RNA–Protein interactions for RNA: ENSMUST00000029414.11

Ssr3-201, Transcript of Translocon-associated protein subunit gamma, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ssr3, Length 2,957 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr3-201ENSMUST00000029414 Gm7168A0AUV4 508 aa8.63□□□□□ -1.03
Ssr3-201ENSMUST00000029414 Ccdc173A0JLY1 547 aa8.63□□□□□ -1.03
Ssr3-201ENSMUST00000029414 Zscan25B2RX31 543 aa8.63□□□□□ -1.03
Ssr3-201ENSMUST00000029414 Ndufs6P52503 116 aa8.63□□□□□ -1.03
Ssr3-201ENSMUST00000029414 Dbx1P52950 335 aa8.63□□□□□ -1.03
Ssr3-201ENSMUST00000029414 B3gat3P58158 335 aa8.63□□□□□ -1.03
Ssr3-201ENSMUST00000029414 Tnfaip8l3Q3TBL6 204 aa8.63□□□□□ -1.03
Ssr3-201ENSMUST00000029414 LpoQ5SW46 710 aa8.63□□□□□ -1.03
Ssr3-201ENSMUST00000029414 SkiQ60698 725 aa8.63□□□□□ -1.03
Ssr3-201ENSMUST00000029414 Nr2e1Q64104 385 aa8.63□□□□□ -1.03
Ssr3-201ENSMUST00000029414 Herc4Q6PAV2 1057 aa8.63□□□□□ -1.03
Ssr3-201ENSMUST00000029414 Rpf1Q7TND5 349 aaKnown RBP8.63□□□□□ -1.03
Ssr3-201ENSMUST00000029414 SowahaQ8BLS7 548 aa8.63□□□□□ -1.03
Ssr3-201ENSMUST00000029414 Rpp40Q8R1F9 363 aa8.63□□□□□ -1.03
Ssr3-201ENSMUST00000029414 Slc13a3Q91Y63 600 aa8.63□□□□□ -1.03
Ssr3-201ENSMUST00000029414 Tubgcp4Q9D4F8 667 aa8.63□□□□□ -1.03
Ssr3-201ENSMUST00000029414 Polr2dQ9D7M8 142 aaKnown RBP8.63□□□□□ -1.03
Ssr3-201ENSMUST00000029414 Padi3Q9Z184 664 aa8.63□□□□□ -1.03
Ssr3-201ENSMUST00000029414 Ly6g6dQ9Z1Q3 135 aa8.63□□□□□ -1.03
Ssr3-201ENSMUST00000029414 Col12a1Q60847 3120 aa8.62□□□□□ -1.03
Ssr3-201ENSMUST00000029414 Ccdc112A0AUP1 442 aa8.62□□□□□ -1.03
Ssr3-201ENSMUST00000029414 Wfdc11A2A5H7 82 aa8.62□□□□□ -1.03
Ssr3-201ENSMUST00000029414 Nlgn4lB0F2B4 945 aa8.62□□□□□ -1.03
Ssr3-201ENSMUST00000029414 Apol10bG3X9K7 334 aa8.62□□□□□ -1.03
Ssr3-201ENSMUST00000029414 MsnP26041 577 aaKnown RBP8.62□□□□□ -1.03
Ssr3-201ENSMUST00000029414 Pla2g4aP47713 748 aa8.62□□□□□ -1.03
Ssr3-201ENSMUST00000029414 Ube2hP62257 183 aa8.62□□□□□ -1.03
Ssr3-201ENSMUST00000029414 Cracr2aQ3UP38 310 aa8.62□□□□□ -1.03
Ssr3-201ENSMUST00000029414 Elavl4Q61701 385 aaKnown RBP8.62□□□□□ -1.03
Ssr3-201ENSMUST00000029414 Dhx37Q6NZL1 1150 aa8.62□□□□□ -1.03
Ssr3-201ENSMUST00000029414 Znf507Q6ZPY5 941 aa8.62□□□□□ -1.03
Ssr3-201ENSMUST00000029414 Olfr412Q7TRW7 312 aa8.62□□□□□ -1.03
Ssr3-201ENSMUST00000029414 Fgd5Q80UZ0 1219 aa8.62□□□□□ -1.03
Ssr3-201ENSMUST00000029414 Q8BHR8 331 aa8.62□□□□□ -1.03
Ssr3-201ENSMUST00000029414 TbckQ8BM85 762 aa8.62□□□□□ -1.03
Ssr3-201ENSMUST00000029414 Plekhs1Q8BW88 474 aa8.62□□□□□ -1.03
Ssr3-201ENSMUST00000029414 Ago2Q8CJG0 860 aaKnown RBP8.62□□□□□ -1.03
Ssr3-201ENSMUST00000029414 Trim61Q8JZK6 461 aa8.62□□□□□ -1.03
Ssr3-201ENSMUST00000029414 Art3Q8R2G4 371 aa8.62□□□□□ -1.03
Ssr3-201ENSMUST00000029414 Atoh8Q99NA2 322 aa8.62□□□□□ -1.03
Ssr3-201ENSMUST00000029414 Gins2Q9D600 185 aa8.62□□□□□ -1.03
Ssr3-201ENSMUST00000029414 Prl2b1Q9DAZ2 228 aa8.62□□□□□ -1.03
Ssr3-201ENSMUST00000029414 Fam170bE9PXT9 378 aa8.62□□□□□ -1.03
Ssr3-201ENSMUST00000029414 Olfr743L7N1Y2 311 aa8.62□□□□□ -1.03
Ssr3-201ENSMUST00000029414 Dapk3O54784 448 aa8.62□□□□□ -1.03
Ssr3-201ENSMUST00000029414 Eif3dO70194 548 aaKnown RBP8.62□□□□□ -1.03
Ssr3-201ENSMUST00000029414 AdssP46664 456 aa8.62□□□□□ -1.03
Ssr3-201ENSMUST00000029414 Ppp3ccP48455 513 aa8.62□□□□□ -1.03
Ssr3-201ENSMUST00000029414 Fbxw11Q5SRY7 542 aaKnown RBP8.62□□□□□ -1.03
Ssr3-201ENSMUST00000029414 Atp1a3Q6PIC6 1013 aa8.62□□□□□ -1.03
Ssr3-201ENSMUST00000029414 TbataQ7TSD4 393 aa8.62□□□□□ -1.03
Ssr3-201ENSMUST00000029414 MogsQ80UM7 834 aaKnown RBP8.62□□□□□ -1.03
Ssr3-201ENSMUST00000029414 Syn3Q8JZP2 579 aa8.62□□□□□ -1.03
Ssr3-201ENSMUST00000029414 Calhm5Q8R100 309 aa8.62□□□□□ -1.03
Ssr3-201ENSMUST00000029414 Olfr345Q8VGK4 311 aa8.62□□□□□ -1.03
Ssr3-201ENSMUST00000029414 Ankef1Q9D2J7 775 aa8.62□□□□□ -1.03
Ssr3-201ENSMUST00000029414 Tmem86aQ9D8N3 241 aa8.62□□□□□ -1.03
Ssr3-201ENSMUST00000029414 Bscl2Q9Z2E9 383 aa8.62□□□□□ -1.03
Ssr3-201ENSMUST00000029414 Pcdh11xF6ZNL5 1338 aa8.62□□□□□ -1.03
Ssr3-201ENSMUST00000029414 Kif3aP28741 701 aa8.61□□□□□ -1.03
Ssr3-201ENSMUST00000029414 Nol4P60954 483 aa8.61□□□□□ -1.03
Ssr3-201ENSMUST00000029414 Hoxd13P70217 339 aa8.61□□□□□ -1.03
Ssr3-201ENSMUST00000029414 Grin2cQ01098 1239 aa8.61□□□□□ -1.03
Ssr3-201ENSMUST00000029414 Pwwp2aQ69Z61 730 aa8.61□□□□□ -1.03
Ssr3-201ENSMUST00000029414 Cpa4Q6P8K8 420 aa8.61□□□□□ -1.03
Ssr3-201ENSMUST00000029414 E2f7Q6S7F2 904 aa8.61□□□□□ -1.03
Ssr3-201ENSMUST00000029414 Thnsl1Q8BH55 747 aa8.61□□□□□ -1.03
Ssr3-201ENSMUST00000029414 Gpr158Q8C419 1200 aa8.61□□□□□ -1.03
Ssr3-201ENSMUST00000029414 Gas2l1Q8JZP9 678 aa8.61□□□□□ -1.03
Ssr3-201ENSMUST00000029414 Ankrd49Q8VE42 238 aa8.61□□□□□ -1.03
Ssr3-201ENSMUST00000029414 Asb7Q91ZU0 318 aa8.61□□□□□ -1.03
Ssr3-201ENSMUST00000029414 Syt12Q920N7 421 aa8.61□□□□□ -1.03
Ssr3-201ENSMUST00000029414 SdhbQ9CQA3 282 aa8.61□□□□□ -1.03
Ssr3-201ENSMUST00000029414 Prl2c5Q9JLV9 222 aa8.61□□□□□ -1.03
Ssr3-201ENSMUST00000029414 Kcnh3Q9WVJ0 1095 aa8.61□□□□□ -1.03
Ssr3-201ENSMUST00000029414 Vps13aQ5H8C4 3166 aa8.61□□□□□ -1.03
Ssr3-201ENSMUST00000029414 Gm13276A0A087WR18 182 aa8.61□□□□□ -1.03
Ssr3-201ENSMUST00000029414 IapP03975 557 aa8.61□□□□□ -1.03
Ssr3-201ENSMUST00000029414 Brcc3P46737 291 aa8.61□□□□□ -1.03
Ssr3-201ENSMUST00000029414 Slc26a1P58735 704 aa8.61□□□□□ -1.03
Ssr3-201ENSMUST00000029414 Rin3P59729 980 aa8.61□□□□□ -1.03
Ssr3-201ENSMUST00000029414 Fut7Q11131 389 aa8.61□□□□□ -1.03
Ssr3-201ENSMUST00000029414 Nlrp4cQ3TKR3 982 aa8.61□□□□□ -1.03
Ssr3-201ENSMUST00000029414 UrgcpQ5NCI0 926 aa8.61□□□□□ -1.03
Ssr3-201ENSMUST00000029414 Asic1Q6NXK8 526 aa8.61□□□□□ -1.03
Ssr3-201ENSMUST00000029414 Clec16aQ80U30 1036 aa8.61□□□□□ -1.03
Ssr3-201ENSMUST00000029414 RimklbQ80WS1 387 aa8.61□□□□□ -1.03
Ssr3-201ENSMUST00000029414 Zbtb24Q80X44 710 aa8.61□□□□□ -1.03
Ssr3-201ENSMUST00000029414 Clic6Q8BHB9 596 aa8.61□□□□□ -1.03
Ssr3-201ENSMUST00000029414 Rbm41Q8JZV4 413 aa8.61□□□□□ -1.03
Ssr3-201ENSMUST00000029414 Tbc1d22aQ8R5A6 516 aa8.61□□□□□ -1.03
Ssr3-201ENSMUST00000029414 Rpl17Q9CPR4 184 aaKnown RBP8.61□□□□□ -1.03
Ssr3-201ENSMUST00000029414 Gm43638A0A0J9YU36 694 aa8.61□□□□□ -1.03
Ssr3-201ENSMUST00000029414 Fibcd1A2AV25 459 aa8.61□□□□□ -1.03
Ssr3-201ENSMUST00000029414 Herc3A6H6S0 1050 aa8.61□□□□□ -1.03
Ssr3-201ENSMUST00000029414 4930402K13RikB1AW18 415 aa8.61□□□□□ -1.03
Ssr3-201ENSMUST00000029414 Gm9992B2RWK3 458 aa8.61□□□□□ -1.03
Ssr3-201ENSMUST00000029414 Akap3O88987 864 aa8.61□□□□□ -1.03
Ssr3-201ENSMUST00000029414 Pax3P24610 479 aa8.61□□□□□ -1.03
Ssr3-201ENSMUST00000029414 Sash1P59808 1230 aa8.61□□□□□ -1.03
Retrieved 100 of 22,080 RNA–protein pairs in 17 ms