RNA–Protein interactions for RNA: ENSMUST00000109543.8

Vcan-201, Transcript of Versican core protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Vcan, Length 2,321 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vcan-201ENSMUST00000109543 Slc12a6Q924N4 1150 aa16.57■□□□□ 0.24
Vcan-201ENSMUST00000109543 PawrQ925B0 333 aa16.57■□□□□ 0.24
Vcan-201ENSMUST00000109543 Mov10l1Q99MV5 1187 aa16.57■□□□□ 0.24
Vcan-201ENSMUST00000109543 Tmem206Q9D771 350 aa16.57■□□□□ 0.24
Vcan-201ENSMUST00000109543 6030498E09RikB1AX85 169 aa16.56■□□□□ 0.24
Vcan-201ENSMUST00000109543 Hsf3D0VYS2 492 aa16.56■□□□□ 0.24
Vcan-201ENSMUST00000109543 FlgP11088 336 aa16.56■□□□□ 0.24
Vcan-201ENSMUST00000109543 Krt19P19001 403 aa16.56■□□□□ 0.24
Vcan-201ENSMUST00000109543 Frg1P97376 258 aaKnown RBP16.56■□□□□ 0.24
Vcan-201ENSMUST00000109543 NfiaQ02780 532 aa16.56■□□□□ 0.24
Vcan-201ENSMUST00000109543 Pou6f1Q07916 301 aa16.56■□□□□ 0.24
Vcan-201ENSMUST00000109543 ZufspQ3T9Z9 577 aa16.56■□□□□ 0.24
Vcan-201ENSMUST00000109543 Klra3Q64329 266 aa16.56■□□□□ 0.24
Vcan-201ENSMUST00000109543 Olfr395Q8VGR3 312 aa16.56■□□□□ 0.24
Vcan-201ENSMUST00000109543 Ftsj3Q9DBE9 838 aaKnown RBP16.56■□□□□ 0.24
Vcan-201ENSMUST00000109543 Dkc1Q9ESX5 509 aaKnown RBP16.56■□□□□ 0.24
Vcan-201ENSMUST00000109543 Myo5aQ99104 1853 aaKnown RBP16.56■□□□□ 0.24
Vcan-201ENSMUST00000109543 Trip11E9Q512 1976 aa16.56■□□□□ 0.24
Vcan-201ENSMUST00000109543 Birc5O70201 140 aa16.56■□□□□ 0.24
Vcan-201ENSMUST00000109543 Fam107bQ3TGF2 131 aa16.56■□□□□ 0.24
Vcan-201ENSMUST00000109543 Vps41Q5KU39 853 aa16.56■□□□□ 0.24
Vcan-201ENSMUST00000109543 FAM120AQ6A0A9 1112 aaKnown RBP16.56■□□□□ 0.24
Vcan-201ENSMUST00000109543 Vat1lQ80TB8 417 aa16.56■□□□□ 0.24
Vcan-201ENSMUST00000109543 FktnQ8R507 461 aa16.56■□□□□ 0.24
Vcan-201ENSMUST00000109543 Zcchc8Q9CYA6 709 aaKnown RBP16.56■□□□□ 0.24
Vcan-201ENSMUST00000109543 Cables1Q9ESJ1 568 aa16.56■□□□□ 0.24
Vcan-201ENSMUST00000109543 Stat2Q9WVL2 923 aa16.56■□□□□ 0.24
Vcan-201ENSMUST00000109543 TroapB7ZNG4 668 aa16.55■□□□□ 0.24
Vcan-201ENSMUST00000109543 Efna5O08543 228 aa16.55■□□□□ 0.24
Vcan-201ENSMUST00000109543 ZfxP17012 799 aa16.55■□□□□ 0.24
Vcan-201ENSMUST00000109543 Akr1b8P45377 316 aa16.55■□□□□ 0.24
Vcan-201ENSMUST00000109543 PrkcbP68404 671 aa16.55■□□□□ 0.24
Vcan-201ENSMUST00000109543 Bpifb5Q3UQ05 490 aa16.55■□□□□ 0.24
Vcan-201ENSMUST00000109543 Kctd16Q5DTY9 427 aa16.55■□□□□ 0.24
Vcan-201ENSMUST00000109543 Myl6Q60605 151 aaKnown RBP16.55■□□□□ 0.24
Vcan-201ENSMUST00000109543 Tll1Q62381 1013 aa16.55■□□□□ 0.24
Vcan-201ENSMUST00000109543 Trpv1Q704Y3 839 aa16.55■□□□□ 0.24
Vcan-201ENSMUST00000109543 Ppfia2Q8BSS9 1257 aa16.55■□□□□ 0.24
Vcan-201ENSMUST00000109543 Fam118bQ8C569 351 aa16.55■□□□□ 0.24
Vcan-201ENSMUST00000109543 IrgqQ8VIM9 583 aa16.55■□□□□ 0.24
Vcan-201ENSMUST00000109543 1700129C05RikQ9CQ77 218 aa16.55■□□□□ 0.24
Vcan-201ENSMUST00000109543 Tacc3Q9JJ11 631 aa16.55■□□□□ 0.24
Vcan-201ENSMUST00000109543 Ptgdr2Q9Z2J6 382 aa16.55■□□□□ 0.24
Vcan-201ENSMUST00000109543 Lrrc63A6H694 637 aa16.54■□□□□ 0.24
Vcan-201ENSMUST00000109543 Olfr456B2RT27 312 aa16.54■□□□□ 0.24
Vcan-201ENSMUST00000109543 Ptp4a2O70274 167 aa16.54■□□□□ 0.24
Vcan-201ENSMUST00000109543 Marcksl1P28667 200 aa16.54■□□□□ 0.24
Vcan-201ENSMUST00000109543 Hmgcs2P54869 508 aa16.54■□□□□ 0.24
Vcan-201ENSMUST00000109543 RalaP63321 206 aa16.54■□□□□ 0.24
Vcan-201ENSMUST00000109543 Ireb2Q811J3 963 aaKnown RBP16.54■□□□□ 0.24
Vcan-201ENSMUST00000109543 Tph2Q8CGV2 488 aa16.54■□□□□ 0.24
Vcan-201ENSMUST00000109543 Olfr458Q8VF80 313 aa16.54■□□□□ 0.24
Vcan-201ENSMUST00000109543 Olfr457Q8VGP5 313 aa16.54■□□□□ 0.24
Vcan-201ENSMUST00000109543 Pcdha9Q91Y11 979 aa16.54■□□□□ 0.24
Vcan-201ENSMUST00000109543 Psma8Q9CWH6 250 aa16.54■□□□□ 0.24
Vcan-201ENSMUST00000109543 Coro7Q9D2V7 922 aa16.54■□□□□ 0.24
Vcan-201ENSMUST00000109543 Limd1Q9QXD8 668 aa16.54■□□□□ 0.24
Vcan-201ENSMUST00000109543 CtsfQ9R013 462 aa16.54■□□□□ 0.24
Vcan-201ENSMUST00000109543 Cdr2lA2A6T1 465 aa16.54■□□□□ 0.24
Vcan-201ENSMUST00000109543 Kiaa1522A2A7S8 1013 aa16.54■□□□□ 0.24
Vcan-201ENSMUST00000109543 Cops5O35864 334 aa16.54■□□□□ 0.24
Vcan-201ENSMUST00000109543 Tdpoz2Q717B2 364 aa16.54■□□□□ 0.24
Vcan-201ENSMUST00000109543 Elac2Q80Y81 831 aaKnown RBP16.54■□□□□ 0.24
Vcan-201ENSMUST00000109543 Tmem145Q8C4U2 746 aa16.54■□□□□ 0.24
Vcan-201ENSMUST00000109543 Tti1Q91V83 1085 aa16.54■□□□□ 0.24
Vcan-201ENSMUST00000109543 Spns2Q91VM4 549 aa16.54■□□□□ 0.24
Vcan-201ENSMUST00000109543 Nfu1Q9QZ23 255 aa16.54■□□□□ 0.24
Vcan-201ENSMUST00000109543 Klrc2Q9WTJ9 238 aa16.54■□□□□ 0.24
Vcan-201ENSMUST00000109543 Orc1Q9Z1N2 840 aaKnown RBP16.54■□□□□ 0.24
Vcan-201ENSMUST00000109543 Atad5Q4QY64 1826 aa16.54■□□□□ 0.24
Vcan-201ENSMUST00000109543 Gm10801F7C7Q0 168 aa16.53■□□□□ 0.24
Vcan-201ENSMUST00000109543 Nat8lQ3UGX3 299 aa16.53■□□□□ 0.24
Vcan-201ENSMUST00000109543 Ddx49Q4FZF3 480 aaKnown RBP16.53■□□□□ 0.24
Vcan-201ENSMUST00000109543 TwistnbQ78WZ7 330 aaKnown RBP16.53■□□□□ 0.24
Vcan-201ENSMUST00000109543 Zbtb5Q7TQG0 670 aa16.53■□□□□ 0.24
Vcan-201ENSMUST00000109543 Phf8Q80TJ7 1023 aa16.53■□□□□ 0.24
Vcan-201ENSMUST00000109543 Rhot1Q8BG51 631 aa16.53■□□□□ 0.24
Vcan-201ENSMUST00000109543 Sulf1Q8K007 870 aa16.53■□□□□ 0.24
Vcan-201ENSMUST00000109543 Slc35f6Q8VE96 372 aa16.53■□□□□ 0.24
Vcan-201ENSMUST00000109543 Caskin2Q8VHK1 1201 aa16.53■□□□□ 0.24
Vcan-201ENSMUST00000109543 Smyd3Q9CWR2 428 aa16.53■□□□□ 0.24
Vcan-201ENSMUST00000109543 Slc26a3Q9WVC8 757 aa16.53■□□□□ 0.24
Vcan-201ENSMUST00000109543 Nr3c1P06537 783 aa16.53■□□□□ 0.24
Vcan-201ENSMUST00000109543 Ccnd3P30282 292 aa16.53■□□□□ 0.24
Vcan-201ENSMUST00000109543 Cbx2P30658 519 aa16.53■□□□□ 0.24
Vcan-201ENSMUST00000109543 CiitaP79621 1155 aa16.53■□□□□ 0.24
Vcan-201ENSMUST00000109543 Rrp36Q3UFY0 244 aaKnown RBP16.53■□□□□ 0.24
Vcan-201ENSMUST00000109543 Cd180Q62192 661 aa16.53■□□□□ 0.24
Vcan-201ENSMUST00000109543 Senp5Q6NXL6 749 aa16.53■□□□□ 0.24
Vcan-201ENSMUST00000109543 Prdm4Q80V63 803 aa16.53■□□□□ 0.24
Vcan-201ENSMUST00000109543 RimklbQ80WS1 387 aa16.53■□□□□ 0.24
Vcan-201ENSMUST00000109543 Enoph1Q8BGB7 257 aa16.53■□□□□ 0.24
Vcan-201ENSMUST00000109543 Slc7a14Q8BXR1 771 aa16.53■□□□□ 0.24
Vcan-201ENSMUST00000109543 Efl1Q8C0D5 1127 aa16.53■□□□□ 0.24
Vcan-201ENSMUST00000109543 OgtQ8CGY8 1046 aa16.53■□□□□ 0.24
Vcan-201ENSMUST00000109543 Plcb4Q91UZ1 1175 aa16.53■□□□□ 0.24
Vcan-201ENSMUST00000109543 Xpo5Q924C1 1204 aaKnown RBP16.53■□□□□ 0.24
Vcan-201ENSMUST00000109543 Ecel1Q9JMI0 775 aa16.53■□□□□ 0.24
Vcan-201ENSMUST00000109543 Gadd45gQ9Z111 159 aa16.53■□□□□ 0.24
Vcan-201ENSMUST00000109543 Gm5926E9PWJ8 236 aa16.52■□□□□ 0.24
Retrieved 100 of 22,080 RNA–protein pairs in 57.4 ms