RNA–Protein interactions for RNA: ENSMUST00000084885.11

Ubp1-202, Transcript of Upstream-binding protein 1, mousemouse

APPRIS P4 TSL 5 BASIC

Gene Ubp1, Length 3,850 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1-202ENSMUST00000084885 Plppr4Q7TME0 766 aa17.32■□□□□ 0.36
Ubp1-202ENSMUST00000084885 Sdad1Q80UZ2 687 aaKnown RBP17.32■□□□□ 0.36
Ubp1-202ENSMUST00000084885 Zdhhc15Q8BGJ0 337 aa17.32■□□□□ 0.36
Ubp1-202ENSMUST00000084885 Tmem161bQ8C2L6 487 aa17.32■□□□□ 0.36
Ubp1-202ENSMUST00000084885 Sox30Q8CGW4 782 aa17.32■□□□□ 0.36
Ubp1-202ENSMUST00000084885 Vmn1r213Q8R278 384 aa17.32■□□□□ 0.36
Ubp1-202ENSMUST00000084885 Rxfp2Q91ZZ5 737 aa17.32■□□□□ 0.36
Ubp1-202ENSMUST00000084885 Rnf112Q96DY5 654 aa17.32■□□□□ 0.36
Ubp1-202ENSMUST00000084885 Cep72Q9D3R3 646 aa17.32■□□□□ 0.36
Ubp1-202ENSMUST00000084885 Krt17Q9QWL7 433 aa17.32■□□□□ 0.36
Ubp1-202ENSMUST00000084885 Znf804aA2AKY4 1200 aa17.32■□□□□ 0.36
Ubp1-202ENSMUST00000084885 Cracr2aQ3UP38 310 aa17.32■□□□□ 0.36
Ubp1-202ENSMUST00000084885 Lig4Q8BTF7 911 aa17.32■□□□□ 0.36
Ubp1-202ENSMUST00000084885 NkrfQ8BY02 690 aaKnown RBP17.32■□□□□ 0.36
Ubp1-202ENSMUST00000084885 Castor2Q8CAB8 329 aa17.32■□□□□ 0.36
Ubp1-202ENSMUST00000084885 Lgi2Q8K4Z0 550 aa17.32■□□□□ 0.36
Ubp1-202ENSMUST00000084885 Arhgef25Q9CWR0 618 aa17.32■□□□□ 0.36
Ubp1-202ENSMUST00000084885 Cacng4Q9JJV4 327 aa17.32■□□□□ 0.36
Ubp1-202ENSMUST00000084885 Slc2a5Q9WV38 501 aa17.32■□□□□ 0.36
Ubp1-202ENSMUST00000084885 Scgb2b11A0A087WR49 112 aa17.31■□□□□ 0.36
Ubp1-202ENSMUST00000084885 Gm3182K7N6T8 263 aa17.31■□□□□ 0.36
Ubp1-202ENSMUST00000084885 Lmnb2P21619 596 aaKnown RBP17.31■□□□□ 0.36
Ubp1-202ENSMUST00000084885 Cyp2f2P33267 491 aa17.31■□□□□ 0.36
Ubp1-202ENSMUST00000084885 B3gat3P58158 335 aa17.31■□□□□ 0.36
Ubp1-202ENSMUST00000084885 Trim72Q1XH17 477 aa17.31■□□□□ 0.36
Ubp1-202ENSMUST00000084885 Q3UK37 420 aa17.31■□□□□ 0.36
Ubp1-202ENSMUST00000084885 Sez6lQ6P1D5 963 aa17.31■□□□□ 0.36
Ubp1-202ENSMUST00000084885 Spata20Q80YT5 790 aa17.31■□□□□ 0.36
Ubp1-202ENSMUST00000084885 Nipa1Q8BHK1 323 aa17.31■□□□□ 0.36
Ubp1-202ENSMUST00000084885 Mical2Q8BML1 960 aa17.31■□□□□ 0.36
Ubp1-202ENSMUST00000084885 Ccdc87Q8CDL9 855 aa17.31■□□□□ 0.36
Ubp1-202ENSMUST00000084885 Trim54Q9ERP3 366 aa17.31■□□□□ 0.36
Ubp1-202ENSMUST00000084885 Irx5Q9JKQ4 484 aa17.31■□□□□ 0.36
Ubp1-202ENSMUST00000084885 Btbd18A0A0A6YY25 723 aa17.31■□□□□ 0.36
Ubp1-202ENSMUST00000084885 Wfdc16A2A5H4 111 aa17.31■□□□□ 0.36
Ubp1-202ENSMUST00000084885 Gm3371F7CQW8 167 aa17.31■□□□□ 0.36
Ubp1-202ENSMUST00000084885 Serpinh1P19324 417 aaKnown RBP17.31■□□□□ 0.36
Ubp1-202ENSMUST00000084885 Sema5aQ62217 1077 aa17.31■□□□□ 0.36
Ubp1-202ENSMUST00000084885 Snx19Q6P4T1 997 aa17.31■□□□□ 0.36
Ubp1-202ENSMUST00000084885 Olfr23Q7TRX4 325 aa17.31■□□□□ 0.36
Ubp1-202ENSMUST00000084885 NelfcdQ922L6 591 aa17.31■□□□□ 0.36
Ubp1-202ENSMUST00000084885 Btbd19S4R1I0 287 aa17.31■□□□□ 0.36
Ubp1-202ENSMUST00000084885 EloblA6PWE0 161 aa17.31■□□□□ 0.36
Ubp1-202ENSMUST00000084885 Exoc7O35250 697 aa17.31■□□□□ 0.36
Ubp1-202ENSMUST00000084885 Lamp1P11438 406 aaKnown RBP17.31■□□□□ 0.36
Ubp1-202ENSMUST00000084885 SftpdP50404 374 aa17.31■□□□□ 0.36
Ubp1-202ENSMUST00000084885 Slc12a2P55012 1205 aa17.31■□□□□ 0.36
Ubp1-202ENSMUST00000084885 Ano7Q14AT5 859 aa17.31■□□□□ 0.36
Ubp1-202ENSMUST00000084885 Rbm20Q3UQS8 1199 aaKnown RBP17.31■□□□□ 0.36
Ubp1-202ENSMUST00000084885 UrgcpQ5NCI0 926 aa17.31■□□□□ 0.36
Ubp1-202ENSMUST00000084885 Leng8Q8CBY3 785 aaKnown RBP17.31■□□□□ 0.36
Ubp1-202ENSMUST00000084885 Cog3Q8CI04 820 aa17.31■□□□□ 0.36
Ubp1-202ENSMUST00000084885 Gimap4Q99JY3 219 aa17.31■□□□□ 0.36
Ubp1-202ENSMUST00000084885 HgsQ99LI8 775 aa17.31■□□□□ 0.36
Ubp1-202ENSMUST00000084885 SftpbP50405 377 aa17.3■□□□□ 0.36
Ubp1-202ENSMUST00000084885 Mmp14P53690 582 aa17.3■□□□□ 0.36
Ubp1-202ENSMUST00000084885 Tubb2aQ7TMM9 445 aa17.3■□□□□ 0.36
Ubp1-202ENSMUST00000084885 Ccser1Q8C0C4 895 aa17.3■□□□□ 0.36
Ubp1-202ENSMUST00000084885 A430089I19RikQ8C9W1 407 aa17.3■□□□□ 0.36
Ubp1-202ENSMUST00000084885 Tubb2bQ9CWF2 445 aa17.3■□□□□ 0.36
Ubp1-202ENSMUST00000084885 Ms4a1P19437 291 aa17.3■□□□□ 0.36
Ubp1-202ENSMUST00000084885 Kcna2P63141 499 aa17.3■□□□□ 0.36
Ubp1-202ENSMUST00000084885 Taf1bP97358 586 aa17.3■□□□□ 0.36
Ubp1-202ENSMUST00000084885 Smyd1P97443 490 aa17.3■□□□□ 0.36
Ubp1-202ENSMUST00000084885 Pbxip1Q3TVI8 727 aa17.3■□□□□ 0.36
Ubp1-202ENSMUST00000084885 Klra5Q60652 266 aa17.3■□□□□ 0.36
Ubp1-202ENSMUST00000084885 Aoc2Q812C9 757 aa17.3■□□□□ 0.36
Ubp1-202ENSMUST00000084885 3830417A13RikQ8BQJ2 303 aa17.3■□□□□ 0.36
Ubp1-202ENSMUST00000084885 Q9D9D9 101 aa17.3■□□□□ 0.36
Ubp1-202ENSMUST00000084885 MycbpQ9EQS3 103 aa17.3■□□□□ 0.36
Ubp1-202ENSMUST00000084885 Arap2Q8BZ05 1703 aa17.3■□□□□ 0.36
Ubp1-202ENSMUST00000084885 Cfap44E9Q5M6 1843 aa17.3■□□□□ 0.36
Ubp1-202ENSMUST00000084885 Gm6657A0A1B0GRJ3 277 aa17.3■□□□□ 0.36
Ubp1-202ENSMUST00000084885 Nr1i3O35627 358 aa17.3■□□□□ 0.36
Ubp1-202ENSMUST00000084885 Rmdn3Q3UJU9 470 aa17.3■□□□□ 0.36
Ubp1-202ENSMUST00000084885 Fam198aQ3UY90 562 aa17.3■□□□□ 0.36
Ubp1-202ENSMUST00000084885 Cyp3a11Q64459 504 aa17.3■□□□□ 0.36
Ubp1-202ENSMUST00000084885 Znf507Q6ZPY5 941 aa17.3■□□□□ 0.36
Ubp1-202ENSMUST00000084885 Tmem220Q8BP07 167 aa17.3■□□□□ 0.36
Ubp1-202ENSMUST00000084885 NcaphQ8C156 731 aa17.3■□□□□ 0.36
Ubp1-202ENSMUST00000084885 Defb19Q8K3I8 83 aa17.3■□□□□ 0.36
Ubp1-202ENSMUST00000084885 Sgms1Q8VCQ6 419 aa17.3■□□□□ 0.36
Ubp1-202ENSMUST00000084885 Chordc1Q9D1P4 331 aaKnown RBP17.3■□□□□ 0.36
Ubp1-202ENSMUST00000084885 Rtn3Q9ES97 964 aa17.3■□□□□ 0.36
Ubp1-202ENSMUST00000084885 Gm13084A2A8N0 494 aa17.29■□□□□ 0.36
Ubp1-202ENSMUST00000084885 Apol7bB1AQP7 369 aa17.29■□□□□ 0.36
Ubp1-202ENSMUST00000084885 Zfp266E9Q2S7 604 aa17.29■□□□□ 0.36
Ubp1-202ENSMUST00000084885 Aoc3O70423 765 aa17.29■□□□□ 0.36
Ubp1-202ENSMUST00000084885 Lpar1P61793 364 aa17.29■□□□□ 0.36
Ubp1-202ENSMUST00000084885 Rnpc3Q3UZ01 514 aaKnown RBP17.29■□□□□ 0.36
Ubp1-202ENSMUST00000084885 Apol7eQ3UZ24 369 aa17.29■□□□□ 0.36
Ubp1-202ENSMUST00000084885 Mief2Q5NCS9 454 aa17.29■□□□□ 0.36
Ubp1-202ENSMUST00000084885 Tspyl5Q69ZB3 406 aa17.29■□□□□ 0.36
Ubp1-202ENSMUST00000084885 Gigyf2Q6Y7W8 1291 aaKnown RBP17.29■□□□□ 0.36
Ubp1-202ENSMUST00000084885 Sh3tc2Q80VA5 1289 aa17.29■□□□□ 0.36
Ubp1-202ENSMUST00000084885 Bpifb6Q8BU51 449 aa17.29■□□□□ 0.36
Ubp1-202ENSMUST00000084885 Q8CD60 292 aa17.29■□□□□ 0.36
Ubp1-202ENSMUST00000084885 Prl2b1Q9DAZ2 228 aa17.29■□□□□ 0.36
Ubp1-202ENSMUST00000084885 Serpinb3aG3X9V8 387 aa17.29■□□□□ 0.36
Ubp1-202ENSMUST00000084885 Fscn1Q61553 493 aa17.29■□□□□ 0.36
Retrieved 100 of 22,080 RNA–protein pairs in 29.4 ms