10.66□□□□□ -0.7
USP11-201ENST00000218348 B4GALT5O43286 388 aa10.66□□□□□ -0.7
USP11-201ENST00000218348 TMEM253P0C7T8 217 aa10.66□□□□□ -0.7
USP11-201ENST00000218348 PEX19P40855 299 aa10.66□□□□□ -0.7
USP11-201ENST00000218348 TUBB4BP68371 445 aa10.66□□□□□ -0.7
USP11-201ENST00000218348 TFAMQ00059 246 aaKnown RBP10.66□□□□□ -0.7
USP11-201ENST00000218348 KIF22Q14807 665 aa10.66□□□□□ -0.7
USP11-201ENST00000218348 NFIL3Q16649 462 aa10.66□□□□□ -0.7
USP11-201ENST00000218348 MORC4Q8TE76 937 aa10.66□□□□□ -0.7
USP11-201ENST00000218348 GTF3C2Q8WUA4 911 aaPredicted RBP10.66□□□□□ -0.7
USP11-201ENST00000218348 ACBD3Q9H3P7 528 aa10.66□□□□□ -0.7
USP11-201ENST00000218348 KLHL11Q9NVR0 708 aa10.66□□□□□ -0.7
USP11-201ENST00000218348 FBXL5Q9UKA1 691 aa10.66□□□□□ -0.7
USP11-201ENST00000218348 PCDHB4Q9Y5E5 795 aa10.66□□□□□ -0.7
USP11-201ENST00000218348 ANKRD62A6NC57 917 aa10.66□□□□□ -0.7
USP11-201ENST00000218348 PYGLP06737 847 aa10.66□□□□□ -0.7
USP11-201ENST00000218348 KRT19P08727 400 aa10.66□□□□□ -0.7
USP11-201ENST00000218348 TXNP10599 105 aaKnown RBP10.66□□□□□ -0.7
USP11-201ENST00000218348 MCM3P25205 808 aa10.66□□□□□ -0.7
USP11-201ENST00000218348 WDR44Q5JSH3 913 aa10.66□□□□□ -0.7
USP11-201ENST00000218348 MORN1Q5T089 497 aa10.66□□□□□ -0.7
USP11-201ENST00000218348 CHST13Q8NET6 341 aa10.66□□□□□ -0.7
USP11-201ENST00000218348 AENQ8WTP8 325 aaKnown RBP10.66□□□□□ -0.7
USP11-201ENST00000218348 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.66□□□□□ -0.72e-7■□□□□ 10.8
USP11-201ENST00000218348 NEUROG2Q9H2A3 272 aa10.66□□□□□ -0.7
USP11-201ENST00000218348 VPS41P49754 854 aa10.65□□□□□ -0.7
USP11-201ENST00000218348 GPC5P78333 572 aa10.65□□□□□ -0.7
USP11-201ENST00000218348 SF3A3Q12874 501 aaKnown RBP eCLIP10.65□□□□□ -0.73e-6■■■■■ 41.4
USP11-201ENST00000218348 USP4Q13107 963 aa10.65□□□□□ -0.7
USP11-201ENST00000218348 CYFIP2Q96F07 1278 aa10.65□□□□□ -0.7
USP11-201ENST00000218348 PARK7Q99497 189 aaKnown RBP10.65□□□□□ -0.7
USP11-201ENST00000218348 MMP19Q99542 508 aa10.65□□□□□ -0.7
USP11-201ENST00000218348 C11orf70Q9BRQ4 267 aa10.65□□□□□ -0.7
USP11-201ENST00000218348 UBXN6Q9BZV1 441 aa10.65□□□□□ -0.7
USP11-201ENST00000218348 ARHGAP28Q9P2N2 729 aa10.65□□□□□ -0.7
USP11-201ENST00000218348 NXF1Q9UBU9 619 aaKnown RBP10.65□□□□□ -0.7
USP11-201ENST00000218348 CNOT8Q9UFF9 292 aaKnown RBP10.65□□□□□ -0.7
USP11-201ENST00000218348 GJD2Q9UKL4 321 aa10.65□□□□□ -0.7
USP11-201ENST00000218348 CLDN3O15551 220 aa10.65□□□□□ -0.7
USP11-201ENST00000218348 DKC1O60832 514 aaKnown RBP eCLIP10.65□□□□□ -0.7
USP11-201ENST00000218348 CST3P01034 146 aaPredicted RBP10.65□□□□□ -0.7
USP11-201ENST00000218348 WEE2P0C1S8 567 aa10.65□□□□□ -0.7
USP11-201ENST00000218348 GCLCP48506 637 aaPredicted RBP10.65□□□□□ -0.7
USP11-201ENST00000218348 TMEM62Q0P6H9 643 aa10.65□□□□□ -0.7
USP11-201ENST00000218348 BRDTQ58F21 947 aaPredicted RBP10.65□□□□□ -0.7
USP11-201ENST00000218348 XRRA1Q6P2D8 792 aa10.65□□□□□ -0.7
USP11-201ENST00000218348 FAM71AQ8IYT1 594 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms