RNA–Protein interactions for RNA: ENST00000641491.1

PHGDH-218, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 986 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-218ENST00000641491 ZC3H3Q8IXZ2 948 aaKnown RBP14.02□□□□□ -0.17
PHGDH-218ENST00000641491 LRRC43Q8N309 656 aa14.02□□□□□ -0.17
PHGDH-218ENST00000641491 SMG8Q8ND04 991 aaKnown RBP14.02□□□□□ -0.17
PHGDH-218ENST00000641491 HELQQ8TDG4 1101 aa14.02□□□□□ -0.17
PHGDH-218ENST00000641491 FBXL18Q96ME1 805 aa14.02□□□□□ -0.17
PHGDH-218ENST00000641491 PDE11AQ9HCR9 933 aa14.02□□□□□ -0.17
PHGDH-218ENST00000641491 TAB2Q9NYJ8 693 aa14.02□□□□□ -0.17
PHGDH-218ENST00000641491 UBQLN1Q9UMX0 589 aaKnown RBP14.02□□□□□ -0.17
PHGDH-218ENST00000641491 C2CD2Q9Y426 696 aa14.02□□□□□ -0.17
PHGDH-218ENST00000641491 SIP14410 1827 aa14.01□□□□□ -0.17
PHGDH-218ENST00000641491 ARL5CA6NH57 179 aa14.01□□□□□ -0.17
PHGDH-218ENST00000641491 LACTBL1A8MY62 500 aa14.01□□□□□ -0.17
PHGDH-218ENST00000641491 ABLIM1O14639 778 aa14.01□□□□□ -0.17
PHGDH-218ENST00000641491 ADRB2P07550 413 aa14.01□□□□□ -0.17
PHGDH-218ENST00000641491 TPM1P09493 284 aa14.01□□□□□ -0.17
PHGDH-218ENST00000641491 TRIM49P0CI25 452 aa14.01□□□□□ -0.17
PHGDH-218ENST00000641491 TRIM49CP0CI26 452 aa14.01□□□□□ -0.17
PHGDH-218ENST00000641491 ATP2A2P16615 1042 aaKnown RBP14.01□□□□□ -0.17
PHGDH-218ENST00000641491 GTF2H1P32780 548 aa14.01□□□□□ -0.17
PHGDH-218ENST00000641491 UVSSAQ2YD98 709 aa14.01□□□□□ -0.17
PHGDH-218ENST00000641491 WDR44Q5JSH3 913 aa14.01□□□□□ -0.17
PHGDH-218ENST00000641491 GLRA4Q5JXX5 417 aa14.01□□□□□ -0.17
PHGDH-218ENST00000641491 KRT39Q6A163 491 aa14.01□□□□□ -0.17
PHGDH-218ENST00000641491 JADE1Q6IE81 842 aa14.01□□□□□ -0.17
PHGDH-218ENST00000641491 HERVK_113Q902F9 699 aa14.01□□□□□ -0.17
PHGDH-218ENST00000641491 MFSD14AQ96MC6 490 aa14.01□□□□□ -0.17
PHGDH-218ENST00000641491 ZNF560Q96MR9 790 aa14.01□□□□□ -0.17
PHGDH-218ENST00000641491 GAD1Q99259 594 aa14.01□□□□□ -0.17
PHGDH-218ENST00000641491 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.01□□□□□ -0.17
PHGDH-218ENST00000641491 OSBPL7Q9BZF2 842 aa14.01□□□□□ -0.17
PHGDH-218ENST00000641491 TRIM5Q9C035 493 aa14.01□□□□□ -0.17
PHGDH-218ENST00000641491 HAPLN2Q9GZV7 340 aa14.01□□□□□ -0.17
PHGDH-218ENST00000641491 TMEM117Q9H0C3 514 aa14.01□□□□□ -0.17
PHGDH-218ENST00000641491 CNTN3Q9P232 1028 aa14.01□□□□□ -0.17
PHGDH-218ENST00000641491 LRRIQ3A6PVS8 624 aaPredicted RBP14□□□□□ -0.17
PHGDH-218ENST00000641491 POMCP01189 267 aa14□□□□□ -0.17
PHGDH-218ENST00000641491 FGFR1P11362 822 aa14□□□□□ -0.17
PHGDH-218ENST00000641491 P4HA1P13674 534 aa14□□□□□ -0.17
PHGDH-218ENST00000641491 TRIM21P19474 475 aaKnown RBP14□□□□□ -0.17
PHGDH-218ENST00000641491 SCNN1GP51170 649 aa14□□□□□ -0.17
PHGDH-218ENST00000641491 MARSP56192 900 aaKnown RBP14□□□□□ -0.17
PHGDH-218ENST00000641491 UBASH3AP57075 661 aa14□□□□□ -0.17
PHGDH-218ENST00000641491 FAM189BP81408 668 aa14□□□□□ -0.17
PHGDH-218ENST00000641491 UBXN1Q04323 297 aa14□□□□□ -0.17
PHGDH-218ENST00000641491 MYO1EQ12965 1108 aa14□□□□□ -0.17
PHGDH-218ENST00000641491 BTG3Q14201 252 aaPredicted RBP14□□□□□ -0.17
PHGDH-218ENST00000641491 KRT31Q15323 416 aa14□□□□□ -0.17
PHGDH-218ENST00000641491 VWA3BQ502W6 1294 aa14□□□□□ -0.17
PHGDH-218ENST00000641491 PAN2Q504Q3 1202 aaKnown RBP14□□□□□ -0.17
PHGDH-218ENST00000641491 TMEM240Q5SV17 173 aa14□□□□□ -0.17
PHGDH-218ENST00000641491 CDKAL1Q5VV42 579 aa14□□□□□ -0.17
PHGDH-218ENST00000641491 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14□□□□□ -0.17
PHGDH-218ENST00000641491 TMEM192Q8IY95 271 aa14□□□□□ -0.17
PHGDH-218ENST00000641491 PHOSPHO2Q8TCD6 241 aa14□□□□□ -0.17
PHGDH-218ENST00000641491 LINC01599Q8WXQ3 324 aa14□□□□□ -0.17
PHGDH-218ENST00000641491 UROC1Q96N76 676 aa14□□□□□ -0.17
PHGDH-218ENST00000641491 DNAI2Q9GZS0 605 aa14□□□□□ -0.17
PHGDH-218ENST00000641491 RBSNQ9H1K0 784 aa14□□□□□ -0.17
PHGDH-218ENST00000641491 VPS16Q9H269 839 aa14□□□□□ -0.17
PHGDH-218ENST00000641491 TMEM8AQ9HCN3 771 aa14□□□□□ -0.17
PHGDH-218ENST00000641491 AAASQ9NRG9 546 aa14□□□□□ -0.17
PHGDH-218ENST00000641491 ITGA11Q9UKX5 1188 aa14□□□□□ -0.17
PHGDH-218ENST00000641491 TTC28Q96AY4 2481 aa14□□□□□ -0.17
PHGDH-218ENST00000641491 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.99□□□□□ -0.17
PHGDH-218ENST00000641491 TTC26A0AVF1 554 aa13.99□□□□□ -0.17
PHGDH-218ENST00000641491 ARHGEF37A1IGU5 675 aa13.99□□□□□ -0.17
PHGDH-218ENST00000641491 TLL1O43897 1013 aa13.99□□□□□ -0.17
PHGDH-218ENST00000641491 NFICP08651 508 aa13.99□□□□□ -0.17
PHGDH-218ENST00000641491 GCLMP48507 274 aa13.99□□□□□ -0.17
PHGDH-218ENST00000641491 COPB1P53618 953 aaKnown RBP13.99□□□□□ -0.17
PHGDH-218ENST00000641491 FANCCQ00597 558 aa13.99□□□□□ -0.17
PHGDH-218ENST00000641491 KCNH2Q12809 1159 aa13.99□□□□□ -0.17
PHGDH-218ENST00000641491 GPNMBQ14956 572 aa13.99□□□□□ -0.17
PHGDH-218ENST00000641491 NCAPHQ15003 741 aa13.99□□□□□ -0.17
PHGDH-218ENST00000641491 SLC10A6Q3KNW5 377 aa13.99□□□□□ -0.17
PHGDH-218ENST00000641491 LMBRD2Q68DH5 695 aaPredicted RBP13.99□□□□□ -0.17
PHGDH-218ENST00000641491 CRELD2Q6UXH1 353 aaPredicted RBP13.99□□□□□ -0.17
PHGDH-218ENST00000641491 GBP6Q6ZN66 633 aa13.99□□□□□ -0.17
PHGDH-218ENST00000641491 AGMOQ6ZNB7 445 aa13.99□□□□□ -0.17
PHGDH-218ENST00000641491 TRIM59Q8IWR1 403 aa13.99□□□□□ -0.17
PHGDH-218ENST00000641491 DRC7Q8IY82 874 aa13.99□□□□□ -0.17
PHGDH-218ENST00000641491 PARD3BQ8TEW8 1205 aa13.99□□□□□ -0.17
PHGDH-218ENST00000641491 TOP1MTQ969P6 601 aa13.99□□□□□ -0.17
PHGDH-218ENST00000641491 ZFP42Q96MM3 310 aa13.99□□□□□ -0.17
PHGDH-218ENST00000641491 MTMR12Q9C0I1 747 aa13.99□□□□□ -0.17
PHGDH-218ENST00000641491 RNF39Q9H2S5 420 aa13.99□□□□□ -0.17
PHGDH-218ENST00000641491 NDST4Q9H3R1 872 aa13.99□□□□□ -0.17
PHGDH-218ENST00000641491 LIMA1Q9UHB6 759 aaKnown RBP13.99□□□□□ -0.17
PHGDH-218ENST00000641491 NUB1Q9Y5A7 615 aa13.99□□□□□ -0.17
PHGDH-218ENST00000641491 SMIM28A0A1B0GU29 152 aa13.98□□□□□ -0.17
PHGDH-218ENST00000641491 P4HA2O15460 535 aa13.98□□□□□ -0.17
PHGDH-218ENST00000641491 FAM189A1O60320 539 aa13.98□□□□□ -0.17
PHGDH-218ENST00000641491 ZC3H11AO75152 810 aaKnown RBP eCLIP13.98□□□□□ -0.17
PHGDH-218ENST00000641491 KCNE1P15382 129 aa13.98□□□□□ -0.17
PHGDH-218ENST00000641491 CYP3A5P20815 502 aa13.98□□□□□ -0.17
PHGDH-218ENST00000641491 PNPLA4P41247 253 aa13.98□□□□□ -0.17
PHGDH-218ENST00000641491 DEFB103AP81534 67 aa13.98□□□□□ -0.17
PHGDH-218ENST00000641491 RBP5P82980 135 aa13.98□□□□□ -0.17
PHGDH-218ENST00000641491 GSE1Q14687 1217 aa13.98□□□□□ -0.17
PHGDH-218ENST00000641491 ZNF598Q86UK7 904 aaKnown RBP13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms