RNA–Protein interactions for RNA: LSR1

LSR1, Transcript of U2 spliceosomal RNA (U2 snRNA), component of the spliceosome, yeastyeast

Gene LSR1, Length 1,175 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LSR1LSR1 YMR265CQ03508 461 aaKnown RBP7.68□□□□□ -1.18
LSR1LSR1 YML018CQ03730 393 aa7.68□□□□□ -1.18
LSR1LSR1 RRT7Q07829 113 aa7.68□□□□□ -1.18
LSR1LSR1 FRE7Q12333 620 aa7.68□□□□□ -1.18
LSR1LSR1 HMS1Q12398 434 aa7.68□□□□□ -1.18
LSR1LSR1 PRP46Q12417 451 aaPredicted RBP7.68□□□□□ -1.18
LSR1LSR1 GAL1P04385 528 aa7.67□□□□□ -1.18
LSR1LSR1 TY1A-LR4P0C2I8 440 aaKnown RBP7.67□□□□□ -1.18
LSR1LSR1 YML003WP0CF16 290 aa7.67□□□□□ -1.18
LSR1LSR1 TY1A-DR6P0CX70 440 aa7.67□□□□□ -1.18
LSR1LSR1 TY1A-ER1P0CX71 440 aa7.67□□□□□ -1.18
LSR1LSR1 TY1A-LR2P0CX72 440 aa7.67□□□□□ -1.18
LSR1LSR1 TY1A-PLP0CX73 440 aa7.67□□□□□ -1.18
LSR1LSR1 TY1A-JR1P0CX74 440 aa7.67□□□□□ -1.18
LSR1LSR1 TY1A-LR3P0CX75 440 aa7.67□□□□□ -1.18
LSR1LSR1 TY1A-ML2P0CX76 440 aa7.67□□□□□ -1.18
LSR1LSR1 GPI16P38875 610 aa7.67□□□□□ -1.18
LSR1LSR1 SLZ1P40167 298 aa7.67□□□□□ -1.18
LSR1LSR1 YJR115WP47152 169 aa7.67□□□□□ -1.18
LSR1LSR1 YDR248CQ03786 193 aa7.67□□□□□ -1.18
LSR1LSR1 TY1A-GR1Q12085 440 aa7.67□□□□□ -1.18
LSR1LSR1 DGK1Q12382 290 aa7.67□□□□□ -1.18
LSR1LSR1 TY1A-PR3Q6Q5H1 440 aaKnown RBP7.67□□□□□ -1.18
LSR1LSR1 TY1A-OLQ92392 440 aaKnown RBP7.67□□□□□ -1.18
LSR1LSR1 POL2P21951 2222 aaKnown RBP7.67□□□□□ -1.18
LSR1LSR1 GLK1P17709 500 aaKnown RBP7.66□□□□□ -1.18
LSR1LSR1 RFA1P22336 621 aaKnown RBP7.66□□□□□ -1.18
LSR1LSR1 CWP1P28319 239 aa7.66□□□□□ -1.18
LSR1LSR1 MRPL4P36517 319 aa7.66□□□□□ -1.18
LSR1LSR1 SSN8P47821 323 aa7.66□□□□□ -1.18
LSR1LSR1 UFD1P53044 361 aa7.66□□□□□ -1.18
LSR1LSR1 ALG9P53868 555 aaKnown RBP7.66□□□□□ -1.18
LSR1LSR1 CUZ1P53899 274 aa7.66□□□□□ -1.18
LSR1LSR1 RNH201P53942 307 aa7.66□□□□□ -1.18
LSR1LSR1 RTT103Q05543 409 aa7.66□□□□□ -1.18
LSR1LSR1 SRL2Q12020 392 aa7.66□□□□□ -1.18
LSR1LSR1 REX3Q12090 404 aa7.66□□□□□ -1.18
LSR1LSR1 YLR146W-AQ2V2P1 62 aa7.66□□□□□ -1.18
LSR1LSR1 KRR1P25586 316 aaPredicted RBP7.65□□□□□ -1.18
LSR1LSR1 EHD3P28817 500 aa7.65□□□□□ -1.18
LSR1LSR1 SEF1P34228 1148 aa7.65□□□□□ -1.18
LSR1LSR1 ATG8P38182 117 aaRIP-Chip data7.65□□□□□ -1.18not detected
LSR1LSR1 SPC25P40014 221 aa7.65□□□□□ -1.18
LSR1LSR1 LTP1P40347 161 aa7.65□□□□□ -1.18
LSR1LSR1 YPS6P40583 537 aa7.65□□□□□ -1.18
LSR1LSR1 NSE4P43124 402 aa7.65□□□□□ -1.18
LSR1LSR1 TRM9P49957 279 aa7.65□□□□□ -1.18
LSR1LSR1 TIM21P53220 239 aa7.65□□□□□ -1.18
LSR1LSR1 YGR126WP53274 230 aa7.65□□□□□ -1.18
LSR1LSR1 SNO1Q03144 224 aa7.65□□□□□ -1.18
LSR1LSR1 HAS1Q03532 505 aaKnown RBP7.65□□□□□ -1.18
LSR1LSR1 CAB5Q03941 241 aa7.65□□□□□ -1.18
LSR1LSR1 DIC1Q06143 298 aa7.65□□□□□ -1.18
LSR1LSR1 SCP1Q08873 200 aa7.65□□□□□ -1.18
LSR1LSR1 PRS5Q12265 496 aaKnown RBP7.65□□□□□ -1.18
LSR1LSR1 YIL046W-AQ3E7Z4 54 aa7.65□□□□□ -1.18
LSR1LSR1 SCEIP03882 235 aa7.64□□□□□ -1.19
LSR1LSR1 SEC59P20048 519 aa7.64□□□□□ -1.19
LSR1LSR1 MIR1P23641 311 aaKnown RBP7.64□□□□□ -1.19
LSR1LSR1 PCL1P24867 279 aa7.64□□□□□ -1.19
LSR1LSR1 ERG3P32353 365 aa7.64□□□□□ -1.19
LSR1LSR1 MKK2P32491 506 aa7.64□□□□□ -1.19
LSR1LSR1 SOL1P50278 321 aa7.64□□□□□ -1.19
LSR1LSR1 GPI15P53961 229 aa7.64□□□□□ -1.19
LSR1LSR1 MRPS17Q03246 237 aaPredicted RBP7.64□□□□□ -1.19
LSR1LSR1 TGS1Q12052 315 aa7.64□□□□□ -1.19
LSR1LSR1 VAM3Q12241 283 aa7.64□□□□□ -1.19
LSR1LSR1 ERP4Q12450 207 aa7.64□□□□□ -1.19
LSR1LSR1 PAR32Q12515 295 aaKnown RBP7.64□□□□□ -1.19
LSR1LSR1 MSW1P04803 379 aa7.63□□□□□ -1.19
LSR1LSR1 QCR2P07257 368 aa7.63□□□□□ -1.19
LSR1LSR1 ADO1P47143 340 aaKnown RBP7.63□□□□□ -1.19
LSR1LSR1 LCL3P53153 274 aa7.63□□□□□ -1.19
LSR1LSR1 THI74Q04083 370 aa7.63□□□□□ -1.19
LSR1LSR1 CRR1Q05790 422 aa7.63□□□□□ -1.19
LSR1LSR1 YDL086WQ07505 273 aa7.63□□□□□ -1.19
LSR1LSR1 ISA2Q12425 185 aa7.63□□□□□ -1.19
LSR1LSR1 YPR145C-AQ2V2P0 78 aa7.63□□□□□ -1.19
LSR1LSR1 GLT1Q12680 2145 aaKnown RBP7.63□□□□□ -1.19
LSR1LSR1 ADH3P07246 375 aaKnown RBP7.62□□□□□ -1.19
LSR1LSR1 RFA3P26755 122 aaKnown RBP7.62□□□□□ -1.19
LSR1LSR1 AFG1P32317 509 aa7.62□□□□□ -1.19
LSR1LSR1 YPT31P38555 223 aaKnown RBP7.62□□□□□ -1.19
LSR1LSR1 ASK10P48361 1146 aa7.62□□□□□ -1.19
LSR1LSR1 PKP2P53170 491 aa7.62□□□□□ -1.19
LSR1LSR1 RSM10Q03201 203 aa7.62□□□□□ -1.19
LSR1LSR1 YDR102CQ03864 110 aa7.62□□□□□ -1.19
LSR1LSR1 CTS2Q06350 511 aa7.62□□□□□ -1.19
LSR1LSR1 HNT3Q08702 217 aa7.62□□□□□ -1.19
LSR1LSR1 RDL2Q08742 149 aaKnown RBP7.62□□□□□ -1.19
LSR1LSR1 MED4Q12343 284 aa7.62□□□□□ -1.19
LSR1LSR1 SWM1Q12379 170 aa7.62□□□□□ -1.19
LSR1LSR1 MES1P00958 751 aaKnown RBP7.61□□□□□ -1.19
LSR1LSR1 FRS1P15624 595 aaKnown RBP7.61□□□□□ -1.19
LSR1LSR1 MRS4P23500 304 aa7.61□□□□□ -1.19
LSR1LSR1 RIB5P38145 238 aa7.61□□□□□ -1.19
LSR1LSR1 AVT5P38176 459 aa7.61□□□□□ -1.19
LSR1LSR1 APD1P38281 316 aa7.61□□□□□ -1.19
LSR1LSR1 YEA6P39953 335 aa7.61□□□□□ -1.19
LSR1LSR1 GWT1P47026 490 aa7.61□□□□□ -1.19
Retrieved 100 of 5,963 RNA–protein pairs in 19.6 ms