RNA–Protein interactions for RNA: YML040W

YML040W, Transcript of Retrotransposon TYA Gag gene co-transcribed with TYB Pol, yeastyeast

Gene YML040W, Length 1,323 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YML040WYML040W AGC1Q12482 902 aa3.25□□□□□ -1.89
YML040WYML040W YCL012CQ8J0M4 134 aa3.25□□□□□ -1.89
YML040WYML040W SIR4P11978 1358 aa3.25□□□□□ -1.89
YML040WYML040W CCH1P50077 2039 aa3.25□□□□□ -1.89
YML040WYML040W CHD1P32657 1468 aa3.24□□□□□ -1.89
YML040WYML040W SGA1P08019 549 aa3.24□□□□□ -1.89
YML040WYML040W PEX17P40155 199 aa3.24□□□□□ -1.89
YML040WYML040W RFC4P40339 323 aaKnown RBP3.24□□□□□ -1.89
YML040WYML040W YIL059CP40520 121 aa3.24□□□□□ -1.89
YML040WYML040W PFS2P42841 465 aaKnown RBP3.24□□□□□ -1.89
YML040WYML040W ADO1P47143 340 aaKnown RBP3.24□□□□□ -1.89
YML040WYML040W BRR6P53062 197 aa3.24□□□□□ -1.89
YML040WYML040W RSM10Q03201 203 aa3.24□□□□□ -1.89
YML040WYML040W YLR179CQ06252 201 aaKnown RBP3.24□□□□□ -1.89
YML040WYML040W GEP5Q12393 293 aa3.24□□□□□ -1.89
YML040WYML040W YLR462WO13556 202 aa3.23□□□□□ -1.89
YML040WYML040W URA6P15700 204 aa3.23□□□□□ -1.89
YML040WYML040W SEC22P22214 214 aa3.23□□□□□ -1.89
YML040WYML040W RNP1P32385 249 aa3.23□□□□□ -1.89
YML040WYML040W MGM101P32787 269 aaKnown RBP3.23□□□□□ -1.89
YML040WYML040W SSH1P38353 490 aaKnown RBP3.23□□□□□ -1.89
YML040WYML040W YEL075CP39972 122 aa3.23□□□□□ -1.89
YML040WYML040W SYF2P53277 215 aaPredicted RBP3.23□□□□□ -1.89
YML040WYML040W FYV6P53913 173 aa3.23□□□□□ -1.89
YML040WYML040W YMR226CQ05016 267 aaKnown RBP3.23□□□□□ -1.89
YML040WYML040W ATG38Q05789 226 aaKnown RBP3.23□□□□□ -1.89
YML040WYML040W PST1Q12355 444 aa3.23□□□□□ -1.89
YML040WYML040W JLP1Q12358 412 aa3.23□□□□□ -1.89
YML040WYML040W RPL28P02406 149 aaKnown RBP3.22□□□□□ -1.89
YML040WYML040W MET2P08465 486 aa3.22□□□□□ -1.89
YML040WYML040W RFA3P26755 122 aaKnown RBP3.22□□□□□ -1.89
YML040WYML040W SNZ1Q03148 297 aa3.22□□□□□ -1.89
YML040WYML040W TLG1Q03322 224 aa3.22□□□□□ -1.89
YML040WYML040W YOR268CQ08734 132 aa3.22□□□□□ -1.89
YML040WYML040W MRX4Q12467 430 aa3.22□□□□□ -1.89
YML040WYML040W RAD10P06838 210 aa3.21□□□□□ -1.89
YML040WYML040W YPK2P18961 677 aa3.21□□□□□ -1.89
YML040WYML040W IKI1P38874 309 aa3.21□□□□□ -1.89
YML040WYML040W FAR8Q05040 523 aa3.21□□□□□ -1.89
YML040WYML040W YLR030WQ07967 263 aa3.21□□□□□ -1.89
YML040WYML040W MATALPHA2P0CY08 210 aa3.2□□□□□ -1.9
YML040WYML040W HMLALPHA2P0CY09 210 aa3.2□□□□□ -1.9
YML040WYML040W FMT1P32785 401 aa3.2□□□□□ -1.9
YML040WYML040W YER084WP40057 128 aa3.2□□□□□ -1.9
YML040WYML040W CAT5P41735 233 aa3.2□□□□□ -1.9
YML040WYML040W BUD13P46947 266 aaPredicted RBP3.2□□□□□ -1.9
YML040WYML040W YGL159WP53110 370 aa3.2□□□□□ -1.9
YML040WYML040W GIM3P53900 129 aa3.2□□□□□ -1.9
YML040WYML040W INM2Q05533 292 aa3.2□□□□□ -1.9
YML040WYML040W HEM25Q07534 307 aa3.2□□□□□ -1.9
YML040WYML040W SLD7Q08457 257 aa3.2□□□□□ -1.9
YML040WYML040W ABP140Q08641 628 aaKnown RBP3.2□□□□□ -1.9
YML040WYML040W YRA1Q12159 226 aaKnown RBP3.2□□□□□ -1.9
YML040WYML040W CDC28P00546 298 aaKnown RBP3.19□□□□□ -1.9
YML040WYML040W HTB1P02293 131 aaKnown RBP3.19□□□□□ -1.9
YML040WYML040W HTB2P02294 131 aa3.19□□□□□ -1.9
YML040WYML040W CBF1P17106 351 aa3.19□□□□□ -1.9
YML040WYML040W APA2P22108 325 aa3.19□□□□□ -1.9
YML040WYML040W DBF2P22204 572 aa3.19□□□□□ -1.9
YML040WYML040W ASF2P32448 525 aaPredicted RBP3.19□□□□□ -1.9
YML040WYML040W MSA2P36157 363 aa3.19□□□□□ -1.9
YML040WYML040W RPA43P46669 326 aa3.19□□□□□ -1.9
YML040WYML040W IRC18P47056 224 aa3.19□□□□□ -1.9
YML040WYML040W NOP19P53317 196 aaPredicted RBP3.19□□□□□ -1.9
YML040WYML040W YPR195CQ06594 109 aa3.19□□□□□ -1.9
YML040WYML040W TUS1Q06412 1307 aa3.19□□□□□ -1.9
YML040WYML040W IDH1P28834 360 aaKnown RBP RIP-Chip data3.19□□□□□ -1.9not detected
YML040WYML040W ERG24P32462 438 aaKnown RBP3.19□□□□□ -1.9
YML040WYML040W RCN1P36054 211 aa3.19□□□□□ -1.9
YML040WYML040W PIR5P46999 287 aa3.19□□□□□ -1.9
YML040WYML040W ERV29P53337 310 aa3.19□□□□□ -1.9
YML040WYML040W DID2P69771 204 aa3.19□□□□□ -1.9
YML040WYML040W FEX1Q08913 375 aa3.19□□□□□ -1.9
YML040WYML040W FEX2Q08991 375 aa3.19□□□□□ -1.9
YML040WYML040W QCR7P00128 127 aa3.18□□□□□ -1.9
YML040WYML040W IPP1P00817 287 aaKnown RBP3.18□□□□□ -1.9
YML040WYML040W COS8P38723 381 aa3.18□□□□□ -1.9
YML040WYML040W GTR2P53290 341 aa3.18□□□□□ -1.9
YML040WYML040W CAB4P53332 305 aa3.18□□□□□ -1.9
YML040WYML040W PDR17P53844 350 aa3.18□□□□□ -1.9
YML040WYML040W COX5AP00424 153 aa3.17□□□□□ -1.9
YML040WYML040W KRE1P17260 313 aa3.17□□□□□ -1.9
YML040WYML040W ADE1P27616 306 aa3.17□□□□□ -1.9
YML040WYML040W OAC1P32332 324 aa3.17□□□□□ -1.9
YML040WYML040W RPF1P38805 295 aaKnown RBP3.17□□□□□ -1.9
YML040WYML040W OST2P46964 130 aa3.17□□□□□ -1.9
YML040WYML040W GON7P46984 123 aa3.17□□□□□ -1.9
YML040WYML040W ILM1P47155 203 aa3.17□□□□□ -1.9
YML040WYML040W RMR1P53060 241 aa3.17□□□□□ -1.9
YML040WYML040W NIP7Q08962 181 aaKnown RBP3.17□□□□□ -1.9
YML040WYML040W HTL1Q9URQ5 78 aa3.17□□□□□ -1.9
YML040WYML040W SAC3P46674 1301 aa3.16□□□□□ -1.9
YML040WYML040W DPM1P14020 267 aaKnown RBP3.16□□□□□ -1.9
YML040WYML040W YPT52P36018 234 aaKnown RBP3.16□□□□□ -1.9
YML040WYML040W SPO73P40031 143 aa3.16□□□□□ -1.9
YML040WYML040W BMT5P40493 336 aa3.16□□□□□ -1.9
YML040WYML040W YRB2P40517 327 aa3.16□□□□□ -1.9
YML040WYML040W FAR7P43592 221 aa3.16□□□□□ -1.9
YML040WYML040W BXI1P48558 297 aa3.16□□□□□ -1.9
YML040WYML040W GET1P53192 235 aa3.16□□□□□ -1.9
Retrieved 100 of 5,963 RNA–protein pairs in 13.4 ms