RNA–Protein interactions for RNA: ENSMUST00000057438.6

Vcpip1-201, Transcript of Deubiquitinating protein VCIP135, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Vcpip1, Length 9,749 nt, Biotype protein coding, Subcellular localisation Nucleus, Pseudopodium .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vcpip1-201ENSMUST00000057438 NptxrQ99J85 493 aa13.01□□□□□ -0.33
Vcpip1-201ENSMUST00000057438 Abca8aQ8K442 1620 aa13□□□□□ -0.33
Vcpip1-201ENSMUST00000057438 Olfr1123A2AT85 323 aa13□□□□□ -0.33
Vcpip1-201ENSMUST00000057438 Dynll1P63168 89 aa13□□□□□ -0.33
Vcpip1-201ENSMUST00000057438 Ppm1nQ8BGL1 404 aa13□□□□□ -0.33
Vcpip1-201ENSMUST00000057438 Vmn1r191Q8K4D0 298 aa13□□□□□ -0.33
Vcpip1-201ENSMUST00000057438 Abcf2Q99LE6 628 aaKnown RBP13□□□□□ -0.33
Vcpip1-201ENSMUST00000057438 Gm20911A0A087WSS0 222 aa13□□□□□ -0.33
Vcpip1-201ENSMUST00000057438 Zcchc7B1AX39 541 aa13□□□□□ -0.33
Vcpip1-201ENSMUST00000057438 Zfp882E9Q4R4 555 aa13□□□□□ -0.33
Vcpip1-201ENSMUST00000057438 Stx7O70439 261 aa13□□□□□ -0.33
Vcpip1-201ENSMUST00000057438 GabrdP22933 449 aa13□□□□□ -0.33
Vcpip1-201ENSMUST00000057438 RalaP63321 206 aa13□□□□□ -0.33
Vcpip1-201ENSMUST00000057438 Cfap52Q5F201 620 aa13□□□□□ -0.33
Vcpip1-201ENSMUST00000057438 Npdc1Q64322 332 aa13□□□□□ -0.33
Vcpip1-201ENSMUST00000057438 Krt73Q6NXH9 539 aa13□□□□□ -0.33
Vcpip1-201ENSMUST00000057438 Ccdc134Q8C7V8 229 aa13□□□□□ -0.33
Vcpip1-201ENSMUST00000057438 Dync1li1Q8R1Q8 523 aa13□□□□□ -0.33
Vcpip1-201ENSMUST00000057438 Slxl1Q9D515 155 aa13□□□□□ -0.33
Vcpip1-201ENSMUST00000057438 RalbQ9JIW9 206 aa13□□□□□ -0.33
Vcpip1-201ENSMUST00000057438 Kdm6bQ5NCY0 1641 aa13□□□□□ -0.33
Vcpip1-201ENSMUST00000057438 Psmd14O35593 310 aa13□□□□□ -0.33
Vcpip1-201ENSMUST00000057438 Lmntd2Q0VET5 664 aa13□□□□□ -0.33
Vcpip1-201ENSMUST00000057438 Krt31Q61765 416 aa13□□□□□ -0.33
Vcpip1-201ENSMUST00000057438 Fastkd1Q6DI86 829 aa13□□□□□ -0.33
Vcpip1-201ENSMUST00000057438 Slc6a15Q8BG16 729 aa13□□□□□ -0.33
Vcpip1-201ENSMUST00000057438 Nod1Q8BHB0 953 aa13□□□□□ -0.33
Vcpip1-201ENSMUST00000057438 Kat2bQ9JHD1 813 aa13□□□□□ -0.33
Vcpip1-201ENSMUST00000057438 Kiaa1107Q80TK0 1369 aa13□□□□□ -0.33
Vcpip1-201ENSMUST00000057438 Gm28897A0A087WP44 222 aa13□□□□□ -0.33
Vcpip1-201ENSMUST00000057438 C130060K24RikG3UWA8 416 aa13□□□□□ -0.33
Vcpip1-201ENSMUST00000057438 Cyp3a13Q64464 503 aa13□□□□□ -0.33
Vcpip1-201ENSMUST00000057438 Trim56Q80VI1 734 aaKnown RBP13□□□□□ -0.33
Vcpip1-201ENSMUST00000057438 Psmd9Q9CR00 222 aa13□□□□□ -0.33
Vcpip1-201ENSMUST00000057438 Mtmr1Q9Z2C4 669 aa13□□□□□ -0.33
Vcpip1-201ENSMUST00000057438 Abca9Q8K449 1623 aa13□□□□□ -0.33
Vcpip1-201ENSMUST00000057438 Snap23O09044 210 aa13□□□□□ -0.33
Vcpip1-201ENSMUST00000057438 Trim43bP86448 445 aa13□□□□□ -0.33
Vcpip1-201ENSMUST00000057438 Grid1Q61627 1009 aa13□□□□□ -0.33
Vcpip1-201ENSMUST00000057438 Phka2Q8BWJ3 1235 aa13□□□□□ -0.33
Vcpip1-201ENSMUST00000057438 Smyd3Q9CWR2 428 aa13□□□□□ -0.33
Vcpip1-201ENSMUST00000057438 Dmap1Q9JI44 468 aa13□□□□□ -0.33
Vcpip1-201ENSMUST00000057438 Lrrc38A2VDH3 298 aa13□□□□□ -0.33
Vcpip1-201ENSMUST00000057438 Serpina5P70458 405 aa13□□□□□ -0.33
Vcpip1-201ENSMUST00000057438 HpcaP84075 193 aa13□□□□□ -0.33
Vcpip1-201ENSMUST00000057438 Zfp263Q8CF60 680 aa13□□□□□ -0.33
Vcpip1-201ENSMUST00000057438 Batf3Q9D275 118 aa13□□□□□ -0.33
Vcpip1-201ENSMUST00000057438 Rhox3fA2ANE1 215 aa13□□□□□ -0.33
Vcpip1-201ENSMUST00000057438 Rgs4O08899 205 aa13□□□□□ -0.33
Vcpip1-201ENSMUST00000057438 Rab17P35292 214 aa13□□□□□ -0.33
Vcpip1-201ENSMUST00000057438 Serping1P97290 504 aa13□□□□□ -0.33
Vcpip1-201ENSMUST00000057438 Qrich1Q3UA37 777 aa13□□□□□ -0.33
Vcpip1-201ENSMUST00000057438 Ube2oQ6ZPJ3 1288 aa13□□□□□ -0.33
Vcpip1-201ENSMUST00000057438 Snrnp27Q8K194 155 aa13□□□□□ -0.33
Vcpip1-201ENSMUST00000057438 Trpv2Q9WTR1 756 aa13□□□□□ -0.33
Vcpip1-201ENSMUST00000057438 Col15a1O35206 1367 aa13□□□□□ -0.33
Vcpip1-201ENSMUST00000057438 1700017N19RikA0A087WPJ1 469 aa13□□□□□ -0.33
Vcpip1-201ENSMUST00000057438 InhbeO08717 350 aa13□□□□□ -0.33
Vcpip1-201ENSMUST00000057438 RargP18911 458 aaKnown RBP13□□□□□ -0.33
Vcpip1-201ENSMUST00000057438 Tekt4Q149S1 447 aa13□□□□□ -0.33
Vcpip1-201ENSMUST00000057438 Fam120bQ6RI63 786 aa13□□□□□ -0.33
Vcpip1-201ENSMUST00000057438 Gadl1Q80WP8 550 aa13□□□□□ -0.33
Vcpip1-201ENSMUST00000057438 Dnajc5gQ8C632 165 aa13□□□□□ -0.33
Vcpip1-201ENSMUST00000057438 Herc3A6H6S0 1050 aa12.99□□□□□ -0.33
Vcpip1-201ENSMUST00000057438 Lnx1O70263 728 aa12.99□□□□□ -0.33
Vcpip1-201ENSMUST00000057438 Hoxc10P31257 342 aa12.99□□□□□ -0.33
Vcpip1-201ENSMUST00000057438 Sec31aQ3UPL0 1230 aaKnown RBP12.99□□□□□ -0.33
Vcpip1-201ENSMUST00000057438 Slitrk2Q810C0 846 aa12.99□□□□□ -0.33
Vcpip1-201ENSMUST00000057438 Trim65Q8BFW4 522 aa12.99□□□□□ -0.33
Vcpip1-201ENSMUST00000057438 Actl9Q8CG27 415 aa12.99□□□□□ -0.33
Vcpip1-201ENSMUST00000057438 Vps50Q8CI71 964 aa12.99□□□□□ -0.33
Vcpip1-201ENSMUST00000057438 Gm2832F7AEC7 200 aa12.99□□□□□ -0.33
Vcpip1-201ENSMUST00000057438 Tfcp2l1Q3UNW5 479 aa12.99□□□□□ -0.33
Vcpip1-201ENSMUST00000057438 Aldh5a1Q8BWF0 523 aa12.99□□□□□ -0.33
Vcpip1-201ENSMUST00000057438 Caap1Q8VDY9 356 aa12.99□□□□□ -0.33
Vcpip1-201ENSMUST00000057438 Xpo6Q924Z6 1125 aa12.99□□□□□ -0.33
Vcpip1-201ENSMUST00000057438 Unc45aQ99KD5 944 aa12.99□□□□□ -0.33
Vcpip1-201ENSMUST00000057438 NcaphQ8C156 731 aa12.99□□□□□ -0.33
Vcpip1-201ENSMUST00000057438 OtoaQ8K561 1137 aa12.99□□□□□ -0.33
Vcpip1-201ENSMUST00000057438 Klra10Q9R1G6 266 aa12.99□□□□□ -0.33
Vcpip1-201ENSMUST00000057438 Hsd17b4P51660 735 aaKnown RBP12.99□□□□□ -0.33
Vcpip1-201ENSMUST00000057438 PltpP55065 493 aa12.99□□□□□ -0.33
Vcpip1-201ENSMUST00000057438 Gm156Q58A37 223 aa12.99□□□□□ -0.33
Vcpip1-201ENSMUST00000057438 SnrpaQ62189 287 aaKnown RBP12.99□□□□□ -0.33
Vcpip1-201ENSMUST00000057438 Ccdc137Q8R0K4 290 aaKnown RBP12.99□□□□□ -0.33
Vcpip1-201ENSMUST00000057438 Chchd6Q91VN4 273 aa12.99□□□□□ -0.33
Vcpip1-201ENSMUST00000057438 Tubb1A2AQ07 451 aa12.99□□□□□ -0.33
Vcpip1-201ENSMUST00000057438 Ttll10A4Q9F3 704 aa12.99□□□□□ -0.33
Vcpip1-201ENSMUST00000057438 Fam129cD3YZB0 591 aa12.99□□□□□ -0.33
Vcpip1-201ENSMUST00000057438 Arpp19P56212 112 aaKnown RBP12.99□□□□□ -0.33
Vcpip1-201ENSMUST00000057438 Psmc5P62196 406 aa12.99□□□□□ -0.33
Vcpip1-201ENSMUST00000057438 Polr1bP70700 1135 aa12.99□□□□□ -0.33
Vcpip1-201ENSMUST00000057438 Tmem120bQ3TA38 339 aa12.99□□□□□ -0.33
Vcpip1-201ENSMUST00000057438 TfrcQ62351 763 aaKnown RBP12.99□□□□□ -0.33
Vcpip1-201ENSMUST00000057438 Stx5Q8K1E0 355 aa12.99□□□□□ -0.33
Vcpip1-201ENSMUST00000057438 ChiaQ91XA9 473 aa12.99□□□□□ -0.33
Vcpip1-201ENSMUST00000057438 Tbk1Q9WUN2 729 aa12.99□□□□□ -0.33
Vcpip1-201ENSMUST00000057438 Skint6A7XUZ6 1240 aa12.99□□□□□ -0.33
Vcpip1-201ENSMUST00000057438 Gm5483B2RV77 97 aa12.99□□□□□ -0.33
Vcpip1-201ENSMUST00000057438 Mxi1P50540 228 aa12.99□□□□□ -0.33
Retrieved 100 of 22,080 RNA–protein pairs in 20.9 ms