RNA–Protein interactions for RNA: ENSMUST00000029480.8

Prpf38b-201, Transcript of Pre-mRNA-splicing factor 38B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Prpf38b, Length 3,026 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38b-201ENSMUST00000029480 Lrrc36Q3V0M2 755 aa14.15□□□□□ -0.14
Prpf38b-201ENSMUST00000029480 CpQ61147 1061 aa14.15□□□□□ -0.14
Prpf38b-201ENSMUST00000029480 Senp6Q6P7W0 1132 aa14.15□□□□□ -0.14
Prpf38b-201ENSMUST00000029480 Tmem132dQ76HP3 1097 aa14.15□□□□□ -0.14
Prpf38b-201ENSMUST00000029480 Ints2Q80UK8 1198 aa14.15□□□□□ -0.14
Prpf38b-201ENSMUST00000029480 Epc2Q8C0I4 808 aa14.15□□□□□ -0.14
Prpf38b-201ENSMUST00000029480 Fbxo43Q8CDI2 640 aa14.15□□□□□ -0.14
Prpf38b-201ENSMUST00000029480 Acat1Q8QZT1 424 aa14.15□□□□□ -0.14
Prpf38b-201ENSMUST00000029480 Stk4Q9JI11 487 aa14.15□□□□□ -0.14
Prpf38b-201ENSMUST00000029480 Gm4297D3YWB7 211 aa14.15□□□□□ -0.14
Prpf38b-201ENSMUST00000029480 TazI7HJS2 263 aa14.15□□□□□ -0.14
Prpf38b-201ENSMUST00000029480 AoahO35298 574 aa14.15□□□□□ -0.14
Prpf38b-201ENSMUST00000029480 Zw10O54692 779 aa14.15□□□□□ -0.14
Prpf38b-201ENSMUST00000029480 Nmt1O70310 496 aaKnown RBP14.15□□□□□ -0.14
Prpf38b-201ENSMUST00000029480 Fbln1Q08879 705 aa14.15□□□□□ -0.14
Prpf38b-201ENSMUST00000029480 Specc1Q5SXY1 1067 aa14.15□□□□□ -0.14
Prpf38b-201ENSMUST00000029480 Orc2Q60862 576 aaKnown RBP14.15□□□□□ -0.14
Prpf38b-201ENSMUST00000029480 Mysm1Q69Z66 819 aa14.15□□□□□ -0.14
Prpf38b-201ENSMUST00000029480 Gm9758Q80ZT2 255 aa14.15□□□□□ -0.14
Prpf38b-201ENSMUST00000029480 Nudt13Q8JZU0 352 aa14.15□□□□□ -0.14
Prpf38b-201ENSMUST00000029480 McmbpQ8R3C0 642 aa14.15□□□□□ -0.14
Prpf38b-201ENSMUST00000029480 Mettl13Q91YR5 698 aa14.15□□□□□ -0.14
Prpf38b-201ENSMUST00000029480 Pdxdc1Q99K01 787 aaKnown RBP14.15□□□□□ -0.14
Prpf38b-201ENSMUST00000029480 Ndufab1Q9CR21 156 aa14.15□□□□□ -0.14
Prpf38b-201ENSMUST00000029480 Tmem206Q9D771 350 aa14.15□□□□□ -0.14
Prpf38b-201ENSMUST00000029480 Clcn2Q9R0A1 908 aa14.15□□□□□ -0.14
Prpf38b-201ENSMUST00000029480 Clip3B9EHT4 547 aa14.15□□□□□ -0.15
Prpf38b-201ENSMUST00000029480 Rfx8D3YU81 596 aa14.15□□□□□ -0.15
Prpf38b-201ENSMUST00000029480 GcgrQ61606 485 aa14.15□□□□□ -0.15
Prpf38b-201ENSMUST00000029480 Tfe3Q64092 572 aaKnown RBP14.15□□□□□ -0.15
Prpf38b-201ENSMUST00000029480 Slc7a6osQ7TPE5 306 aa14.15□□□□□ -0.15
Prpf38b-201ENSMUST00000029480 AdalQ80SY6 360 aa14.15□□□□□ -0.15
Prpf38b-201ENSMUST00000029480 Iffo1Q8BXL9 562 aa14.15□□□□□ -0.15
Prpf38b-201ENSMUST00000029480 Slc14a1Q8VHL0 384 aa14.15□□□□□ -0.15
Prpf38b-201ENSMUST00000029480 AslQ91YI0 464 aa14.15□□□□□ -0.15
Prpf38b-201ENSMUST00000029480 Vwa5aQ99KC8 793 aaKnown RBP14.15□□□□□ -0.15
Prpf38b-201ENSMUST00000029480 Igf2bp3Q9CPN8 579 aaKnown RBP14.15□□□□□ -0.15
Prpf38b-201ENSMUST00000029480 Mrfap1Q9CQL7 125 aa14.15□□□□□ -0.15
Prpf38b-201ENSMUST00000029480 Orc3Q9JK30 715 aaKnown RBP14.15□□□□□ -0.15
Prpf38b-201ENSMUST00000029480 Pdk2Q9JK42 407 aa14.15□□□□□ -0.15
Prpf38b-201ENSMUST00000029480 Gfpt2Q9Z2Z9 682 aa14.15□□□□□ -0.15
Prpf38b-201ENSMUST00000029480 Samd15F6XZJ7 620 aa14.14□□□□□ -0.15
Prpf38b-201ENSMUST00000029480 AdkP55264 361 aa14.14□□□□□ -0.15
Prpf38b-201ENSMUST00000029480 Polr2fP61219 127 aa14.14□□□□□ -0.15
Prpf38b-201ENSMUST00000029480 Ly9Q01965 654 aa14.14□□□□□ -0.15
Prpf38b-201ENSMUST00000029480 MlxipQ2VPU4 917 aa14.14□□□□□ -0.15
Prpf38b-201ENSMUST00000029480 Six1Q62231 284 aa14.14□□□□□ -0.15
Prpf38b-201ENSMUST00000029480 Lsm8Q6ZWM4 96 aaKnown RBP14.14□□□□□ -0.15
Prpf38b-201ENSMUST00000029480 Nrbp2Q91V36 499 aa14.14□□□□□ -0.15
Prpf38b-201ENSMUST00000029480 Grhl1Q921D9 618 aa14.14□□□□□ -0.15
Prpf38b-201ENSMUST00000029480 Ubxn2aQ99KJ0 258 aa14.14□□□□□ -0.15
Prpf38b-201ENSMUST00000029480 Tubgcp4Q9D4F8 667 aa14.14□□□□□ -0.15
Prpf38b-201ENSMUST00000029480 GgcxQ9QYC7 757 aa14.14□□□□□ -0.15
Prpf38b-201ENSMUST00000029480 2210011C24RikA0A087WQ89 206 aa14.14□□□□□ -0.15
Prpf38b-201ENSMUST00000029480 Fbf1A2A870 1173 aa14.14□□□□□ -0.15
Prpf38b-201ENSMUST00000029480 Ncf2O70145 525 aa14.14□□□□□ -0.15
Prpf38b-201ENSMUST00000029480 Ap1m1P35585 423 aa14.14□□□□□ -0.15
Prpf38b-201ENSMUST00000029480 Scaf8Q6DID3 1268 aa14.14□□□□□ -0.15
Prpf38b-201ENSMUST00000029480 TbckQ8BM85 762 aa14.14□□□□□ -0.15
Prpf38b-201ENSMUST00000029480 Tbl3Q8C4J7 801 aaKnown RBP14.14□□□□□ -0.15
Prpf38b-201ENSMUST00000029480 Btbd7Q8CFE5 1130 aa14.14□□□□□ -0.15
Prpf38b-201ENSMUST00000029480 Trpm8Q8R4D5 1104 aa14.14□□□□□ -0.15
Prpf38b-201ENSMUST00000029480 Caskin2Q8VHK1 1201 aa14.14□□□□□ -0.15
Prpf38b-201ENSMUST00000029480 YwhabQ9CQV8 246 aaKnown RBP14.14□□□□□ -0.15
Prpf38b-201ENSMUST00000029480 Ssu72Q9CY97 194 aaKnown RBP14.14□□□□□ -0.15
Prpf38b-201ENSMUST00000029480 Slc35g2D3YVE8 412 aa14.13□□□□□ -0.15
Prpf38b-201ENSMUST00000029480 Fignl2J3QK54 644 aa14.13□□□□□ -0.15
Prpf38b-201ENSMUST00000029480 Slc27a2O35488 620 aa14.13□□□□□ -0.15
Prpf38b-201ENSMUST00000029480 ArP19091 899 aa14.13□□□□□ -0.15
Prpf38b-201ENSMUST00000029480 Mier3Q3UHF3 551 aa14.13□□□□□ -0.15
Prpf38b-201ENSMUST00000029480 Abhd15Q5F2F2 459 aa14.13□□□□□ -0.15
Prpf38b-201ENSMUST00000029480 Mtus1Q5HZI1 1210 aa14.13□□□□□ -0.15
Prpf38b-201ENSMUST00000029480 Stip1Q60864 543 aaKnown RBP14.13□□□□□ -0.15
Prpf38b-201ENSMUST00000029480 Ddx55Q6ZPL9 600 aaKnown RBP14.13□□□□□ -0.15
Prpf38b-201ENSMUST00000029480 R3hdm2Q80TM6 1044 aaKnown RBP14.13□□□□□ -0.15
Prpf38b-201ENSMUST00000029480 1700016G14RikA0A286YCZ6 238 aa14.13□□□□□ -0.15
Prpf38b-201ENSMUST00000029480 Cfap221A9Q751 836 aa14.13□□□□□ -0.15
Prpf38b-201ENSMUST00000029480 Itga9B8JK39 1036 aa14.13□□□□□ -0.15
Prpf38b-201ENSMUST00000029480 Gimap9G3X987 291 aa14.13□□□□□ -0.15
Prpf38b-201ENSMUST00000029480 CaluO35887 315 aa14.13□□□□□ -0.15
Prpf38b-201ENSMUST00000029480 Chmp6P0C0A3 200 aa14.13□□□□□ -0.15
Prpf38b-201ENSMUST00000029480 Spink5Q148R4 1017 aa14.13□□□□□ -0.15
Prpf38b-201ENSMUST00000029480 RetsatQ64FW2 609 aa14.13□□□□□ -0.15
Prpf38b-201ENSMUST00000029480 Sv2cQ69ZS6 727 aa14.13□□□□□ -0.15
Prpf38b-201ENSMUST00000029480 Supt20hQ7TT00 530 aaKnown RBP14.13□□□□□ -0.15
Prpf38b-201ENSMUST00000029480 Zfp438Q8BFX2 798 aa14.13□□□□□ -0.15
Prpf38b-201ENSMUST00000029480 Tmem117Q8BH18 514 aa14.13□□□□□ -0.15
Prpf38b-201ENSMUST00000029480 L3mbtl3Q8BLB7 883 aa14.13□□□□□ -0.15
Prpf38b-201ENSMUST00000029480 Myef2Q8C854 591 aaKnown RBP14.13□□□□□ -0.15
Prpf38b-201ENSMUST00000029480 Vps37cQ8R105 352 aa14.13□□□□□ -0.15
Prpf38b-201ENSMUST00000029480 Senp2Q91ZX6 588 aa14.13□□□□□ -0.15
Prpf38b-201ENSMUST00000029480 Xpo5Q924C1 1204 aaKnown RBP14.13□□□□□ -0.15
Prpf38b-201ENSMUST00000029480 Slc39a3Q99K24 317 aa14.13□□□□□ -0.15
Prpf38b-201ENSMUST00000029480 Tsnaxip1Q99P25 704 aa14.13□□□□□ -0.15
Prpf38b-201ENSMUST00000029480 Gm45194A0A140LJG2 572 aa14.12□□□□□ -0.15
Prpf38b-201ENSMUST00000029480 Mmrn1B2RPV6 1210 aa14.12□□□□□ -0.15
Prpf38b-201ENSMUST00000029480 Cyth3O08967 399 aa14.12□□□□□ -0.15
Prpf38b-201ENSMUST00000029480 Vti1aO89116 217 aa14.12□□□□□ -0.15
Prpf38b-201ENSMUST00000029480 PtpraP18052 829 aa14.12□□□□□ -0.15
Prpf38b-201ENSMUST00000029480 Tarbp2P97473 365 aa14.12□□□□□ -0.15
Retrieved 100 of 22,080 RNA–protein pairs in 23.5 ms