RNA–Protein interactions for RNA: ENSMUST00000053317.11

Bdnf-201, Transcript of Brain-derived neurotrophic factor, mousemouse

TSL 1 (best) BASIC

Gene Bdnf, Length 4,266 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-201ENSMUST00000053317 Sept5Q9Z2Q6 369 aa7.38□□□□□ -1.23
Bdnf-201ENSMUST00000053317 Pappa2E9PZ87 1789 aa7.38□□□□□ -1.23
Bdnf-201ENSMUST00000053317 Tmem240B2RWJ3 173 aa7.38□□□□□ -1.23
Bdnf-201ENSMUST00000053317 Abi2P62484 446 aa7.38□□□□□ -1.23
Bdnf-201ENSMUST00000053317 Irx1P81068 480 aa7.38□□□□□ -1.23
Bdnf-201ENSMUST00000053317 ScapQ6GQT6 1276 aa7.38□□□□□ -1.23
Bdnf-201ENSMUST00000053317 Colgalt2Q6NVG7 625 aa7.38□□□□□ -1.23
Bdnf-201ENSMUST00000053317 Tsga10Q6NY15 697 aa7.38□□□□□ -1.23
Bdnf-201ENSMUST00000053317 Neu4Q8BZL1 478 aa7.38□□□□□ -1.23
Bdnf-201ENSMUST00000053317 Gdap1l1Q8VE33 370 aa7.38□□□□□ -1.23
Bdnf-201ENSMUST00000053317 Kbtbd12Q9D618 625 aa7.38□□□□□ -1.23
Bdnf-201ENSMUST00000053317 Ppp2r3cQ9JK24 453 aa7.38□□□□□ -1.23
Bdnf-201ENSMUST00000053317 Hyou1Q9JKR6 999 aaKnown RBP7.38□□□□□ -1.23
Bdnf-201ENSMUST00000053317 Cacna1hO88427 2365 aa7.37□□□□□ -1.23
Bdnf-201ENSMUST00000053317 1700017N19RikA0A087WPJ1 469 aa7.37□□□□□ -1.23
Bdnf-201ENSMUST00000053317 Psmc3O88685 442 aa7.37□□□□□ -1.23
Bdnf-201ENSMUST00000053317 Ptpn11P35235 597 aa7.37□□□□□ -1.23
Bdnf-201ENSMUST00000053317 Cetn1P41209 172 aa7.37□□□□□ -1.23
Bdnf-201ENSMUST00000053317 ClgnP52194 611 aa7.37□□□□□ -1.23
Bdnf-201ENSMUST00000053317 Wdr5P61965 334 aa7.37□□□□□ -1.23
Bdnf-201ENSMUST00000053317 Q3TTJ4 293 aa7.37□□□□□ -1.23
Bdnf-201ENSMUST00000053317 Zfyve27Q3TXX3 415 aa7.37□□□□□ -1.23
Bdnf-201ENSMUST00000053317 Ice2Q3UZ18 988 aaKnown RBP7.37□□□□□ -1.23
Bdnf-201ENSMUST00000053317 Icam5Q60625 917 aa7.37□□□□□ -1.23
Bdnf-201ENSMUST00000053317 TxlnaQ6PAM1 554 aaKnown RBP7.37□□□□□ -1.23
Bdnf-201ENSMUST00000053317 Vwa2Q70UZ7 791 aa7.37□□□□□ -1.23
Bdnf-201ENSMUST00000053317 Fbxl5Q8C2S5 690 aa7.37□□□□□ -1.23
Bdnf-201ENSMUST00000053317 Spata32Q8C5V0 334 aa7.37□□□□□ -1.23
Bdnf-201ENSMUST00000053317 E2f4Q8R0K9 410 aa7.37□□□□□ -1.23
Bdnf-201ENSMUST00000053317 Psmd2Q8VDM4 908 aa7.37□□□□□ -1.23
Bdnf-201ENSMUST00000053317 MiosQ8VE19 875 aa7.37□□□□□ -1.23
Bdnf-201ENSMUST00000053317 Nmrk1Q91W63 195 aa7.37□□□□□ -1.23
Bdnf-201ENSMUST00000053317 Tas1r3Q925D8 858 aa7.37□□□□□ -1.23
Bdnf-201ENSMUST00000053317 Smtnl1Q99LM3 459 aa7.37□□□□□ -1.23
Bdnf-201ENSMUST00000053317 MutyhQ99P21 515 aa7.37□□□□□ -1.23
Bdnf-201ENSMUST00000053317 VasnQ9CZT5 673 aa7.37□□□□□ -1.23
Bdnf-201ENSMUST00000053317 Rbm31yQ9D3U4 565 aa7.37□□□□□ -1.23
Bdnf-201ENSMUST00000053317 Myo1cQ9WTI7 1063 aa7.37□□□□□ -1.23
Bdnf-201ENSMUST00000053317 Myh9Q8VDD5 1960 aaKnown RBP7.37□□□□□ -1.23
Bdnf-201ENSMUST00000053317 Fam209A2APA5 170 aa7.37□□□□□ -1.23
Bdnf-201ENSMUST00000053317 Ace3D0G895 737 aa7.37□□□□□ -1.23
Bdnf-201ENSMUST00000053317 Prl6a1O35257 230 aa7.37□□□□□ -1.23
Bdnf-201ENSMUST00000053317 Spata24Q6P926 205 aa7.37□□□□□ -1.23
Bdnf-201ENSMUST00000053317 Lig4Q8BTF7 911 aa7.37□□□□□ -1.23
Bdnf-201ENSMUST00000053317 Pwp2Q8BU03 919 aaKnown RBP7.37□□□□□ -1.23
Bdnf-201ENSMUST00000053317 Ankk1Q8BZ25 745 aa7.37□□□□□ -1.23
Bdnf-201ENSMUST00000053317 Lrrc66Q8K0B3 872 aa7.37□□□□□ -1.23
Bdnf-201ENSMUST00000053317 Fam49bQ921M7 324 aa7.37□□□□□ -1.23
Bdnf-201ENSMUST00000053317 Adam33Q923W9 797 aa7.37□□□□□ -1.23
Bdnf-201ENSMUST00000053317 Rassf7Q9DD19 359 aa7.37□□□□□ -1.23
Bdnf-201ENSMUST00000053317 Igdcc4Q9EQS9 1252 aa7.37□□□□□ -1.23
Bdnf-201ENSMUST00000053317 Trpm5Q9JJH7 1158 aa7.37□□□□□ -1.23
Bdnf-201ENSMUST00000053317 Slc2a5Q9WV38 501 aa7.37□□□□□ -1.23
Bdnf-201ENSMUST00000053317 Lamb1P02469 1786 aa7.37□□□□□ -1.23
Bdnf-201ENSMUST00000053317 BC025446A0A087WQT1 134 aa7.37□□□□□ -1.23
Bdnf-201ENSMUST00000053317 Fbf1A2A870 1173 aa7.37□□□□□ -1.23
Bdnf-201ENSMUST00000053317 4933406M09RikG3XA12 479 aa7.37□□□□□ -1.23
Bdnf-201ENSMUST00000053317 Gm3383J3QQ59 259 aa7.37□□□□□ -1.23
Bdnf-201ENSMUST00000053317 Sstr3P30935 428 aa7.37□□□□□ -1.23
Bdnf-201ENSMUST00000053317 Ephb3P54754 993 aaKnown RBP7.37□□□□□ -1.23
Bdnf-201ENSMUST00000053317 Cdh8P97291 799 aa7.37□□□□□ -1.23
Bdnf-201ENSMUST00000053317 Prdx5P99029 210 aa7.37□□□□□ -1.23
Bdnf-201ENSMUST00000053317 Top1Q04750 767 aaKnown RBP7.37□□□□□ -1.23
Bdnf-201ENSMUST00000053317 Olfr412Q7TRW7 312 aa7.37□□□□□ -1.23
Bdnf-201ENSMUST00000053317 Rassf2Q8BMS9 326 aa7.37□□□□□ -1.23
Bdnf-201ENSMUST00000053317 Rbbp5Q8BX09 538 aaKnown RBP7.37□□□□□ -1.23
Bdnf-201ENSMUST00000053317 Eps8l1Q8R5F8 716 aa7.37□□□□□ -1.23
Bdnf-201ENSMUST00000053317 Mcrs1Q99L90 462 aa7.37□□□□□ -1.23
Bdnf-201ENSMUST00000053317 Chmp2aQ9DB34 222 aa7.37□□□□□ -1.23
Bdnf-201ENSMUST00000053317 Ugt1a8D3Z748 530 aa7.36□□□□□ -1.23
Bdnf-201ENSMUST00000053317 Ugt1a10E9PXN7 530 aa7.36□□□□□ -1.23
Bdnf-201ENSMUST00000053317 Adam15O88839 864 aa7.36□□□□□ -1.23
Bdnf-201ENSMUST00000053317 Prl2c2P04095 224 aa7.36□□□□□ -1.23
Bdnf-201ENSMUST00000053317 Nol4P60954 483 aa7.36□□□□□ -1.23
Bdnf-201ENSMUST00000053317 Psmc1P62192 440 aa7.36□□□□□ -1.23
Bdnf-201ENSMUST00000053317 Tex35Q14BK3 207 aa7.36□□□□□ -1.23
Bdnf-201ENSMUST00000053317 BC051142Q3V0M8 400 aa7.36□□□□□ -1.23
Bdnf-201ENSMUST00000053317 Cyp2c66Q5GLZ0 490 aa7.36□□□□□ -1.23
Bdnf-201ENSMUST00000053317 PisdQ8BSF4 406 aa7.36□□□□□ -1.23
Bdnf-201ENSMUST00000053317 Q8BZJ8 459 aa7.36□□□□□ -1.23
Bdnf-201ENSMUST00000053317 Brd3Q8K2F0 726 aaKnown RBP7.36□□□□□ -1.23
Bdnf-201ENSMUST00000053317 Atp6v0a4Q920R6 833 aa7.36□□□□□ -1.23
Bdnf-201ENSMUST00000053317 MymkQ9D1N4 221 aa7.36□□□□□ -1.23
Bdnf-201ENSMUST00000053317 Tubgcp4Q9D4F8 667 aa7.36□□□□□ -1.23
Bdnf-201ENSMUST00000053317 Arih1Q9Z1K5 555 aa7.36□□□□□ -1.23
Bdnf-201ENSMUST00000053317 Trip11E9Q512 1976 aa7.36□□□□□ -1.23
Bdnf-201ENSMUST00000053317 Hes2O54792 157 aa7.36□□□□□ -1.23
Bdnf-201ENSMUST00000053317 FechP22315 420 aaKnown RBP7.36□□□□□ -1.23
Bdnf-201ENSMUST00000053317 Bmpr1aP36895 532 aa7.36□□□□□ -1.23
Bdnf-201ENSMUST00000053317 Nek1P51954 1203 aa7.36□□□□□ -1.23
Bdnf-201ENSMUST00000053317 Gpr15Q0VDU3 360 aa7.36□□□□□ -1.23
Bdnf-201ENSMUST00000053317 Cyb5r4Q3TDX8 528 aa7.36□□□□□ -1.23
Bdnf-201ENSMUST00000053317 Cyp11b1Q3TG86 501 aa7.36□□□□□ -1.23
Bdnf-201ENSMUST00000053317 Nr2c1Q505F1 590 aa7.36□□□□□ -1.23
Bdnf-201ENSMUST00000053317 Papd5Q68ED3 633 aaKnown RBP7.36□□□□□ -1.23
Bdnf-201ENSMUST00000053317 Znf507Q6ZPY5 941 aa7.36□□□□□ -1.23
Bdnf-201ENSMUST00000053317 Dmtf1Q8CE22 761 aa7.36□□□□□ -1.23
Bdnf-201ENSMUST00000053317 Plagl2Q925T4 496 aa7.36□□□□□ -1.23
Bdnf-201ENSMUST00000053317 Ankrd1Q9CR42 319 aa7.36□□□□□ -1.23
Bdnf-201ENSMUST00000053317 Cbx6Q9DBY5 414 aa7.36□□□□□ -1.23
Retrieved 100 of 22,080 RNA–protein pairs in 18.6 ms