RNA–Protein interactions for RNA: ENST00000216513.4

SIX4-201, Transcript of SIX homeobox 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX4, Length 6,285 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-201ENST00000216513 CCDC85BQ15834 202 aaPredicted RBP14.56□□□□□ -0.08
SIX4-201ENST00000216513 HABP4Q5JVS0 413 aaKnown RBP14.56□□□□□ -0.08
SIX4-201ENST00000216513 RASGRP2Q7LDG7 609 aa14.56□□□□□ -0.08
SIX4-201ENST00000216513 NHEJ1Q9H9Q4 299 aaPredicted RBP14.56□□□□□ -0.08
SIX4-201ENST00000216513 AGO4Q9HCK5 861 aaKnown RBP14.56□□□□□ -0.08
SIX4-201ENST00000216513 ADGRB1O14514 1584 aa14.56□□□□□ -0.08
SIX4-201ENST00000216513 UBR1Q8IWV7 1749 aa14.56□□□□□ -0.08
SIX4-201ENST00000216513 ZBTB48P10074 688 aaPredicted RBP14.56□□□□□ -0.08
SIX4-201ENST00000216513 PAMP19021 973 aa14.56□□□□□ -0.08
SIX4-201ENST00000216513 SLC26A2P50443 739 aa14.56□□□□□ -0.08
SIX4-201ENST00000216513 OAZ1P54368 228 aa14.56□□□□□ -0.08
SIX4-201ENST00000216513 CACUL1Q86Y37 369 aa14.56□□□□□ -0.08
SIX4-201ENST00000216513 FAM114A2Q9NRY5 505 aa14.56□□□□□ -0.08
SIX4-201ENST00000216513 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.56□□□□□ -0.08
SIX4-201ENST00000216513 TLK1Q9UKI8 766 aa14.56□□□□□ -0.08
SIX4-201ENST00000216513 ASTN2O75129 1339 aaPredicted RBP14.56□□□□□ -0.08
SIX4-201ENST00000216513 PXDNLA1KZ92 1463 aa14.56□□□□□ -0.08
SIX4-201ENST00000216513 ANKRD40Q6AI12 368 aa14.56□□□□□ -0.08
SIX4-201ENST00000216513 SRPK1Q96SB4 655 aaKnown RBP14.56□□□□□ -0.08
SIX4-201ENST00000216513 ADAMTS1Q9UHI8 967 aa14.56□□□□□ -0.08
SIX4-201ENST00000216513 NWD1Q149M9 1564 aa14.56□□□□□ -0.08
SIX4-201ENST00000216513 FGBP02675 491 aa14.56□□□□□ -0.08
SIX4-201ENST00000216513 SLURP2P0DP57 97 aa14.56□□□□□ -0.08
SIX4-201ENST00000216513 DRAP1Q14919 205 aaPredicted RBP14.56□□□□□ -0.08
SIX4-201ENST00000216513 MAPRE1Q15691 268 aaKnown RBP14.56□□□□□ -0.08
SIX4-201ENST00000216513 REPS2Q8NFH8 660 aa14.56□□□□□ -0.08
SIX4-201ENST00000216513 USP33Q8TEY7 942 aa14.56□□□□□ -0.08
SIX4-201ENST00000216513 HTRA3P83110 453 aa14.55□□□□□ -0.08
SIX4-201ENST00000216513 TWF1Q12792 350 aa14.55□□□□□ -0.08
SIX4-201ENST00000216513 RBBP5Q15291 538 aaKnown RBP14.55□□□□□ -0.08
SIX4-201ENST00000216513 PPP4R4Q6NUP7 873 aa14.55□□□□□ -0.08
SIX4-201ENST00000216513 PPFIBP2Q8ND30 876 aa14.55□□□□□ -0.08
SIX4-201ENST00000216513 MED15Q96RN5 788 aa14.55□□□□□ -0.08
SIX4-201ENST00000216513 ITIH6Q6UXX5 1313 aa14.55□□□□□ -0.08
SIX4-201ENST00000216513 ROBO1Q9Y6N7 1651 aa14.55□□□□□ -0.08
SIX4-201ENST00000216513 NCAM1P13591 858 aa14.55□□□□□ -0.08
SIX4-201ENST00000216513 ERFP50548 548 aa14.55□□□□□ -0.08
SIX4-201ENST00000216513 RAB27AP51159 221 aa14.55□□□□□ -0.08
SIX4-201ENST00000216513 ORC1Q13415 861 aa14.55□□□□□ -0.08
SIX4-201ENST00000216513 CARNMT1Q8N4J0 409 aa14.55□□□□□ -0.08
SIX4-201ENST00000216513 USP27XA6NNY8 438 aa14.55□□□□□ -0.08
SIX4-201ENST00000216513 TGFB3P10600 412 aa14.55□□□□□ -0.08
SIX4-201ENST00000216513 AKT1P31749 480 aa14.55□□□□□ -0.08
SIX4-201ENST00000216513 ETFBP38117 255 aa14.55□□□□□ -0.08
SIX4-201ENST00000216513 SATB1Q01826 763 aa14.55□□□□□ -0.08
SIX4-201ENST00000216513 CATSPER3Q86XQ3 398 aa14.55□□□□□ -0.08
SIX4-201ENST00000216513 DDI1Q8WTU0 396 aa14.55□□□□□ -0.08
SIX4-201ENST00000216513 ZNF558Q96NG5 402 aa14.55□□□□□ -0.08
SIX4-201ENST00000216513 MRPL17Q9NRX2 175 aaKnown RBP14.55□□□□□ -0.08
SIX4-201ENST00000216513 UBA6A0AVT1 1052 aaPredicted RBP14.55□□□□□ -0.08
SIX4-201ENST00000216513 PPFIA4O75335 1185 aa14.55□□□□□ -0.08
SIX4-201ENST00000216513 PRKCZQ05513 592 aa14.55□□□□□ -0.08
SIX4-201ENST00000216513 BBOF1Q8ND07 529 aa14.55□□□□□ -0.08
SIX4-201ENST00000216513 ZMYND12Q9H0C1 365 aa14.55□□□□□ -0.08
SIX4-201ENST00000216513 RASSF4Q9H2L5 321 aa14.55□□□□□ -0.08
SIX4-201ENST00000216513 MAP2P11137 1827 aaKnown RBP14.55□□□□□ -0.08
SIX4-201ENST00000216513 USP2O75604 605 aaPredicted RBP14.55□□□□□ -0.08
SIX4-201ENST00000216513 HOXA7P31268 230 aaPredicted RBP14.55□□□□□ -0.08
SIX4-201ENST00000216513 CCT5P48643 541 aa14.55□□□□□ -0.08
SIX4-201ENST00000216513 RPL10AP62906 217 aaKnown RBP14.55□□□□□ -0.08
SIX4-201ENST00000216513 LAMTOR4Q0VGL1 99 aa14.55□□□□□ -0.08
SIX4-201ENST00000216513 ARMC6Q6NXE6 501 aa14.55□□□□□ -0.08
SIX4-201ENST00000216513 PRR23CQ6ZRP0 262 aa14.55□□□□□ -0.08
SIX4-201ENST00000216513 PROM2Q8N271 834 aa14.55□□□□□ -0.08
SIX4-201ENST00000216513 DEPDC1BQ8WUY9 529 aa14.55□□□□□ -0.08
SIX4-201ENST00000216513 DEPDC5O75140 1603 aa14.54□□□□□ -0.08
SIX4-201ENST00000216513 CYP26A1O43174 497 aa14.54□□□□□ -0.08
SIX4-201ENST00000216513 AP1G2O75843 785 aa14.54□□□□□ -0.08
SIX4-201ENST00000216513 SFSWAPQ12872 951 aaKnown RBP14.54□□□□□ -0.08
SIX4-201ENST00000216513 ELAVL2Q12926 359 aaKnown RBP14.54□□□□□ -0.08
SIX4-201ENST00000216513 FAM133BQ5BKY9 247 aaKnown RBP14.54□□□□□ -0.08
SIX4-201ENST00000216513 RGL4Q8IZJ4 473 aa14.54□□□□□ -0.08
SIX4-201ENST00000216513 ATP8B4Q8TF62 1192 aa14.54□□□□□ -0.08
SIX4-201ENST00000216513 ANTXR2P58335 489 aa14.54□□□□□ -0.08
SIX4-201ENST00000216513 GFPT1Q06210 699 aaPredicted RBP14.54□□□□□ -0.08
SIX4-201ENST00000216513 CCDC62Q6P9F0 684 aa14.54□□□□□ -0.08
SIX4-201ENST00000216513 RNF25Q96BH1 459 aaPredicted RBP14.54□□□□□ -0.08
SIX4-201ENST00000216513 EXTL3O43909 919 aa14.54□□□□□ -0.08
SIX4-201ENST00000216513 LGALS2P05162 132 aa14.54□□□□□ -0.08
SIX4-201ENST00000216513 RPSAP08865 295 aaKnown RBP14.54□□□□□ -0.08
SIX4-201ENST00000216513 DRP2Q13474 957 aa14.54□□□□□ -0.08
SIX4-201ENST00000216513 DCAF6Q58WW2 860 aa14.54□□□□□ -0.08
SIX4-201ENST00000216513 TRPV6Q9H1D0 765 aa14.54□□□□□ -0.08
SIX4-201ENST00000216513 EPB41L3Q9Y2J2 1087 aaPredicted RBP14.54□□□□□ -0.08
SIX4-201ENST00000216513 YDJCA8MPS7 323 aa14.54□□□□□ -0.08
SIX4-201ENST00000216513 NVLO15381 856 aaKnown RBP14.54□□□□□ -0.08
SIX4-201ENST00000216513 SLC37A4O43826 429 aa14.54□□□□□ -0.08
SIX4-201ENST00000216513 EXOSC10Q01780 885 aaKnown RBP14.54□□□□□ -0.08
SIX4-201ENST00000216513 ZNF211Q13398 564 aaPredicted RBP14.54□□□□□ -0.08
SIX4-201ENST00000216513 SPOPLQ6IQ16 392 aa14.54□□□□□ -0.08
SIX4-201ENST00000216513 SERPIND1P05546 499 aa14.54□□□□□ -0.08
SIX4-201ENST00000216513 KRT31Q15323 416 aa14.54□□□□□ -0.08
SIX4-201ENST00000216513 SYTL3Q4VX76 610 aa14.54□□□□□ -0.08
SIX4-201ENST00000216513 ALKBH5Q6P6C2 394 aaKnown RBP14.54□□□□□ -0.08
SIX4-201ENST00000216513 TRIM48Q8IWZ4 208 aa14.54□□□□□ -0.08
SIX4-201ENST00000216513 EFHBQ8N7U6 833 aa14.54□□□□□ -0.08
SIX4-201ENST00000216513 GIPC2Q8TF65 315 aa14.54□□□□□ -0.08
SIX4-201ENST00000216513 ARNTL2Q8WYA1 636 aa14.54□□□□□ -0.08
SIX4-201ENST00000216513 RABGGTAQ92696 567 aa14.54□□□□□ -0.08
SIX4-201ENST00000216513 CDY2AQ9Y6F7 541 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms