RNA–Protein interactions for RNA: YER012W

PRE1, Transcript of Beta 4 subunit of the 20S proteasome, yeastyeast

Gene PRE1, Length 597 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRE1YER012W UGA1P17649 471 aa2.27□□□□□ -2.05
PRE1YER012W HXT2P23585 541 aa2.27□□□□□ -2.05
PRE1YER012W RPC19P28000 142 aaKnown RBP2.27□□□□□ -2.05
PRE1YER012W FMT1P32785 401 aa2.27□□□□□ -2.05
PRE1YER012W MRPS5P33759 307 aa2.27□□□□□ -2.05
PRE1YER012W ANR2P36090 516 aaPredicted RBP2.27□□□□□ -2.05
PRE1YER012W MRPL27P36526 146 aaPredicted RBP2.27□□□□□ -2.05
PRE1YER012W RCK1P38622 512 aa2.27□□□□□ -2.05
PRE1YER012W RCY1P39531 840 aa2.27□□□□□ -2.05
PRE1YER012W SEN34P39707 275 aa2.27□□□□□ -2.05
PRE1YER012W RFC4P40339 323 aaKnown RBP2.27□□□□□ -2.05
PRE1YER012W MPM1P40364 252 aa2.27□□□□□ -2.05
PRE1YER012W YIL012WP40551 113 aa2.27□□□□□ -2.05
PRE1YER012W APS3P47064 194 aa2.27□□□□□ -2.05
PRE1YER012W ADO1P47143 340 aaKnown RBP2.27□□□□□ -2.05
PRE1YER012W COX20Q04935 205 aa2.27□□□□□ -2.05
PRE1YER012W DCR2Q05924 578 aa2.27□□□□□ -2.05
PRE1YER012W YLR446WQ06204 433 aa2.27□□□□□ -2.05
PRE1YER012W RPN6Q12377 434 aa2.27□□□□□ -2.05
PRE1YER012W EAF3Q12432 401 aa2.27□□□□□ -2.05
PRE1YER012W SPO24Q3E752 67 aa2.27□□□□□ -2.05
PRE1YER012W SAS5Q99314 248 aa2.27□□□□□ -2.05
PRE1YER012W TIM9O74700 87 aa2.26□□□□□ -2.05
PRE1YER012W ERD2P18414 219 aa2.26□□□□□ -2.05
PRE1YER012W ZUO1P32527 433 aaKnown RBP2.26□□□□□ -2.05
PRE1YER012W SUR1P33300 382 aa2.26□□□□□ -2.05
PRE1YER012W YBR063CP38083 404 aa2.26□□□□□ -2.05
PRE1YER012W ECM8P38246 354 aa2.26□□□□□ -2.05
PRE1YER012W ALP1P38971 573 aa2.26□□□□□ -2.05
PRE1YER012W YER184CP39961 794 aa2.26□□□□□ -2.05
PRE1YER012W SOK1P40317 901 aa2.26□□□□□ -2.05
PRE1YER012W MNN5P46982 586 aa2.26□□□□□ -2.05
PRE1YER012W RPS12P48589 143 aaKnown RBP2.26□□□□□ -2.05
PRE1YER012W DBP6P53734 629 aaKnown RBP2.26□□□□□ -2.05
PRE1YER012W TPS1Q00764 495 aaKnown RBP2.26□□□□□ -2.05
PRE1YER012W YMR102CQ03177 834 aa2.26□□□□□ -2.05
PRE1YER012W MCH1Q07376 486 aa2.26□□□□□ -2.05
PRE1YER012W RDL2Q08742 149 aaKnown RBP2.26□□□□□ -2.05
PRE1YER012W YPR202WQ08993 238 aa2.26□□□□□ -2.05
PRE1YER012W DET1Q99288 334 aaKnown RBP2.26□□□□□ -2.05
PRE1YER012W PIS1P06197 220 aaKnown RBP2.25□□□□□ -2.05
PRE1YER012W RPC40P07703 335 aaKnown RBP2.25□□□□□ -2.05
PRE1YER012W YPK2P18961 677 aa2.25□□□□□ -2.05
PRE1YER012W HMX1P32339 317 aa2.25□□□□□ -2.05
PRE1YER012W YOR062CP36025 268 aa2.25□□□□□ -2.05
PRE1YER012W IST2P38250 946 aa2.25□□□□□ -2.05
PRE1YER012W YHR180WP38868 163 aa2.25□□□□□ -2.05
PRE1YER012W RNH202Q05635 350 aa2.25□□□□□ -2.05
PRE1YER012W BUR2Q05949 395 aa2.25□□□□□ -2.05
PRE1YER012W BRX1Q08235 291 aaKnown RBP2.25□□□□□ -2.05
PRE1YER012W HRT1Q08273 121 aa2.25□□□□□ -2.05
PRE1YER012W MCP1Q12106 302 aa2.25□□□□□ -2.05
PRE1YER012W RAX2Q12465 1220 aa2.25□□□□□ -2.05
PRE1YER012W YOR343CQ12484 108 aa2.25□□□□□ -2.05
PRE1YER012W YOS9Q99220 542 aa2.25□□□□□ -2.05
PRE1YER012W YAL064W-BO13512 126 aa2.24□□□□□ -2.05
PRE1YER012W ZRC1P20107 442 aa2.24□□□□□ -2.05
PRE1YER012W FAR1P21268 830 aa2.24□□□□□ -2.05
PRE1YER012W RPS1BP23248 255 aaKnown RBP2.24□□□□□ -2.05
PRE1YER012W PBN1P25580 416 aa2.24□□□□□ -2.05
PRE1YER012W HSP30P25619 332 aa2.24□□□□□ -2.05
PRE1YER012W PPA2P28239 310 aa2.24□□□□□ -2.05
PRE1YER012W EHD3P28817 500 aa2.24□□□□□ -2.05
PRE1YER012W IDH1P28834 360 aaKnown RBP RIP-Chip data2.24□□□□□ -2.05not detected
PRE1YER012W ITR2P30606 609 aa2.24□□□□□ -2.05
PRE1YER012W TIM12P32830 109 aa2.24□□□□□ -2.05
PRE1YER012W VAM7P32912 316 aa2.24□□□□□ -2.05
PRE1YER012W ARC19P33204 171 aaKnown RBP2.24□□□□□ -2.05
PRE1YER012W DTR1P38125 572 aa2.24□□□□□ -2.05
PRE1YER012W TRM5P38793 499 aa2.24□□□□□ -2.05
PRE1YER012W YHR122WP38829 231 aa2.24□□□□□ -2.05
PRE1YER012W FET3P38993 636 aa2.24□□□□□ -2.05
PRE1YER012W MNN9P39107 395 aaKnown RBP2.24□□□□□ -2.05
PRE1YER012W IGD1P43598 195 aa2.24□□□□□ -2.05
PRE1YER012W YHC3P47040 408 aa2.24□□□□□ -2.05
PRE1YER012W BRR6P53062 197 aa2.24□□□□□ -2.05
PRE1YER012W YNL033WP53964 284 aa2.24□□□□□ -2.05
PRE1YER012W YNL019CP53975 284 aa2.24□□□□□ -2.05
PRE1YER012W YDR476CQ03362 224 aa2.24□□□□□ -2.05
PRE1YER012W YDR249CQ03787 373 aa2.24□□□□□ -2.05
PRE1YER012W YDR102CQ03864 110 aa2.24□□□□□ -2.05
PRE1YER012W GRE1Q08969 168 aa2.24□□□□□ -2.05
PRE1YER012W FCY22Q12119 530 aa2.24□□□□□ -2.05
PRE1YER012W HMS1Q12398 434 aa2.24□□□□□ -2.05
PRE1YER012W VPS63O13549 108 aa2.23□□□□□ -2.05
PRE1YER012W RHO1P06780 209 aaKnown RBP2.23□□□□□ -2.05
PRE1YER012W YLL053CP0CD98 152 aa2.23□□□□□ -2.05
PRE1YER012W GAL3P13045 520 aa2.23□□□□□ -2.05
PRE1YER012W DAL80P26343 269 aa2.23□□□□□ -2.05
PRE1YER012W SSE1P32589 693 aaKnown RBP2.23□□□□□ -2.05
PRE1YER012W GDH2P33327 1092 aaKnown RBP2.23□□□□□ -2.05
PRE1YER012W PDX3P38075 228 aaKnown RBP2.23□□□□□ -2.05
PRE1YER012W BIG1P38813 335 aa2.23□□□□□ -2.05
PRE1YER012W KRE29P40026 464 aa2.23□□□□□ -2.05
PRE1YER012W AVT7P40501 490 aa2.23□□□□□ -2.05
PRE1YER012W MAM33P40513 266 aa2.23□□□□□ -2.05
PRE1YER012W YGL114WP53134 725 aa2.23□□□□□ -2.05
PRE1YER012W MPC1P53157 130 aaKnown RBP2.23□□□□□ -2.05
PRE1YER012W YNR062CP53748 327 aa2.23□□□□□ -2.05
PRE1YER012W SED1Q01589 338 aa2.23□□□□□ -2.05
Retrieved 100 of 5,963 RNA–protein pairs in 90.4 ms