RNA–Protein interactions for RNA: YOR066W

MSA1, Transcript of Activator of G1-specific transcription factors MBF and SBF, yeast

Gene MSA1, Length 1,890 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
MSA1	YOR066W	MIC12	P38341	106 aa		3.03	□□□□□ -1.92
MSA1	YOR066W	RSM27	P53305	110 aa		3.03	□□□□□ -1.92
MSA1	YOR066W	RHO3	Q00245	231 aa	Known RBP	3.03	□□□□□ -1.92
MSA1	YOR066W	YPL039W	Q03080	316 aa		3.03	□□□□□ -1.92
MSA1	YOR066W	YPS3	Q12303	508 aa		3.03	□□□□□ -1.92
MSA1	YOR066W	IES3	Q12345	250 aa		3.03	□□□□□ -1.92
MSA1	YOR066W	YKL075C	P36083	450 aa		3.03	□□□□□ -1.93
MSA1	YOR066W	TRM7	P38238	310 aa	Known RBP	3.03	□□□□□ -1.93
MSA1	YOR066W	CGR1	P53188	120 aa		3.03	□□□□□ -1.93
MSA1	YOR066W	CDC36	P06100	191 aa	Predicted RBP	3.02	□□□□□ -1.93
MSA1	YOR066W	DRE2	P36152	348 aa		3.02	□□□□□ -1.93
MSA1	YOR066W	RIB1	P38066	345 aa		3.02	□□□□□ -1.93
MSA1	YOR066W	RTC3	P38804	111 aa	Predicted RBP	3.02	□□□□□ -1.93
MSA1	YOR066W	YFR045W	P43617	309 aa		3.02	□□□□□ -1.93
MSA1	YOR066W	CPR7	P47103	393 aa		3.02	□□□□□ -1.93
MSA1	YOR066W	MRH4	P53166	561 aa		3.02	□□□□□ -1.93
MSA1	YOR066W	YBL112C	Q3E7Y4	105 aa		3.02	□□□□□ -1.93
MSA1	YOR066W	YOL163W	P0CF20	169 aa		3.01	□□□□□ -1.93
MSA1	YOR066W	YMR31	P19955	123 aa		3.01	□□□□□ -1.93
MSA1	YOR066W	MRPL39	P36533	70 aa		3.01	□□□□□ -1.93
MSA1	YOR066W	MAL32	P38158	584 aa		3.01	□□□□□ -1.93
MSA1	YOR066W	SIP3	P38717	1229 aa		3.01	□□□□□ -1.93
MSA1	YOR066W	YHR127W	P38833	243 aa	Known RBP	3.01	□□□□□ -1.93
MSA1	YOR066W	COX15	P40086	486 aa		3.01	□□□□□ -1.93
MSA1	YOR066W	YRB1	P41920	201 aa	Known RBP	3.01	□□□□□ -1.93
MSA1	YOR066W	NIF3	P53081	288 aa		3.01	□□□□□ -1.93
MSA1	YOR066W	MAL12	P53341	584 aa		3.01	□□□□□ -1.93
MSA1	YOR066W	BNA7	Q04066	261 aa		3.01	□□□□□ -1.93
MSA1	YOR066W	YBL008W-A	Q3E821	79 aa		3.01	□□□□□ -1.93
MSA1	YOR066W	NCB2	Q92317	146 aa		3.01	□□□□□ -1.93
MSA1	YOR066W	BCK1	Q01389	1478 aa		3.01	□□□□□ -1.93
MSA1	YOR066W	SPL2	P38839	148 aa		3.01	□□□□□ -1.93
MSA1	YOR066W	SUR2	P38992	349 aa		3.01	□□□□□ -1.93
MSA1	YOR066W	YHB1	P39676	399 aa	Known RBP	3.01	□□□□□ -1.93
MSA1	YOR066W	SEI1	Q06058	285 aa		3.01	□□□□□ -1.93
MSA1	YOR066W	YOL019W	Q08157	551 aa		3.01	□□□□□ -1.93
MSA1	YOR066W	RRP40	Q08285	240 aa	Known RBP	3.01	□□□□□ -1.93
MSA1	YOR066W	SYC1	Q08553	188 aa	Predicted RBP	3.01	□□□□□ -1.93
MSA1	YOR066W	YLR126C	Q12288	251 aa		3.01	□□□□□ -1.93
MSA1	YOR066W	PRR2	Q12310	699 aa		3.01	□□□□□ -1.93
MSA1	YOR066W	SEY1	Q99287	776 aa		3.01	□□□□□ -1.93
MSA1	YOR066W	YEL009C-A	A0A023PZF2	135 aa		3	□□□□□ -1.93
MSA1	YOR066W	DPB2	P24482	689 aa	Predicted RBP	3	□□□□□ -1.93
MSA1	YOR066W	CDC10	P25342	322 aa	Known RBP	3	□□□□□ -1.93
MSA1	YOR066W	GDH2	P33327	1092 aa	Known RBP	3	□□□□□ -1.93
MSA1	YOR066W	URA8	P38627	578 aa	Predicted RBP	3	□□□□□ -1.93
MSA1	YOR066W	YIR035C	P40579	254 aa		3	□□□□□ -1.93
MSA1	YOR066W	YDR124W	Q04608	324 aa		3	□□□□□ -1.93
MSA1	YOR066W	YDR222W	Q04925	415 aa		3	□□□□□ -1.93
MSA1	YOR066W	SMT3	Q12306	101 aa	Known RBP	3	□□□□□ -1.93
MSA1	YOR066W	YBR121C-A	P0C5L4	52 aa		2.99	□□□□□ -1.93
MSA1	YOR066W	STE18	P18852	110 aa		2.99	□□□□□ -1.93
MSA1	YOR066W	PRP18	P33411	251 aa	Predicted RBP	2.99	□□□□□ -1.93
MSA1	YOR066W	SLX1	P38324	304 aa		2.99	□□□□□ -1.93
MSA1	YOR066W	TEM1	P38987	245 aa		2.99	□□□□□ -1.93
MSA1	YOR066W	ERG28	P40030	148 aa		2.99	□□□□□ -1.93
MSA1	YOR066W	PRE6	P40303	254 aa	Known RBP	2.99	□□□□□ -1.93
MSA1	YOR066W	YOR186W	Q08560	144 aa		2.99	□□□□□ -1.93
MSA1	YOR066W	YPR063C	Q12160	140 aa		2.99	□□□□□ -1.93
MSA1	YOR066W	ISD11	Q6Q560	94 aa		2.99	□□□□□ -1.93
MSA1	YOR066W	BMH1	P29311	267 aa	Known RBP	2.99	□□□□□ -1.93
MSA1	YOR066W	NTF2	P33331	125 aa	Known RBP	2.99	□□□□□ -1.93
MSA1	YOR066W	CBT1	P36038	271 aa	Predicted RBP	2.99	□□□□□ -1.93
MSA1	YOR066W	CAB3	P36076	571 aa		2.99	□□□□□ -1.93
MSA1	YOR066W	YJL028W	P47062	111 aa		2.99	□□□□□ -1.93
MSA1	YOR066W	OST3	P48439	350 aa		2.99	□□□□□ -1.93
MSA1	YOR066W	RAD17	P48581	401 aa		2.99	□□□□□ -1.93
MSA1	YOR066W	YGL034C	P53186	121 aa		2.99	□□□□□ -1.93
MSA1	YOR066W	GOT1	Q03554	138 aa		2.99	□□□□□ -1.93
MSA1	YOR066W	CDC123	Q05791	360 aa		2.99	□□□□□ -1.93
MSA1	YOR066W	PDR11	P40550	1411 aa		2.98	□□□□□ -1.93
MSA1	YOR066W	CDC33	P07260	213 aa	Known RBP	2.98	□□□□□ -1.93
MSA1	YOR066W	SSO1	P32867	290 aa		2.98	□□□□□ -1.93
MSA1	YOR066W	SSH1	P38353	490 aa	Known RBP	2.98	□□□□□ -1.93
MSA1	YOR066W	ECO1	P43605	281 aa		2.98	□□□□□ -1.93
MSA1	YOR066W	ALG9	P53868	555 aa	Known RBP	2.98	□□□□□ -1.93
MSA1	YOR066W	EMI1	Q04406	187 aa		2.98	□□□□□ -1.93
MSA1	YOR066W	YPR011C	Q12251	326 aa		2.98	□□□□□ -1.93
MSA1	YOR066W	YKL183C-A	Q3E765	70 aa		2.98	□□□□□ -1.93
MSA1	YOR066W	PDR5	P33302	1511 aa	Known RBP	2.97	□□□□□ -1.93
MSA1	YOR066W	JIP3	O13555	125 aa		2.97	□□□□□ -1.93
MSA1	YOR066W	AST1	P35183	429 aa		2.97	□□□□□ -1.93
MSA1	YOR066W	YMR144W	P40214	342 aa	Known RBP	2.97	□□□□□ -1.93
MSA1	YOR066W	MCM22	P47167	239 aa		2.97	□□□□□ -1.93
MSA1	YOR066W	TRM9	P49957	279 aa		2.97	□□□□□ -1.93
MSA1	YOR066W	MIG2	P53035	382 aa		2.97	□□□□□ -1.93
MSA1	YOR066W	TIM22	Q12328	207 aa		2.97	□□□□□ -1.93
MSA1	YOR066W	BCY1	P07278	416 aa	Known RBP	2.96	□□□□□ -1.93
MSA1	YOR066W	SFC1	P33303	322 aa		2.96	□□□□□ -1.93
MSA1	YOR066W	ECM13	P38195	257 aa		2.96	□□□□□ -1.93
MSA1	YOR066W	YIL059C	P40520	121 aa		2.96	□□□□□ -1.93
MSA1	YOR066W	YJR149W	P47177	404 aa		2.96	□□□□□ -1.93
MSA1	YOR066W	MRPS17	Q03246	237 aa	Predicted RBP	2.96	□□□□□ -1.93
MSA1	YOR066W	SLD7	Q08457	257 aa		2.96	□□□□□ -1.93
MSA1	YOR066W	PST1	Q12355	444 aa		2.96	□□□□□ -1.93
MSA1	YOR066W	SPT3	P06844	337 aa		2.96	□□□□□ -1.94
MSA1	YOR066W	ZWF1	P11412	505 aa	Known RBP	2.96	□□□□□ -1.94
MSA1	YOR066W	SNA3	P14359	133 aa		2.96	□□□□□ -1.94
MSA1	YOR066W	TOM40	P23644	387 aa	Known RBP	2.96	□□□□□ -1.94
MSA1	YOR066W	TKL2	P33315	681 aa		2.96	□□□□□ -1.94

Retrieved 100 of 5,963 RNA–protein pairs in 14.8 ms