RNA–Protein interactions for RNA: ENSMUST00000106035.7

Ccdc28b-202, Transcript of Coiled-coil domain-containing protein 28B, mousemouse

TSL 1 (best) BASIC

Gene Ccdc28b, Length 821 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28b-202ENSMUST00000106035 Q9D1F3 157 aa13.28□□□□□ -0.28
Ccdc28b-202ENSMUST00000106035 TnmdQ9EP64 317 aa13.28□□□□□ -0.28
Ccdc28b-202ENSMUST00000106035 GabrqQ9JLF1 638 aa13.28□□□□□ -0.28
Ccdc28b-202ENSMUST00000106035 Lilra6A0A0B4J1F3 663 aa13.27□□□□□ -0.29
Ccdc28b-202ENSMUST00000106035 Klhdc7bA0A286YD60 1263 aa13.27□□□□□ -0.29
Ccdc28b-202ENSMUST00000106035 Gm7168A0AUV4 508 aa13.27□□□□□ -0.29
Ccdc28b-202ENSMUST00000106035 Arhgef37A1IGU4 676 aa13.27□□□□□ -0.29
Ccdc28b-202ENSMUST00000106035 Cyp2b13A6H6J2 491 aa13.27□□□□□ -0.29
Ccdc28b-202ENSMUST00000106035 Gm10801F7C7Q0 168 aa13.27□□□□□ -0.29
Ccdc28b-202ENSMUST00000106035 Scrg1O88745 98 aa13.27□□□□□ -0.29
Ccdc28b-202ENSMUST00000106035 Adcy7P51829 1099 aa13.27□□□□□ -0.29
Ccdc28b-202ENSMUST00000106035 LxnP70202 222 aa13.27□□□□□ -0.29
Ccdc28b-202ENSMUST00000106035 Arhgef16Q3U5C8 713 aa13.27□□□□□ -0.29
Ccdc28b-202ENSMUST00000106035 Tmem164Q6PHN7 296 aa13.27□□□□□ -0.29
Ccdc28b-202ENSMUST00000106035 Arhgap26Q6ZQ82 814 aa13.27□□□□□ -0.29
Ccdc28b-202ENSMUST00000106035 TbataQ7TSD4 393 aa13.27□□□□□ -0.29
Ccdc28b-202ENSMUST00000106035 RimklbQ80WS1 387 aa13.27□□□□□ -0.29
Ccdc28b-202ENSMUST00000106035 Wscd1Q80XH4 572 aa13.27□□□□□ -0.29
Ccdc28b-202ENSMUST00000106035 Zkscan1Q8BGS3 561 aaKnown RBP13.27□□□□□ -0.29
Ccdc28b-202ENSMUST00000106035 Abraxas1Q8BPZ8 407 aa13.27□□□□□ -0.29
Ccdc28b-202ENSMUST00000106035 Vmn1r213Q8R278 384 aa13.27□□□□□ -0.29
Ccdc28b-202ENSMUST00000106035 SarafQ8R3Q0 334 aa13.27□□□□□ -0.29
Ccdc28b-202ENSMUST00000106035 Tbc1d22aQ8R5A6 516 aa13.27□□□□□ -0.29
Ccdc28b-202ENSMUST00000106035 Mdm1Q9D067 708 aa13.27□□□□□ -0.29
Ccdc28b-202ENSMUST00000106035 Q9D2Q3 444 aa13.27□□□□□ -0.29
Ccdc28b-202ENSMUST00000106035 Tubgcp4Q9D4F8 667 aa13.27□□□□□ -0.29
Ccdc28b-202ENSMUST00000106035 Lman2Q9DBH5 358 aaKnown RBP13.27□□□□□ -0.29
Ccdc28b-202ENSMUST00000106035 Mx2Q9WVP9 655 aa13.27□□□□□ -0.29
Ccdc28b-202ENSMUST00000106035 ZxdbA2CE44 873 aa13.26□□□□□ -0.29
Ccdc28b-202ENSMUST00000106035 Gm13212B1ASQ7 799 aa13.26□□□□□ -0.29
Ccdc28b-202ENSMUST00000106035 Mki67E9PVX6 3177 aaKnown RBP13.26□□□□□ -0.29
Ccdc28b-202ENSMUST00000106035 Apol10bG3X9K7 334 aa13.26□□□□□ -0.29
Ccdc28b-202ENSMUST00000106035 Terf2O35144 541 aa13.26□□□□□ -0.29
Ccdc28b-202ENSMUST00000106035 Cyp2c65Q148B1 490 aa13.26□□□□□ -0.29
Ccdc28b-202ENSMUST00000106035 Nlrp4cQ3TKR3 982 aa13.26□□□□□ -0.29
Ccdc28b-202ENSMUST00000106035 Nek10Q3UGM2 1111 aa13.26□□□□□ -0.29
Ccdc28b-202ENSMUST00000106035 GstcdQ5RL51 634 aa13.26□□□□□ -0.29
Ccdc28b-202ENSMUST00000106035 CochQ62507 552 aa13.26□□□□□ -0.29
Ccdc28b-202ENSMUST00000106035 Arl5cQ6P068 179 aa13.26□□□□□ -0.29
Ccdc28b-202ENSMUST00000106035 Prpf38bQ80SY5 542 aaKnown RBP13.26□□□□□ -0.29
Ccdc28b-202ENSMUST00000106035 Zbtb49Q8BXX2 756 aa13.26□□□□□ -0.29
Ccdc28b-202ENSMUST00000106035 Def6Q8C2K1 630 aa13.26□□□□□ -0.29
Ccdc28b-202ENSMUST00000106035 Lamtor4Q8CF66 99 aa13.26□□□□□ -0.29
Ccdc28b-202ENSMUST00000106035 Rtn4rl1Q8K0S5 445 aa13.26□□□□□ -0.29
Ccdc28b-202ENSMUST00000106035 MymkQ9D1N4 221 aa13.26□□□□□ -0.29
Ccdc28b-202ENSMUST00000106035 Prl2b1Q9DAZ2 228 aa13.26□□□□□ -0.29
Ccdc28b-202ENSMUST00000106035 Pkd2l2Q9JLG4 621 aa13.26□□□□□ -0.29
Ccdc28b-202ENSMUST00000106035 Dnajc12Q9R022 198 aa13.26□□□□□ -0.29
Ccdc28b-202ENSMUST00000106035 Kcnh3Q9WVJ0 1095 aa13.26□□□□□ -0.29
Ccdc28b-202ENSMUST00000106035 Gm12695A2AGB2 545 aa13.25□□□□□ -0.29
Ccdc28b-202ENSMUST00000106035 Rsph10bE9PYQ0 876 aa13.25□□□□□ -0.29
Ccdc28b-202ENSMUST00000106035 Stk10O55098 966 aa13.25□□□□□ -0.29
Ccdc28b-202ENSMUST00000106035 Eif3dO70194 548 aaKnown RBP13.25□□□□□ -0.29
Ccdc28b-202ENSMUST00000106035 Lrrc4bP0C192 709 aa13.25□□□□□ -0.29
Ccdc28b-202ENSMUST00000106035 Irf8P23611 424 aa13.25□□□□□ -0.29
Ccdc28b-202ENSMUST00000106035 Hoxd12P23812 268 aa13.25□□□□□ -0.29
Ccdc28b-202ENSMUST00000106035 SnrpfP62307 86 aaKnown RBP13.25□□□□□ -0.29
Ccdc28b-202ENSMUST00000106035 Prss55Q14BX2 321 aa13.25□□□□□ -0.29
Ccdc28b-202ENSMUST00000106035 Usp28Q5I043 1051 aa13.25□□□□□ -0.29
Ccdc28b-202ENSMUST00000106035 Hsf5Q5ND04 624 aa13.25□□□□□ -0.29
Ccdc28b-202ENSMUST00000106035 Ppp1r9bQ6R891 817 aaKnown RBP13.25□□□□□ -0.29
Ccdc28b-202ENSMUST00000106035 Znf579Q80VM4 562 aa13.25□□□□□ -0.29
Ccdc28b-202ENSMUST00000106035 Liat1Q810M6 228 aa13.25□□□□□ -0.29
Ccdc28b-202ENSMUST00000106035 Ctdspl2Q8BG15 465 aa13.25□□□□□ -0.29
Ccdc28b-202ENSMUST00000106035 Ccdc122Q8BVN0 290 aa13.25□□□□□ -0.29
Ccdc28b-202ENSMUST00000106035 Pdcd2lQ8C5N5 364 aa13.25□□□□□ -0.29
Ccdc28b-202ENSMUST00000106035 Spata32Q8C5V0 334 aa13.25□□□□□ -0.29
Ccdc28b-202ENSMUST00000106035 Lrrc41Q8K1C9 807 aa13.25□□□□□ -0.29
Ccdc28b-202ENSMUST00000106035 Scn1aA2APX8 2009 aa13.24□□□□□ -0.29
Ccdc28b-202ENSMUST00000106035 Ccdc112A0AUP1 442 aa13.24□□□□□ -0.29
Ccdc28b-202ENSMUST00000106035 Ces1bD3Z5G7 567 aa13.24□□□□□ -0.29
Ccdc28b-202ENSMUST00000106035 Gm3642K7N6V4 267 aa13.24□□□□□ -0.29
Ccdc28b-202ENSMUST00000106035 Oas1aP11928 367 aa13.24□□□□□ -0.29
Ccdc28b-202ENSMUST00000106035 Zdhhc9P59268 364 aa13.24□□□□□ -0.29
Ccdc28b-202ENSMUST00000106035 YwhahP68510 246 aaKnown RBP13.24□□□□□ -0.29
Ccdc28b-202ENSMUST00000106035 VegfaQ00731 214 aa13.24□□□□□ -0.29
Ccdc28b-202ENSMUST00000106035 Ndst1Q3UHN9 882 aa13.24□□□□□ -0.29
Ccdc28b-202ENSMUST00000106035 Arhgap30Q640N3 1101 aa13.24□□□□□ -0.29
Ccdc28b-202ENSMUST00000106035 Mysm1Q69Z66 819 aa13.24□□□□□ -0.29
Ccdc28b-202ENSMUST00000106035 Cfap97Q6ZPR1 541 aa13.24□□□□□ -0.29
Ccdc28b-202ENSMUST00000106035 Kcnk12Q76M80 430 aa13.24□□□□□ -0.29
Ccdc28b-202ENSMUST00000106035 Rspry1Q8BVR6 576 aa13.24□□□□□ -0.29
Ccdc28b-202ENSMUST00000106035 Unc45bQ8CGY6 931 aaKnown RBP13.24□□□□□ -0.29
Ccdc28b-202ENSMUST00000106035 Oas1gQ8K469 367 aa13.24□□□□□ -0.29
Ccdc28b-202ENSMUST00000106035 Sfxn1Q99JR1 322 aa13.24□□□□□ -0.29
Ccdc28b-202ENSMUST00000106035 NonoQ99K48 473 aaKnown RBP13.24□□□□□ -0.29
Ccdc28b-202ENSMUST00000106035 Ears2Q9CXJ1 523 aa13.24□□□□□ -0.29
Ccdc28b-202ENSMUST00000106035 Ribc1Q9D0B8 379 aa13.24□□□□□ -0.29
Ccdc28b-202ENSMUST00000106035 Ccdc105Q9D4K7 499 aa13.24□□□□□ -0.29
Ccdc28b-202ENSMUST00000106035 PrameQ9D4Z5 464 aa13.24□□□□□ -0.29
Ccdc28b-202ENSMUST00000106035 Polr2dQ9D7M8 142 aaKnown RBP13.24□□□□□ -0.29
Ccdc28b-202ENSMUST00000106035 Pebp4Q9D9G2 242 aa13.24□□□□□ -0.29
Ccdc28b-202ENSMUST00000106035 Cog8Q9JJA2 640 aa13.24□□□□□ -0.29
Ccdc28b-202ENSMUST00000106035 C1qtnf1Q9QXP7 281 aa13.24□□□□□ -0.29
Ccdc28b-202ENSMUST00000106035 Igkv16-104A0A0B4J1I1 116 aa13.23□□□□□ -0.29
Ccdc28b-202ENSMUST00000106035 Gm43638A0A0J9YU36 694 aa13.23□□□□□ -0.29
Ccdc28b-202ENSMUST00000106035 Gm10110D3Z5M2 615 aa13.23□□□□□ -0.29
Ccdc28b-202ENSMUST00000106035 Adam19O35674 920 aa13.23□□□□□ -0.29
Ccdc28b-202ENSMUST00000106035 Nol4P60954 483 aa13.23□□□□□ -0.29
Ccdc28b-202ENSMUST00000106035 SynaQ5G5D5 617 aa13.23□□□□□ -0.29
Retrieved 100 of 22,080 RNA–protein pairs in 70.4 ms