RNA–Protein interactions for RNA: YLR115W

CFT2, Transcript of Subunit of the mRNA cleavage and polyadenlylation factor (CPF), yeastyeast

Gene CFT2, Length 2,580 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CFT2YLR115W ECM13P38195 257 aa1.66□□□□□ -2.14
CFT2YLR115W YHR127WP38833 243 aaKnown RBP1.66□□□□□ -2.14
CFT2YLR115W KRE29P40026 464 aa1.66□□□□□ -2.14
CFT2YLR115W PDS1P40316 373 aaPredicted RBP1.66□□□□□ -2.14
CFT2YLR115W YFR057WP43625 151 aa1.66□□□□□ -2.14
CFT2YLR115W AIM23P47015 356 aa1.66□□□□□ -2.14
CFT2YLR115W IRC18P47056 224 aa1.66□□□□□ -2.14
CFT2YLR115W TRM9P49957 279 aa1.66□□□□□ -2.14
CFT2YLR115W PEX31P53203 462 aa1.66□□□□□ -2.14
CFT2YLR115W FRE4P53746 719 aa1.66□□□□□ -2.14
CFT2YLR115W YMD8Q03697 442 aa1.66□□□□□ -2.14
CFT2YLR115W SDH7Q04401 133 aa1.66□□□□□ -2.14
CFT2YLR115W YPR091CQ06833 770 aa1.66□□□□□ -2.14
CFT2YLR115W YDR018CQ12185 396 aa1.66□□□□□ -2.14
CFT2YLR115W YLR126CQ12288 251 aa1.66□□□□□ -2.14
CFT2YLR115W RPN6Q12377 434 aa1.66□□□□□ -2.14
CFT2YLR115W PBI2P0CT04 75 aaKnown RBP1.65□□□□□ -2.14
CFT2YLR115W EPT1P22140 391 aa1.65□□□□□ -2.14
CFT2YLR115W AAT2P23542 418 aaKnown RBP1.65□□□□□ -2.14
CFT2YLR115W RAD5P32849 1169 aaPredicted RBP1.65□□□□□ -2.14
CFT2YLR115W RPS1AP33442 255 aaKnown RBP1.65□□□□□ -2.14
CFT2YLR115W CLG1P35190 452 aa1.65□□□□□ -2.14
CFT2YLR115W MCR1P36060 302 aaKnown RBP1.65□□□□□ -2.14
CFT2YLR115W MRPL3P36516 390 aa1.65□□□□□ -2.14
CFT2YLR115W MRPL39P36533 70 aa1.65□□□□□ -2.14
CFT2YLR115W EFM1P38732 585 aa1.65□□□□□ -2.14
CFT2YLR115W EDC3P39998 551 aaKnown RBP1.65□□□□□ -2.14
CFT2YLR115W FAU1P40099 211 aa1.65□□□□□ -2.14
CFT2YLR115W MOG1P47123 218 aa1.65□□□□□ -2.14
CFT2YLR115W TIM13P53299 105 aa1.65□□□□□ -2.14
CFT2YLR115W MAL13P53338 473 aa1.65□□□□□ -2.14
CFT2YLR115W RCF2P53721 224 aa1.65□□□□□ -2.14
CFT2YLR115W DYN2Q02647 92 aa1.65□□□□□ -2.14
CFT2YLR115W PKR1Q03880 122 aaKnown RBP1.65□□□□□ -2.14
CFT2YLR115W YMR114CQ04471 368 aaKnown RBP1.65□□□□□ -2.14
CFT2YLR115W DYN3Q04949 312 aa1.65□□□□□ -2.14
CFT2YLR115W SUE1Q06524 206 aa1.65□□□□□ -2.14
CFT2YLR115W SME1Q12330 94 aaPredicted RBP1.65□□□□□ -2.14
CFT2YLR115W AGC1Q12482 902 aa1.65□□□□□ -2.14
CFT2YLR115W BI3Q9ZZW7 517 aa1.65□□□□□ -2.14
CFT2YLR115W KIN28P06242 306 aa1.65□□□□□ -2.15
CFT2YLR115W SCO1P23833 295 aa1.65□□□□□ -2.15
CFT2YLR115W CDC50P25656 391 aa1.65□□□□□ -2.15
CFT2YLR115W OCH1P31755 480 aa1.65□□□□□ -2.15
CFT2YLR115W GSP1P32835 219 aaKnown RBP1.65□□□□□ -2.15
CFT2YLR115W GSP2P32836 220 aaKnown RBP1.65□□□□□ -2.15
CFT2YLR115W KTI12P34253 313 aaKnown RBP1.65□□□□□ -2.15
CFT2YLR115W PRY2P36110 329 aa1.65□□□□□ -2.15
CFT2YLR115W YBR241CP38142 488 aa1.65□□□□□ -2.15
CFT2YLR115W OPY1P38271 328 aa1.65□□□□□ -2.15
CFT2YLR115W YBP1P38315 674 aa1.65□□□□□ -2.15
CFT2YLR115W YER076CP40049 302 aa1.65□□□□□ -2.15
CFT2YLR115W GLE2P40066 365 aa1.65□□□□□ -2.15
CFT2YLR115W COG3P40094 801 aa1.65□□□□□ -2.15
CFT2YLR115W PRE5P40302 234 aaKnown RBP1.65□□□□□ -2.15
CFT2YLR115W GDS1P41913 522 aa1.65□□□□□ -2.15
CFT2YLR115W FAR7P43592 221 aa1.65□□□□□ -2.15
CFT2YLR115W JAC1P53193 184 aa1.65□□□□□ -2.15
CFT2YLR115W COG5P53951 403 aa1.65□□□□□ -2.15
CFT2YLR115W ARK1P53974 638 aa1.65□□□□□ -2.15
CFT2YLR115W DID2P69771 204 aa1.65□□□□□ -2.15
CFT2YLR115W TPS1Q00764 495 aaKnown RBP1.65□□□□□ -2.15
CFT2YLR115W YDR278CQ05612 105 aa1.65□□□□□ -2.15
CFT2YLR115W SEI1Q06058 285 aa1.65□□□□□ -2.15
CFT2YLR115W DAS2Q12084 232 aa1.65□□□□□ -2.15
CFT2YLR115W HMS1Q12398 434 aa1.65□□□□□ -2.15
CFT2YLR115W RAX2Q12465 1220 aa1.65□□□□□ -2.15
CFT2YLR115W YIR021W-AQ3E739 70 aa1.65□□□□□ -2.15
CFT2YLR115W YLR361C-AQ3E795 98 aa1.65□□□□□ -2.15
CFT2YLR115W BCY1P07278 416 aaKnown RBP1.64□□□□□ -2.15
CFT2YLR115W RPS24AP0CX31 135 aaKnown RBP1.64□□□□□ -2.15
CFT2YLR115W RPS24BP0CX32 135 aaKnown RBP1.64□□□□□ -2.15
CFT2YLR115W IFM1P25038 676 aa1.64□□□□□ -2.15
CFT2YLR115W TFC1P32367 649 aa1.64□□□□□ -2.15
CFT2YLR115W YKL097CP34245 136 aa1.64□□□□□ -2.15
CFT2YLR115W HEK2P38199 381 aaKnown RBP RIP-Chip data1.64□□□□□ -2.15not detected
CFT2YLR115W GOS1P38736 223 aa1.64□□□□□ -2.15
CFT2YLR115W MTC6P38849 526 aa1.64□□□□□ -2.15
CFT2YLR115W MST28P39552 234 aa1.64□□□□□ -2.15
CFT2YLR115W SMB1P40018 196 aaKnown RBP1.64□□□□□ -2.15
CFT2YLR115W YJR111CP47148 283 aaKnown RBP1.64□□□□□ -2.15
CFT2YLR115W BXI1P48558 297 aa1.64□□□□□ -2.15
CFT2YLR115W YNR066CP53752 436 aa1.64□□□□□ -2.15
CFT2YLR115W TMA20P89886 181 aaPredicted RBP1.64□□□□□ -2.15
CFT2YLR115W IRC15Q02733 499 aa1.64□□□□□ -2.15
CFT2YLR115W CCE1Q03702 353 aa1.64□□□□□ -2.15
CFT2YLR115W TAF9Q05027 157 aa1.64□□□□□ -2.15
CFT2YLR115W DPP1Q05521 289 aa1.64□□□□□ -2.15
CFT2YLR115W SNT309Q06091 175 aaPredicted RBP1.64□□□□□ -2.15
CFT2YLR115W DTD1Q07648 150 aaKnown RBP1.64□□□□□ -2.15
CFT2YLR115W YOL024WQ08172 172 aa1.64□□□□□ -2.15
CFT2YLR115W YOR283WQ12040 230 aaKnown RBP1.64□□□□□ -2.15
CFT2YLR115W ORT1Q12375 292 aa1.64□□□□□ -2.15
CFT2YLR115W YDL085C-AQ3E7B7 68 aaKnown RBP1.64□□□□□ -2.15
CFT2YLR115W SEN1Q00416 2231 aaKnown RBP1.64□□□□□ -2.15
CFT2YLR115W YMR316C-AI2HB70 103 aa1.64□□□□□ -2.15
CFT2YLR115W DSF1P0CX08 502 aa1.64□□□□□ -2.15
CFT2YLR115W YNR073CP0CX09 502 aa1.64□□□□□ -2.15
CFT2YLR115W GCN3P14741 305 aa1.64□□□□□ -2.15
CFT2YLR115W CPR4P25334 318 aa1.64□□□□□ -2.15
Retrieved 100 of 5,963 RNA–protein pairs in 17.1 ms