RNA–Protein interactions for RNA: YGR038C-A

YGR038C-A, Transcript of Retrotransposon TYA Gag gene co-transcribed with TYB Pol, yeastyeast

Gene YGR038C-A, Length 1,323 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YGR038C-AYGR038C-A AGC1Q12482 902 aa3.25□□□□□ -1.89
YGR038C-AYGR038C-A YCL012CQ8J0M4 134 aa3.25□□□□□ -1.89
YGR038C-AYGR038C-A SIR4P11978 1358 aa3.25□□□□□ -1.89
YGR038C-AYGR038C-A CCH1P50077 2039 aa3.25□□□□□ -1.89
YGR038C-AYGR038C-A CHD1P32657 1468 aa3.24□□□□□ -1.89
YGR038C-AYGR038C-A SGA1P08019 549 aa3.24□□□□□ -1.89
YGR038C-AYGR038C-A PEX17P40155 199 aa3.24□□□□□ -1.89
YGR038C-AYGR038C-A RFC4P40339 323 aaKnown RBP3.24□□□□□ -1.89
YGR038C-AYGR038C-A YIL059CP40520 121 aa3.24□□□□□ -1.89
YGR038C-AYGR038C-A PFS2P42841 465 aaKnown RBP3.24□□□□□ -1.89
YGR038C-AYGR038C-A ADO1P47143 340 aaKnown RBP3.24□□□□□ -1.89
YGR038C-AYGR038C-A BRR6P53062 197 aa3.24□□□□□ -1.89
YGR038C-AYGR038C-A RSM10Q03201 203 aa3.24□□□□□ -1.89
YGR038C-AYGR038C-A YLR179CQ06252 201 aaKnown RBP3.24□□□□□ -1.89
YGR038C-AYGR038C-A GEP5Q12393 293 aa3.24□□□□□ -1.89
YGR038C-AYGR038C-A YLR462WO13556 202 aa3.23□□□□□ -1.89
YGR038C-AYGR038C-A URA6P15700 204 aa3.23□□□□□ -1.89
YGR038C-AYGR038C-A SEC22P22214 214 aa3.23□□□□□ -1.89
YGR038C-AYGR038C-A RNP1P32385 249 aa3.23□□□□□ -1.89
YGR038C-AYGR038C-A MGM101P32787 269 aaKnown RBP3.23□□□□□ -1.89
YGR038C-AYGR038C-A SSH1P38353 490 aaKnown RBP3.23□□□□□ -1.89
YGR038C-AYGR038C-A YEL075CP39972 122 aa3.23□□□□□ -1.89
YGR038C-AYGR038C-A SYF2P53277 215 aaPredicted RBP3.23□□□□□ -1.89
YGR038C-AYGR038C-A FYV6P53913 173 aa3.23□□□□□ -1.89
YGR038C-AYGR038C-A YMR226CQ05016 267 aaKnown RBP3.23□□□□□ -1.89
YGR038C-AYGR038C-A ATG38Q05789 226 aaKnown RBP3.23□□□□□ -1.89
YGR038C-AYGR038C-A PST1Q12355 444 aa3.23□□□□□ -1.89
YGR038C-AYGR038C-A JLP1Q12358 412 aa3.23□□□□□ -1.89
YGR038C-AYGR038C-A RPL28P02406 149 aaKnown RBP3.22□□□□□ -1.89
YGR038C-AYGR038C-A MET2P08465 486 aa3.22□□□□□ -1.89
YGR038C-AYGR038C-A RFA3P26755 122 aaKnown RBP3.22□□□□□ -1.89
YGR038C-AYGR038C-A SNZ1Q03148 297 aa3.22□□□□□ -1.89
YGR038C-AYGR038C-A TLG1Q03322 224 aa3.22□□□□□ -1.89
YGR038C-AYGR038C-A YOR268CQ08734 132 aa3.22□□□□□ -1.89
YGR038C-AYGR038C-A MRX4Q12467 430 aa3.22□□□□□ -1.89
YGR038C-AYGR038C-A RAD10P06838 210 aa3.21□□□□□ -1.89
YGR038C-AYGR038C-A YPK2P18961 677 aa3.21□□□□□ -1.89
YGR038C-AYGR038C-A IKI1P38874 309 aa3.21□□□□□ -1.89
YGR038C-AYGR038C-A FAR8Q05040 523 aa3.21□□□□□ -1.89
YGR038C-AYGR038C-A YLR030WQ07967 263 aa3.21□□□□□ -1.89
YGR038C-AYGR038C-A MATALPHA2P0CY08 210 aa3.2□□□□□ -1.9
YGR038C-AYGR038C-A HMLALPHA2P0CY09 210 aa3.2□□□□□ -1.9
YGR038C-AYGR038C-A FMT1P32785 401 aa3.2□□□□□ -1.9
YGR038C-AYGR038C-A YER084WP40057 128 aa3.2□□□□□ -1.9
YGR038C-AYGR038C-A CAT5P41735 233 aa3.2□□□□□ -1.9
YGR038C-AYGR038C-A BUD13P46947 266 aaPredicted RBP3.2□□□□□ -1.9
YGR038C-AYGR038C-A YGL159WP53110 370 aa3.2□□□□□ -1.9
YGR038C-AYGR038C-A GIM3P53900 129 aa3.2□□□□□ -1.9
YGR038C-AYGR038C-A INM2Q05533 292 aa3.2□□□□□ -1.9
YGR038C-AYGR038C-A HEM25Q07534 307 aa3.2□□□□□ -1.9
YGR038C-AYGR038C-A SLD7Q08457 257 aa3.2□□□□□ -1.9
YGR038C-AYGR038C-A ABP140Q08641 628 aaKnown RBP3.2□□□□□ -1.9
YGR038C-AYGR038C-A YRA1Q12159 226 aaKnown RBP3.2□□□□□ -1.9
YGR038C-AYGR038C-A CDC28P00546 298 aaKnown RBP3.19□□□□□ -1.9
YGR038C-AYGR038C-A HTB1P02293 131 aaKnown RBP3.19□□□□□ -1.9
YGR038C-AYGR038C-A HTB2P02294 131 aa3.19□□□□□ -1.9
YGR038C-AYGR038C-A CBF1P17106 351 aa3.19□□□□□ -1.9
YGR038C-AYGR038C-A APA2P22108 325 aa3.19□□□□□ -1.9
YGR038C-AYGR038C-A DBF2P22204 572 aa3.19□□□□□ -1.9
YGR038C-AYGR038C-A ASF2P32448 525 aaPredicted RBP3.19□□□□□ -1.9
YGR038C-AYGR038C-A MSA2P36157 363 aa3.19□□□□□ -1.9
YGR038C-AYGR038C-A RPA43P46669 326 aa3.19□□□□□ -1.9
YGR038C-AYGR038C-A IRC18P47056 224 aa3.19□□□□□ -1.9
YGR038C-AYGR038C-A NOP19P53317 196 aaPredicted RBP3.19□□□□□ -1.9
YGR038C-AYGR038C-A YPR195CQ06594 109 aa3.19□□□□□ -1.9
YGR038C-AYGR038C-A TUS1Q06412 1307 aa3.19□□□□□ -1.9
YGR038C-AYGR038C-A IDH1P28834 360 aaKnown RBP RIP-Chip data3.19□□□□□ -1.9not detected
YGR038C-AYGR038C-A ERG24P32462 438 aaKnown RBP3.19□□□□□ -1.9
YGR038C-AYGR038C-A RCN1P36054 211 aa3.19□□□□□ -1.9
YGR038C-AYGR038C-A PIR5P46999 287 aa3.19□□□□□ -1.9
YGR038C-AYGR038C-A ERV29P53337 310 aa3.19□□□□□ -1.9
YGR038C-AYGR038C-A DID2P69771 204 aa3.19□□□□□ -1.9
YGR038C-AYGR038C-A FEX1Q08913 375 aa3.19□□□□□ -1.9
YGR038C-AYGR038C-A FEX2Q08991 375 aa3.19□□□□□ -1.9
YGR038C-AYGR038C-A QCR7P00128 127 aa3.18□□□□□ -1.9
YGR038C-AYGR038C-A IPP1P00817 287 aaKnown RBP3.18□□□□□ -1.9
YGR038C-AYGR038C-A COS8P38723 381 aa3.18□□□□□ -1.9
YGR038C-AYGR038C-A GTR2P53290 341 aa3.18□□□□□ -1.9
YGR038C-AYGR038C-A CAB4P53332 305 aa3.18□□□□□ -1.9
YGR038C-AYGR038C-A PDR17P53844 350 aa3.18□□□□□ -1.9
YGR038C-AYGR038C-A COX5AP00424 153 aa3.17□□□□□ -1.9
YGR038C-AYGR038C-A KRE1P17260 313 aa3.17□□□□□ -1.9
YGR038C-AYGR038C-A ADE1P27616 306 aa3.17□□□□□ -1.9
YGR038C-AYGR038C-A OAC1P32332 324 aa3.17□□□□□ -1.9
YGR038C-AYGR038C-A RPF1P38805 295 aaKnown RBP3.17□□□□□ -1.9
YGR038C-AYGR038C-A OST2P46964 130 aa3.17□□□□□ -1.9
YGR038C-AYGR038C-A GON7P46984 123 aa3.17□□□□□ -1.9
YGR038C-AYGR038C-A ILM1P47155 203 aa3.17□□□□□ -1.9
YGR038C-AYGR038C-A RMR1P53060 241 aa3.17□□□□□ -1.9
YGR038C-AYGR038C-A NIP7Q08962 181 aaKnown RBP3.17□□□□□ -1.9
YGR038C-AYGR038C-A HTL1Q9URQ5 78 aa3.17□□□□□ -1.9
YGR038C-AYGR038C-A SAC3P46674 1301 aa3.16□□□□□ -1.9
YGR038C-AYGR038C-A DPM1P14020 267 aaKnown RBP3.16□□□□□ -1.9
YGR038C-AYGR038C-A YPT52P36018 234 aaKnown RBP3.16□□□□□ -1.9
YGR038C-AYGR038C-A SPO73P40031 143 aa3.16□□□□□ -1.9
YGR038C-AYGR038C-A BMT5P40493 336 aa3.16□□□□□ -1.9
YGR038C-AYGR038C-A YRB2P40517 327 aa3.16□□□□□ -1.9
YGR038C-AYGR038C-A FAR7P43592 221 aa3.16□□□□□ -1.9
YGR038C-AYGR038C-A BXI1P48558 297 aa3.16□□□□□ -1.9
YGR038C-AYGR038C-A GET1P53192 235 aa3.16□□□□□ -1.9
Retrieved 100 of 5,963 RNA–protein pairs in 55.5 ms