RNA–Protein interactions for RNA: YAR003W

SWD1, Transcript of Subunit of the COMPASS (Set1C) complex, yeastyeast

Gene SWD1, Length 1,281 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWD1YAR003W MSE1P48525 536 aa5.78□□□□□ -1.48
SWD1YAR003W MRX9Q07349 420 aaKnown RBP5.78□□□□□ -1.48
SWD1YAR003W HEM25Q07534 307 aa5.78□□□□□ -1.48
SWD1YAR003W RFU1Q08003 200 aa5.78□□□□□ -1.48
SWD1YAR003W FIT3Q08907 204 aa5.78□□□□□ -1.48
SWD1YAR003W INP53Q12271 1107 aa5.78□□□□□ -1.48
SWD1YAR003W ODC2Q99297 307 aa5.78□□□□□ -1.48
SWD1YAR003W MET3P08536 511 aa5.77□□□□□ -1.49
SWD1YAR003W ARO3P14843 370 aaKnown RBP5.77□□□□□ -1.49
SWD1YAR003W PET18P25362 215 aa5.77□□□□□ -1.49
SWD1YAR003W ARC40P38328 384 aaKnown RBP5.77□□□□□ -1.49
SWD1YAR003W YBR242WP38331 238 aa5.77□□□□□ -1.49
SWD1YAR003W PRS3P38689 320 aaKnown RBP5.77□□□□□ -1.49
SWD1YAR003W YMR144WP40214 342 aaKnown RBP5.77□□□□□ -1.49
SWD1YAR003W ATF1P40353 525 aa5.77□□□□□ -1.49
SWD1YAR003W CAT5P41735 233 aa5.77□□□□□ -1.49
SWD1YAR003W GNA1P43577 159 aaPredicted RBP5.77□□□□□ -1.49
SWD1YAR003W BXI1P48558 297 aa5.77□□□□□ -1.49
SWD1YAR003W UBC13P52490 153 aa5.77□□□□□ -1.49
SWD1YAR003W YGR042WP53227 271 aa5.77□□□□□ -1.49
SWD1YAR003W YDR391CQ04170 232 aa5.77□□□□□ -1.49
SWD1YAR003W UTP15Q04305 513 aaKnown RBP5.77□□□□□ -1.49
SWD1YAR003W YLR031WQ07978 186 aa5.77□□□□□ -1.49
SWD1YAR003W RNH203Q12338 110 aa5.77□□□□□ -1.49
SWD1YAR003W FSH3Q99369 266 aa5.77□□□□□ -1.49
SWD1YAR003W TDH2P00358 332 aaKnown RBP5.76□□□□□ -1.49
SWD1YAR003W CHO1P08456 276 aa5.76□□□□□ -1.49
SWD1YAR003W SPS2P08459 502 aa5.76□□□□□ -1.49
SWD1YAR003W PET54P10834 293 aa5.76□□□□□ -1.49
SWD1YAR003W URA6P15700 204 aa5.76□□□□□ -1.49
SWD1YAR003W CDC23P16522 626 aa5.76□□□□□ -1.49
SWD1YAR003W DBP2P24783 546 aaKnown RBP5.76□□□□□ -1.49
SWD1YAR003W RNP1P32385 249 aa5.76□□□□□ -1.49
SWD1YAR003W YKL107WP34251 309 aa5.76□□□□□ -1.49
SWD1YAR003W MRPL3P36516 390 aa5.76□□□□□ -1.49
SWD1YAR003W TCM62P38228 572 aaKnown RBP5.76□□□□□ -1.49
SWD1YAR003W YHR122WP38829 231 aa5.76□□□□□ -1.49
SWD1YAR003W FLX1P40464 311 aa5.76□□□□□ -1.49
SWD1YAR003W HHT1P61830 136 aa5.76□□□□□ -1.49
SWD1YAR003W YPR098CQ06089 161 aa5.76□□□□□ -1.49
SWD1YAR003W KEI1Q06346 221 aa5.76□□□□□ -1.49
SWD1YAR003W YPR196WQ06595 470 aa5.76□□□□□ -1.49
SWD1YAR003W RRS1Q08746 203 aaKnown RBP5.76□□□□□ -1.49
SWD1YAR003W SCM3Q12334 223 aa5.76□□□□□ -1.49
SWD1YAR003W GCN1P33892 2672 aaKnown RBP5.75□□□□□ -1.49
SWD1YAR003W YKL063CP35725 167 aa5.75□□□□□ -1.49
SWD1YAR003W NAT2P37293 288 aa5.75□□□□□ -1.49
SWD1YAR003W YBR220CP38318 560 aa5.75□□□□□ -1.49
SWD1YAR003W YND1P40009 630 aa5.75□□□□□ -1.49
SWD1YAR003W TOK1P40310 691 aa5.75□□□□□ -1.49
SWD1YAR003W YIL029CP40538 142 aa5.75□□□□□ -1.49
SWD1YAR003W YKE4P40544 346 aa5.75□□□□□ -1.49
SWD1YAR003W BUD8P41698 603 aa5.75□□□□□ -1.49
SWD1YAR003W CIN2P46670 268 aa5.75□□□□□ -1.49
SWD1YAR003W RSM27P53305 110 aa5.75□□□□□ -1.49
SWD1YAR003W YPL077CQ02831 240 aa5.75□□□□□ -1.49
SWD1YAR003W YDC1Q02896 317 aa5.75□□□□□ -1.49
SWD1YAR003W PHO92Q06390 306 aa5.75□□□□□ -1.49
SWD1YAR003W VTS1Q08831 523 aaKnown RBP RIP-Chip data5.75□□□□□ -1.49not detected
SWD1YAR003W RDI1Q12434 202 aa5.75□□□□□ -1.49
SWD1YAR003W ERP4Q12450 207 aa5.75□□□□□ -1.49
SWD1YAR003W RPL25P04456 142 aaKnown RBP5.74□□□□□ -1.49
SWD1YAR003W RPS23AP0CX29 145 aaKnown RBP5.74□□□□□ -1.49
SWD1YAR003W RPS23BP0CX30 145 aa5.74□□□□□ -1.49
SWD1YAR003W GCN3P14741 305 aa5.74□□□□□ -1.49
SWD1YAR003W RNA14P25298 677 aaKnown RBP5.74□□□□□ -1.49
SWD1YAR003W ATG15P25641 520 aa5.74□□□□□ -1.49
SWD1YAR003W VMA5P31412 392 aaKnown RBP5.74□□□□□ -1.49
SWD1YAR003W GLC7P32598 312 aaKnown RBP5.74□□□□□ -1.49
SWD1YAR003W REC114P32841 428 aa5.74□□□□□ -1.49
SWD1YAR003W LSM1P47017 172 aaKnown RBP5.74□□□□□ -1.49
SWD1YAR003W GPG1P53130 126 aa5.74□□□□□ -1.49
SWD1YAR003W NSA1P53136 463 aaPredicted RBP5.74□□□□□ -1.49
SWD1YAR003W FMP48P53233 369 aa5.74□□□□□ -1.49
SWD1YAR003W CRZ1P53968 678 aa5.74□□□□□ -1.49
SWD1YAR003W BUD25P85052 153 aa5.74□□□□□ -1.49
SWD1YAR003W ARG5,6Q01217 863 aa5.74□□□□□ -1.49
SWD1YAR003W YDR248CQ03786 193 aa5.74□□□□□ -1.49
SWD1YAR003W YBR056W-AI2HB52 66 aa5.73□□□□□ -1.49
SWD1YAR003W RPL6BP05739 176 aaKnown RBP5.73□□□□□ -1.49
SWD1YAR003W MSI1P13712 422 aa5.73□□□□□ -1.49
SWD1YAR003W RPI1P23250 407 aaKnown RBP5.73□□□□□ -1.49
SWD1YAR003W MTC7P32633 139 aa5.73□□□□□ -1.49
SWD1YAR003W FAT1P38225 669 aa5.73□□□□□ -1.49
SWD1YAR003W YHL037CP38733 133 aa5.73□□□□□ -1.49
SWD1YAR003W YIL060WP40519 144 aa5.73□□□□□ -1.49
SWD1YAR003W OTU1P43558 301 aa5.73□□□□□ -1.49
SWD1YAR003W PHB2P50085 310 aa5.73□□□□□ -1.49
SWD1YAR003W YIP5P53108 310 aa5.73□□□□□ -1.49
SWD1YAR003W ALG9P53868 555 aaKnown RBP5.73□□□□□ -1.49
SWD1YAR003W MRPL13Q02204 264 aa5.73□□□□□ -1.49
SWD1YAR003W YPL067CQ02754 198 aa5.73□□□□□ -1.49
SWD1YAR003W RXT3Q07458 294 aa5.73□□□□□ -1.49
SWD1YAR003W YOR186WQ08560 144 aa5.73□□□□□ -1.49
SWD1YAR003W EAF3Q12432 401 aa5.73□□□□□ -1.49
SWD1YAR003W SEC16P48415 2195 aaKnown RBP5.72□□□□□ -1.49
SWD1YAR003W CDC28P00546 298 aaKnown RBP5.72□□□□□ -1.49
SWD1YAR003W RAD52P06778 471 aaKnown RBP5.72□□□□□ -1.49
SWD1YAR003W SAG1P20840 650 aa5.72□□□□□ -1.49
SWD1YAR003W YCR101CP25607 182 aa5.72□□□□□ -1.49
Retrieved 100 of 5,963 RNA–protein pairs in 23.6 ms