RNA–Protein interactions for RNA: ENSMUST00000071057.13

Ddx55-201, Transcript of ATP-dependent RNA helicase DDX55, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ddx55, Length 2,799 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55-201ENSMUST00000071057 Q3V0E1 1183 aa12.07□□□□□ -0.48
Ddx55-201ENSMUST00000071057 Fbxo43Q8CDI2 640 aa12.07□□□□□ -0.48
Ddx55-201ENSMUST00000071057 Pcdhgb4Q91XX6 912 aa12.07□□□□□ -0.48
Ddx55-201ENSMUST00000071057 Emc2Q9CRD2 297 aa12.07□□□□□ -0.48
Ddx55-201ENSMUST00000071057 Dpp7Q9ET22 506 aa12.07□□□□□ -0.48
Ddx55-201ENSMUST00000071057 Mettl1Q9Z120 268 aa12.07□□□□□ -0.48
Ddx55-201ENSMUST00000071057 Astn1Q61137 1302 aa12.07□□□□□ -0.48
Ddx55-201ENSMUST00000071057 Abcb11Q9QY30 1321 aa12.07□□□□□ -0.48
Ddx55-201ENSMUST00000071057 Trip11E9Q512 1976 aa12.07□□□□□ -0.48
Ddx55-201ENSMUST00000071057 Zfp626A0A0U1RQ84 676 aa12.07□□□□□ -0.48
Ddx55-201ENSMUST00000071057 Atp2c2A7L9Z8 944 aa12.07□□□□□ -0.48
Ddx55-201ENSMUST00000071057 Gm2030D3Z7C4 212 aa12.07□□□□□ -0.48
Ddx55-201ENSMUST00000071057 Olfr552E9Q545 317 aa12.07□□□□□ -0.48
Ddx55-201ENSMUST00000071057 Sept7O55131 436 aa12.07□□□□□ -0.48
Ddx55-201ENSMUST00000071057 Mucl2P02815 138 aa12.07□□□□□ -0.48
Ddx55-201ENSMUST00000071057 Lmnb2P21619 596 aaKnown RBP12.07□□□□□ -0.48
Ddx55-201ENSMUST00000071057 Cbx2P30658 519 aa12.07□□□□□ -0.48
Ddx55-201ENSMUST00000071057 GssP51855 474 aa12.07□□□□□ -0.48
Ddx55-201ENSMUST00000071057 Cdca2Q14B71 982 aaKnown RBP12.07□□□□□ -0.48
Ddx55-201ENSMUST00000071057 Sema5bQ60519 1093 aa12.07□□□□□ -0.48
Ddx55-201ENSMUST00000071057 Nr1h4Q60641 488 aa12.07□□□□□ -0.48
Ddx55-201ENSMUST00000071057 Tll1Q62381 1013 aa12.07□□□□□ -0.48
Ddx55-201ENSMUST00000071057 Pla2g4cQ64GA5 597 aa12.07□□□□□ -0.48
Ddx55-201ENSMUST00000071057 Sez6lQ6P1D5 963 aa12.07□□□□□ -0.48
Ddx55-201ENSMUST00000071057 Lrsam1Q80ZI6 727 aa12.07□□□□□ -0.48
Ddx55-201ENSMUST00000071057 Usp37Q8C0R0 979 aa12.07□□□□□ -0.48
Ddx55-201ENSMUST00000071057 Nup58Q8R332 587 aa12.07□□□□□ -0.48
Ddx55-201ENSMUST00000071057 Atp2a1Q8R429 994 aa12.07□□□□□ -0.48
Ddx55-201ENSMUST00000071057 Mrps5Q99N87 432 aaKnown RBP12.07□□□□□ -0.48
Ddx55-201ENSMUST00000071057 Nudt12Q9DCN1 462 aa12.07□□□□□ -0.48
Ddx55-201ENSMUST00000071057 Olig1Q9JKN5 260 aa12.07□□□□□ -0.48
Ddx55-201ENSMUST00000071057 Gipc2Q9Z2H7 314 aa12.07□□□□□ -0.48
Ddx55-201ENSMUST00000071057 RptorQ8K4Q0 1335 aa12.07□□□□□ -0.48
Ddx55-201ENSMUST00000071057 Megf6Q80V70 1572 aa12.07□□□□□ -0.48
Ddx55-201ENSMUST00000071057 Dicer1Q8R418 1916 aa12.07□□□□□ -0.48
Ddx55-201ENSMUST00000071057 Lrrc23O35125 340 aa12.07□□□□□ -0.48
Ddx55-201ENSMUST00000071057 Cdk14O35495 469 aa12.07□□□□□ -0.48
Ddx55-201ENSMUST00000071057 Ubxn2bQ0KL01 331 aa12.07□□□□□ -0.48
Ddx55-201ENSMUST00000071057 Rnf113a2Q14B01 337 aa12.07□□□□□ -0.48
Ddx55-201ENSMUST00000071057 Rnpc3Q3UZ01 514 aaKnown RBP12.07□□□□□ -0.48
Ddx55-201ENSMUST00000071057 Tcf12Q61286 706 aa12.07□□□□□ -0.48
Ddx55-201ENSMUST00000071057 Ankfy1Q810B6 1169 aa12.07□□□□□ -0.48
Ddx55-201ENSMUST00000071057 Rmdn2Q8BSE0 410 aa12.07□□□□□ -0.48
Ddx55-201ENSMUST00000071057 Leg1Q8C6C9 337 aa12.07□□□□□ -0.48
Ddx55-201ENSMUST00000071057 Acot11Q8VHQ9 594 aa12.07□□□□□ -0.48
Ddx55-201ENSMUST00000071057 Cfap57Q9D180 1249 aa12.07□□□□□ -0.48
Ddx55-201ENSMUST00000071057 Arl2bpQ9D385 163 aa12.07□□□□□ -0.48
Ddx55-201ENSMUST00000071057 Rexo2Q9D8S4 237 aa12.07□□□□□ -0.48
Ddx55-201ENSMUST00000071057 Capn12Q9ER56 720 aa12.07□□□□□ -0.48
Ddx55-201ENSMUST00000071057 MesdQ9ERE7 224 aa12.07□□□□□ -0.48
Ddx55-201ENSMUST00000071057 Nup50Q9JIH2 466 aaKnown RBP12.07□□□□□ -0.48
Ddx55-201ENSMUST00000071057 Sv2aQ9JIS5 742 aa12.07□□□□□ -0.48
Ddx55-201ENSMUST00000071057 Adam22Q9R1V6 904 aa12.07□□□□□ -0.48
Ddx55-201ENSMUST00000071057 Myh10Q61879 1976 aaKnown RBP12.06□□□□□ -0.48
Ddx55-201ENSMUST00000071057 PhipQ8VDD9 1821 aaKnown RBP12.06□□□□□ -0.48
Ddx55-201ENSMUST00000071057 Iqcj-Schip1A0A088MLT8 559 aa12.06□□□□□ -0.48
Ddx55-201ENSMUST00000071057 Zfp174B9EJW5 407 aa12.06□□□□□ -0.48
Ddx55-201ENSMUST00000071057 Cacna2d1O08532 1103 aa12.06□□□□□ -0.48
Ddx55-201ENSMUST00000071057 Timm44O35857 452 aa12.06□□□□□ -0.48
Ddx55-201ENSMUST00000071057 FxnO35943 207 aa12.06□□□□□ -0.48
Ddx55-201ENSMUST00000071057 Schip1P0DPB4 484 aa12.06□□□□□ -0.48
Ddx55-201ENSMUST00000071057 DesP31001 469 aaKnown RBP12.06□□□□□ -0.48
Ddx55-201ENSMUST00000071057 Fmr1P35922 614 aaKnown RBP12.06□□□□□ -0.48
Ddx55-201ENSMUST00000071057 Cul4aQ3TCH7 759 aa12.06□□□□□ -0.48
Ddx55-201ENSMUST00000071057 Gm1604bQ3TRG0 118 aa12.06□□□□□ -0.48
Ddx55-201ENSMUST00000071057 Supt20hQ7TT00 530 aaKnown RBP12.06□□□□□ -0.48
Ddx55-201ENSMUST00000071057 Dhx32Q8BZS9 744 aa12.06□□□□□ -0.48
Ddx55-201ENSMUST00000071057 Wdr37Q8CBE3 496 aa12.06□□□□□ -0.48
Ddx55-201ENSMUST00000071057 Krtcap3Q8K177 240 aa12.06□□□□□ -0.48
Ddx55-201ENSMUST00000071057 Gle1Q8R322 699 aa12.06□□□□□ -0.48
Ddx55-201ENSMUST00000071057 MmadhcQ99LS1 296 aa12.06□□□□□ -0.48
Ddx55-201ENSMUST00000071057 Ndufb5Q9CQH3 189 aa12.06□□□□□ -0.48
Ddx55-201ENSMUST00000071057 KynuQ9CXF0 464 aa12.06□□□□□ -0.48
Ddx55-201ENSMUST00000071057 Trmt10bQ9D075 318 aa12.06□□□□□ -0.48
Ddx55-201ENSMUST00000071057 Rpap3Q9D706 660 aa12.06□□□□□ -0.48
Ddx55-201ENSMUST00000071057 1700016D06RikQ9DAA5 166 aa12.06□□□□□ -0.48
Ddx55-201ENSMUST00000071057 Scgb2b12S4R2L0 112 aa12.06□□□□□ -0.48
Ddx55-201ENSMUST00000071057 Gm28036V9GXJ1 658 aa12.06□□□□□ -0.48
Ddx55-201ENSMUST00000071057 Lamb2Q61292 1799 aa12.06□□□□□ -0.48
Ddx55-201ENSMUST00000071057 Col4a3Q9QZS0 1669 aa12.06□□□□□ -0.48
Ddx55-201ENSMUST00000071057 Slc35g2D3YVE8 412 aa12.06□□□□□ -0.48
Ddx55-201ENSMUST00000071057 Zfp266E9Q2S7 604 aa12.06□□□□□ -0.48
Ddx55-201ENSMUST00000071057 Gm4841E9QAA8 417 aa12.06□□□□□ -0.48
Ddx55-201ENSMUST00000071057 Mov10P23249 1004 aaKnown RBP12.06□□□□□ -0.48
Ddx55-201ENSMUST00000071057 ArsbP50429 534 aa12.06□□□□□ -0.48
Ddx55-201ENSMUST00000071057 VegfaQ00731 214 aa12.06□□□□□ -0.48
Ddx55-201ENSMUST00000071057 Rnf40Q3U319 1001 aa12.06□□□□□ -0.48
Ddx55-201ENSMUST00000071057 Pcgf5Q3UK78 256 aa12.06□□□□□ -0.48
Ddx55-201ENSMUST00000071057 Wdr18Q4VBE8 431 aa12.06□□□□□ -0.48
Ddx55-201ENSMUST00000071057 Serpinb3dQ6UKZ0 387 aa12.06□□□□□ -0.48
Ddx55-201ENSMUST00000071057 Frmd4aQ8BIE6 1020 aa12.06□□□□□ -0.48
Ddx55-201ENSMUST00000071057 PolrmtQ8BKF1 1207 aaKnown RBP12.06□□□□□ -0.48
Ddx55-201ENSMUST00000071057 Lgi2Q8K4Z0 550 aa12.06□□□□□ -0.48
Ddx55-201ENSMUST00000071057 AdigQ8R400 80 aa12.06□□□□□ -0.48
Ddx55-201ENSMUST00000071057 Caap1Q8VDY9 356 aa12.06□□□□□ -0.48
Ddx55-201ENSMUST00000071057 Lmcd1Q8VEE1 365 aa12.06□□□□□ -0.48
Ddx55-201ENSMUST00000071057 Asb11Q9CQ31 323 aa12.06□□□□□ -0.48
Ddx55-201ENSMUST00000071057 Rnf6Q9DBU5 667 aa12.06□□□□□ -0.48
Ddx55-201ENSMUST00000071057 Habp4Q9JKS5 411 aaKnown RBP12.06□□□□□ -0.48
Ddx55-201ENSMUST00000071057 Gm8994E9PV04 411 aaKnown RBP12.05□□□□□ -0.48
Retrieved 100 of 22,080 RNA–protein pairs in 64.5 ms