RNA–Protein interactions for RNA: YDL147W

RPN5, Transcript of Subunit of the CSN and 26S proteasome lid complexes, yeast

Gene RPN5, Length 1,338 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPN5	YDL147W	URA6	P15700	204 aa		3.93	□□□□□ -1.78
RPN5	YDL147W	CBF1	P17106	351 aa		3.93	□□□□□ -1.78
RPN5	YDL147W	ERD2	P18414	219 aa		3.93	□□□□□ -1.78
RPN5	YDL147W	ADO1	P47143	340 aa	Known RBP	3.93	□□□□□ -1.78
RPN5	YDL147W	BRR6	P53062	197 aa		3.93	□□□□□ -1.78
RPN5	YDL147W	TLG1	Q03322	224 aa		3.93	□□□□□ -1.78
RPN5	YDL147W	YLR179C	Q06252	201 aa	Known RBP	3.93	□□□□□ -1.78
RPN5	YDL147W	TPO4	Q12256	659 aa		3.93	□□□□□ -1.78
RPN5	YDL147W	YJR149W	P47177	404 aa		3.92	□□□□□ -1.78
RPN5	YDL147W	YDR114C	Q04597	100 aa		3.92	□□□□□ -1.78
RPN5	YDL147W	FAB1	P34756	2278 aa		3.92	□□□□□ -1.78
RPN5	YDL147W	YDR157W	A0A023PZE8	133 aa		3.91	□□□□□ -1.78
RPN5	YDL147W	YLR462W	O13556	202 aa		3.91	□□□□□ -1.78
RPN5	YDL147W	HTB1	P02293	131 aa	Known RBP	3.91	□□□□□ -1.78
RPN5	YDL147W	HTB2	P02294	131 aa		3.91	□□□□□ -1.78
RPN5	YDL147W	TOM40	P23644	387 aa	Known RBP	3.91	□□□□□ -1.78
RPN5	YDL147W	MGM101	P32787	269 aa	Known RBP	3.91	□□□□□ -1.78
RPN5	YDL147W	PRY2	P36110	329 aa		3.91	□□□□□ -1.78
RPN5	YDL147W	YEL075C	P39972	122 aa		3.91	□□□□□ -1.78
RPN5	YDL147W	MGA1	P53050	456 aa		3.91	□□□□□ -1.78
RPN5	YDL147W	MDM34	P53083	459 aa		3.91	□□□□□ -1.78
RPN5	YDL147W	YML108W	Q03759	105 aa		3.91	□□□□□ -1.78
RPN5	YDL147W	EMP46	Q12396	444 aa		3.91	□□□□□ -1.78
RPN5	YDL147W	DRS2	P39524	1355 aa		3.9	□□□□□ -1.79
RPN5	YDL147W	COX5A	P00424	153 aa		3.9	□□□□□ -1.79
RPN5	YDL147W	HIS3	P06633	220 aa		3.9	□□□□□ -1.79
RPN5	YDL147W	RPL27A	P0C2H6	136 aa	Known RBP	3.9	□□□□□ -1.79
RPN5	YDL147W	RPL27B	P0C2H7	136 aa	Known RBP	3.9	□□□□□ -1.79
RPN5	YDL147W	SEC22	P22214	214 aa		3.9	□□□□□ -1.79
RPN5	YDL147W	PRX1	P34227	261 aa	Known RBP	3.9	□□□□□ -1.79
RPN5	YDL147W	PFS2	P42841	465 aa	Known RBP	3.9	□□□□□ -1.79
RPN5	YDL147W	HAM1	P47119	197 aa	Known RBP	3.9	□□□□□ -1.79
RPN5	YDL147W	GEP5	Q12393	293 aa		3.9	□□□□□ -1.79
RPN5	YDL147W	COS8	P38723	381 aa		3.89	□□□□□ -1.79
RPN5	YDL147W	IKI1	P38874	309 aa		3.89	□□□□□ -1.79
RPN5	YDL147W	IRC18	P47056	224 aa		3.89	□□□□□ -1.79
RPN5	YDL147W	RMR1	P53060	241 aa		3.89	□□□□□ -1.79
RPN5	YDL147W	FCF1	Q05498	189 aa	Predicted RBP	3.89	□□□□□ -1.79
RPN5	YDL147W	YPR195C	Q06594	109 aa		3.89	□□□□□ -1.79
RPN5	YDL147W	YPL257W	Q08974	193 aa		3.89	□□□□□ -1.79
RPN5	YDL147W	RAD10	P06838	210 aa		3.88	□□□□□ -1.79
RPN5	YDL147W	RPS23A	P0CX29	145 aa	Known RBP	3.88	□□□□□ -1.79
RPN5	YDL147W	RPS23B	P0CX30	145 aa		3.88	□□□□□ -1.79
RPN5	YDL147W	RCN1	P36054	211 aa		3.88	□□□□□ -1.79
RPN5	YDL147W	YGP1	P38616	354 aa	Known RBP	3.88	□□□□□ -1.79
RPN5	YDL147W	CAT5	P41735	233 aa		3.88	□□□□□ -1.79
RPN5	YDL147W	GET1	P53192	235 aa		3.88	□□□□□ -1.79
RPN5	YDL147W	FAR8	Q05040	523 aa		3.88	□□□□□ -1.79
RPN5	YDL147W	YPR172W	Q06608	200 aa		3.88	□□□□□ -1.79
RPN5	YDL147W	NOT5	Q12514	560 aa	Predicted RBP	3.88	□□□□□ -1.79
RPN5	YDL147W	HTL1	Q9URQ5	78 aa		3.88	□□□□□ -1.79
RPN5	YDL147W	YPK2	P18961	677 aa		3.87	□□□□□ -1.79
RPN5	YDL147W	ERG24	P32462	438 aa	Known RBP	3.87	□□□□□ -1.79
RPN5	YDL147W	TAF14	P35189	244 aa		3.87	□□□□□ -1.79
RPN5	YDL147W	BXI1	P48558	297 aa		3.87	□□□□□ -1.79
RPN5	YDL147W	YGL159W	P53110	370 aa		3.87	□□□□□ -1.79
RPN5	YDL147W	TOS8	P53147	276 aa		3.87	□□□□□ -1.79
RPN5	YDL147W	INM2	Q05533	292 aa		3.87	□□□□□ -1.79
RPN5	YDL147W	MSA1	Q08471	629 aa		3.87	□□□□□ -1.79
RPN5	YDL147W	ABP140	Q08641	628 aa	Known RBP	3.87	□□□□□ -1.79
RPN5	YDL147W	BBP1	Q12365	385 aa		3.87	□□□□□ -1.79
RPN5	YDL147W	YDL012C	Q12489	107 aa		3.87	□□□□□ -1.79
RPN5	YDL147W	CHD1	P32657	1468 aa		3.87	□□□□□ -1.79
RPN5	YDL147W	NOP1	P15646	327 aa	Known RBP	3.86	□□□□□ -1.79
RPN5	YDL147W	MSA2	P36157	363 aa		3.86	□□□□□ -1.79
RPN5	YDL147W	YRB2	P40517	327 aa		3.86	□□□□□ -1.79
RPN5	YDL147W	YML096W	Q04489	525 aa		3.86	□□□□□ -1.79
RPN5	YDL147W	CDC28	P00546	298 aa	Known RBP	3.85	□□□□□ -1.79
RPN5	YDL147W	MER1	P16523	270 aa		3.85	□□□□□ -1.79
RPN5	YDL147W	DBF2	P22204	572 aa		3.85	□□□□□ -1.79
RPN5	YDL147W	RFA3	P26755	122 aa	Known RBP	3.85	□□□□□ -1.79
RPN5	YDL147W	PEX17	P40155	199 aa		3.85	□□□□□ -1.79
RPN5	YDL147W	YLR030W	Q07967	263 aa		3.85	□□□□□ -1.79
RPN5	YDL147W	LSO2	Q3E772	92 aa	Known RBP	3.85	□□□□□ -1.79
RPN5	YDL147W	OST2	P46964	130 aa		3.84	□□□□□ -1.79
RPN5	YDL147W	GTR2	P53290	341 aa		3.84	□□□□□ -1.79
RPN5	YDL147W	PDR17	P53844	350 aa		3.84	□□□□□ -1.79
RPN5	YDL147W	ABF2	Q02486	183 aa		3.84	□□□□□ -1.79
RPN5	YDL147W	YMD8	Q03697	442 aa		3.84	□□□□□ -1.79
RPN5	YDL147W	YOR020W-A	Q3E824	90 aa		3.84	□□□□□ -1.79
RPN5	YDL147W	YPL229W	Q99395	206 aa		3.84	□□□□□ -1.79
RPN5	YDL147W	RAD9	P14737	1309 aa		3.83	□□□□□ -1.8
RPN5	YDL147W	ADH3	P07246	375 aa	Known RBP	3.83	□□□□□ -1.8
RPN5	YDL147W	AGA2	P32781	87 aa		3.83	□□□□□ -1.8
RPN5	YDL147W	SRY1	P36007	326 aa		3.83	□□□□□ -1.8
RPN5	YDL147W	GON7	P46984	123 aa		3.83	□□□□□ -1.8
RPN5	YDL147W	YJR141W	P47172	347 aa	Predicted RBP	3.83	□□□□□ -1.8
RPN5	YDL147W	ERV29	P53337	310 aa		3.83	□□□□□ -1.8
RPN5	YDL147W	YDR248C	Q03786	193 aa		3.83	□□□□□ -1.8
RPN5	YDL147W	SGA1	P08019	549 aa		3.82	□□□□□ -1.8
RPN5	YDL147W	MET2	P08465	486 aa		3.82	□□□□□ -1.8
RPN5	YDL147W	GCN3	P14741	305 aa		3.82	□□□□□ -1.8
RPN5	YDL147W	TRM5	P38793	499 aa		3.82	□□□□□ -1.8
RPN5	YDL147W	FIS1	P40515	155 aa		3.82	□□□□□ -1.8
RPN5	YDL147W	TUS1	Q06412	1307 aa		3.81	□□□□□ -1.8
RPN5	YDL147W	DSF1	P0CX08	502 aa		3.81	□□□□□ -1.8
RPN5	YDL147W	YNR073C	P0CX09	502 aa		3.81	□□□□□ -1.8
RPN5	YDL147W	RSA4	P25382	515 aa	Known RBP	3.81	□□□□□ -1.8
RPN5	YDL147W	BMT5	P40493	336 aa		3.81	□□□□□ -1.8
RPN5	YDL147W	FAR7	P43592	221 aa		3.81	□□□□□ -1.8

Retrieved 100 of 5,963 RNA–protein pairs in 22.2 ms