RNA–Protein interactions for RNA: YNL232W

CSL4, Transcript of Exosome non-catalytic core component, yeast

Gene CSL4, Length 879 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CSL4	YNL232W	POP7	P38291	140 aa		4.67	□□□□□ -1.66
CSL4	YNL232W	SUR2	P38992	349 aa		4.67	□□□□□ -1.66
CSL4	YNL232W	FIP1	P45976	327 aa		4.67	□□□□□ -1.66
CSL4	YNL232W	NUP49	Q02199	472 aa		4.67	□□□□□ -1.66
CSL4	YNL232W	YMR102C	Q03177	834 aa		4.67	□□□□□ -1.66
CSL4	YNL232W	SFH1	Q06168	426 aa		4.67	□□□□□ -1.66
CSL4	YNL232W	IZH3	Q07959	543 aa		4.67	□□□□□ -1.66
CSL4	YNL232W	GSH2	Q08220	491 aa		4.67	□□□□□ -1.66
CSL4	YNL232W	SPC3	Q12133	184 aa		4.67	□□□□□ -1.66
CSL4	YNL232W	RRI1	Q12468	440 aa		4.67	□□□□□ -1.66
CSL4	YNL232W	TFB5	Q3E7C1	72 aa	Predicted RBP	4.67	□□□□□ -1.66
CSL4	YNL232W	ARG80	P07249	177 aa		4.66	□□□□□ -1.66
CSL4	YNL232W	DEG1	P31115	442 aa	Known RBP	4.66	□□□□□ -1.66
CSL4	YNL232W	SSO2	P39926	295 aa		4.66	□□□□□ -1.66
CSL4	YNL232W	RMD6	P39975	231 aa		4.66	□□□□□ -1.66
CSL4	YNL232W	IDS2	P46958	469 aa		4.66	□□□□□ -1.66
CSL4	YNL232W	MIG2	P53035	382 aa		4.66	□□□□□ -1.66
CSL4	YNL232W	YGL117W	P53133	265 aa		4.66	□□□□□ -1.66
CSL4	YNL232W	RSM23	Q01163	450 aa		4.66	□□□□□ -1.66
CSL4	YNL232W	ABZ2	Q03266	374 aa		4.66	□□□□□ -1.66
CSL4	YNL232W	DYN3	Q04949	312 aa		4.66	□□□□□ -1.66
CSL4	YNL232W	SPC2	Q04969	178 aa		4.66	□□□□□ -1.66
CSL4	YNL232W	YDL114W	Q07530	308 aa		4.66	□□□□□ -1.66
CSL4	YNL232W	SYC1	Q08553	188 aa	Predicted RBP	4.66	□□□□□ -1.66
CSL4	YNL232W	MRPL23	Q12487	163 aa	Predicted RBP	4.66	□□□□□ -1.66
CSL4	YNL232W	TDH2	P00358	332 aa	Known RBP	4.65	□□□□□ -1.67
CSL4	YNL232W	TDH3	P00359	332 aa	Known RBP RIP-Chip data	4.65	□□□□□ -1.67	not detected
CSL4	YNL232W	SCEI	P03882	235 aa		4.65	□□□□□ -1.67
CSL4	YNL232W	SIR2	P06700	562 aa		4.65	□□□□□ -1.67
CSL4	YNL232W	AFG1	P32317	509 aa		4.65	□□□□□ -1.67
CSL4	YNL232W	RTC3	P38804	111 aa	Predicted RBP	4.65	□□□□□ -1.67
CSL4	YNL232W	EGD2	P38879	174 aa	Known RBP	4.65	□□□□□ -1.67
CSL4	YNL232W	YER085C	P40058	173 aa		4.65	□□□□□ -1.67
CSL4	YNL232W	STB1	P42845	420 aa		4.65	□□□□□ -1.67
CSL4	YNL232W	OTU1	P43558	301 aa		4.65	□□□□□ -1.67
CSL4	YNL232W	RRN9	P53437	365 aa		4.65	□□□□□ -1.67
CSL4	YNL232W	SRL4	Q03085	281 aa		4.65	□□□□□ -1.67
CSL4	YNL232W	DIG2	Q03373	323 aa	Known RBP	4.65	□□□□□ -1.67
CSL4	YNL232W	AIM36	Q03798	255 aa		4.65	□□□□□ -1.67
CSL4	YNL232W	GPI17	Q04080	534 aa		4.65	□□□□□ -1.67
CSL4	YNL232W	GIM5	Q04493	163 aa		4.65	□□□□□ -1.67
CSL4	YNL232W	YPR098C	Q06089	161 aa		4.65	□□□□□ -1.67
CSL4	YNL232W	ISN1	Q99312	450 aa		4.65	□□□□□ -1.67
CSL4	YNL232W	DPM1	P14020	267 aa	Known RBP	4.64	□□□□□ -1.67
CSL4	YNL232W	FRS1	P15624	595 aa	Known RBP	4.64	□□□□□ -1.67
CSL4	YNL232W	CDC23	P16522	626 aa		4.64	□□□□□ -1.67
CSL4	YNL232W	STE18	P18852	110 aa		4.64	□□□□□ -1.67
CSL4	YNL232W	CMK2	P22517	447 aa		4.64	□□□□□ -1.67
CSL4	YNL232W	PET18	P25362	215 aa		4.64	□□□□□ -1.67
CSL4	YNL232W	ERV1	P27882	189 aa		4.64	□□□□□ -1.67
CSL4	YNL232W	TCA17	P32613	152 aa		4.64	□□□□□ -1.67
CSL4	YNL232W	GON7	P46984	123 aa		4.64	□□□□□ -1.67
CSL4	YNL232W	AVT4	P50944	713 aa		4.64	□□□□□ -1.67
CSL4	YNL232W	RMR1	P53060	241 aa		4.64	□□□□□ -1.67
CSL4	YNL232W	CPR8	P53728	308 aa		4.64	□□□□□ -1.67
CSL4	YNL232W	TRI1	Q05024	226 aa		4.64	□□□□□ -1.67
CSL4	YNL232W	RBS1	Q05672	457 aa	Known RBP	4.64	□□□□□ -1.67
CSL4	YNL232W	MRPL51	Q06090	140 aa	Predicted RBP	4.64	□□□□□ -1.67
CSL4	YNL232W	THP3	Q12049	470 aa	Known RBP	4.64	□□□□□ -1.67
CSL4	YNL232W	MHF2	Q3E829	80 aa		4.64	□□□□□ -1.67
CSL4	YNL232W	DFR1	P07807	211 aa	Known RBP RIP-Chip data	4.63	□□□□□ -1.67	not detected
CSL4	YNL232W	DPB2	P24482	689 aa	Predicted RBP	4.63	□□□□□ -1.67
CSL4	YNL232W	PUT3	P25502	979 aa	Predicted RBP	4.63	□□□□□ -1.67
CSL4	YNL232W	MRP20	P32387	263 aa		4.63	□□□□□ -1.67
CSL4	YNL232W	RIB1	P38066	345 aa		4.63	□□□□□ -1.67
CSL4	YNL232W	ARC40	P38328	384 aa	Known RBP	4.63	□□□□□ -1.67
CSL4	YNL232W	VBA2	P38358	474 aa	Known RBP	4.63	□□□□□ -1.67
CSL4	YNL232W	RPA43	P46669	326 aa		4.63	□□□□□ -1.67
CSL4	YNL232W	HAM1	P47119	197 aa	Known RBP	4.63	□□□□□ -1.67
CSL4	YNL232W	YGL101W	P53144	215 aa		4.63	□□□□□ -1.67
CSL4	YNL232W	YNL033W	P53964	284 aa		4.63	□□□□□ -1.67
CSL4	YNL232W	YNL019C	P53975	284 aa		4.63	□□□□□ -1.67
CSL4	YNL232W	NGL1	Q08213	363 aa	Known RBP	4.63	□□□□□ -1.67
CSL4	YNL232W	YDL007C-A	Q2V2Q0	85 aa		4.63	□□□□□ -1.67
CSL4	YNL232W	YLR302C	O13544	120 aa		4.62	□□□□□ -1.67
CSL4	YNL232W	MES1	P00958	751 aa	Known RBP	4.62	□□□□□ -1.67
CSL4	YNL232W	PEX3	P28795	441 aa		4.62	□□□□□ -1.67
CSL4	YNL232W	REC114	P32841	428 aa		4.62	□□□□□ -1.67
CSL4	YNL232W	SOR1	P35497	357 aa	Known RBP	4.62	□□□□□ -1.67
CSL4	YNL232W	RTC2	P38279	296 aa		4.62	□□□□□ -1.67
CSL4	YNL232W	FMC1	P40491	155 aa		4.62	□□□□□ -1.67
CSL4	YNL232W	BNA6	P43619	295 aa		4.62	□□□□□ -1.67
CSL4	YNL232W	CTK2	P46962	323 aa		4.62	□□□□□ -1.67
CSL4	YNL232W	EFM3	P47163	339 aa		4.62	□□□□□ -1.67
CSL4	YNL232W	YGL114W	P53134	725 aa		4.62	□□□□□ -1.67
CSL4	YNL232W	GET1	P53192	235 aa		4.62	□□□□□ -1.67
CSL4	YNL232W	GPI11	Q06636	219 aa		4.62	□□□□□ -1.67
CSL4	YNL232W	SOR2	Q07786	357 aa		4.62	□□□□□ -1.67
CSL4	YNL232W	YJR112W-A	Q3E743	109 aa		4.62	□□□□□ -1.67
CSL4	YNL232W	SGA1	P08019	549 aa		4.61	□□□□□ -1.67
CSL4	YNL232W	MEK1	P24719	497 aa	Predicted RBP	4.61	□□□□□ -1.67
CSL4	YNL232W	PRE4	P30657	266 aa		4.61	□□□□□ -1.67
CSL4	YNL232W	RPC34	P32910	317 aa		4.61	□□□□□ -1.67
CSL4	YNL232W	YRA2	P36036	203 aa	Known RBP RIP-Chip data	4.61	□□□□□ -1.67	not detected
CSL4	YNL232W	SRP102	P36057	244 aa	Predicted RBP	4.61	□□□□□ -1.67
CSL4	YNL232W	YKL070W	P36087	169 aa		4.61	□□□□□ -1.67
CSL4	YNL232W	CIN2	P46670	268 aa		4.61	□□□□□ -1.67
CSL4	YNL232W	RPA34	P47006	233 aa	Predicted RBP	4.61	□□□□□ -1.67
CSL4	YNL232W	YJL016W	P47072	561 aa		4.61	□□□□□ -1.67
CSL4	YNL232W	TMA22	P47089	198 aa	Predicted RBP	4.61	□□□□□ -1.67

Retrieved 100 of 5,963 RNA–protein pairs in 25.9 ms