RNA–Protein interactions for RNA: ENST00000641259.1

RBFOX1-224, Transcript of RNA binding fox-1 homolog 1, humanhuman

BASIC

Gene RBFOX1, Length 3,651 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-224ENST00000641259 CAPN15O75808 1086 aa12.61□□□□□ -0.39
RBFOX1-224ENST00000641259 ATP6V1C1P21283 382 aa12.61□□□□□ -0.39
RBFOX1-224ENST00000641259 USP11P51784 963 aa12.61□□□□□ -0.39
RBFOX1-224ENST00000641259 TRIM50Q86XT4 487 aa12.61□□□□□ -0.39
RBFOX1-224ENST00000641259 ADSSL1Q8N142 457 aa12.61□□□□□ -0.39
RBFOX1-224ENST00000641259 SYT17Q9BSW7 474 aa12.61□□□□□ -0.39
RBFOX1-224ENST00000641259 WDR18Q9BV38 432 aa12.61□□□□□ -0.39
RBFOX1-224ENST00000641259 KIAA1683Q9H0B3 1180 aa12.61□□□□□ -0.39
RBFOX1-224ENST00000641259 ARMCX3Q9UH62 379 aaPredicted RBP12.61□□□□□ -0.39
RBFOX1-224ENST00000641259 FEM1BQ9UK73 627 aa12.61□□□□□ -0.39
RBFOX1-224ENST00000641259 PCDHA12Q9UN75 941 aa12.61□□□□□ -0.39
RBFOX1-224ENST00000641259 MYMKA6NI61 221 aa12.6□□□□□ -0.39
RBFOX1-224ENST00000641259 LSM1O15116 133 aaKnown RBP12.6□□□□□ -0.39
RBFOX1-224ENST00000641259 TSPY1Q01534 308 aa12.6□□□□□ -0.39
RBFOX1-224ENST00000641259 SPP2Q13103 211 aa12.6□□□□□ -0.39
RBFOX1-224ENST00000641259 TMEM119Q4V9L6 283 aa12.6□□□□□ -0.39
RBFOX1-224ENST00000641259 CALML4Q96GE6 196 aa12.6□□□□□ -0.39
RBFOX1-224ENST00000641259 PYM1Q9BRP8 204 aaKnown RBP12.6□□□□□ -0.39
RBFOX1-224ENST00000641259 ARHGEF38Q9NXL2 777 aa12.6□□□□□ -0.39
RBFOX1-224ENST00000641259 BLOC1S6Q9UL45 172 aa12.6□□□□□ -0.39
RBFOX1-224ENST00000641259 DOLKQ9UPQ8 538 aa12.6□□□□□ -0.39
RBFOX1-224ENST00000641259 COL11A1P12107 1806 aaPredicted RBP12.6□□□□□ -0.39
RBFOX1-224ENST00000641259 IGLV3-22A0A075B6J6 115 aa12.6□□□□□ -0.39
RBFOX1-224ENST00000641259 PLA2G6O60733 806 aa12.6□□□□□ -0.39
RBFOX1-224ENST00000641259 THOC5Q13769 683 aaKnown RBP12.6□□□□□ -0.39
RBFOX1-224ENST00000641259 PDIA5Q14554 519 aa12.6□□□□□ -0.39
RBFOX1-224ENST00000641259 ITIH4Q14624 930 aa12.6□□□□□ -0.39
RBFOX1-224ENST00000641259 EXOC3L4Q17RC7 722 aa12.6□□□□□ -0.39
RBFOX1-224ENST00000641259 C6orf118Q5T5N4 469 aa12.6□□□□□ -0.39
RBFOX1-224ENST00000641259 TMEM110Q86TL2 294 aa12.6□□□□□ -0.39
RBFOX1-224ENST00000641259 CHURC1Q8WUH1 139 aa12.6□□□□□ -0.39
RBFOX1-224ENST00000641259 CCDC124Q96CT7 223 aaKnown RBP12.6□□□□□ -0.39
RBFOX1-224ENST00000641259 MYLK2Q9H1R3 596 aa12.6□□□□□ -0.39
RBFOX1-224ENST00000641259 UBN1Q9NPG3 1134 aa12.6□□□□□ -0.39
RBFOX1-224ENST00000641259 ZNF112Q9UJU3 913 aa12.6□□□□□ -0.39
RBFOX1-224ENST00000641259 ZNF180Q9UJW8 692 aa12.6□□□□□ -0.39
RBFOX1-224ENST00000641259 A0A1W2PQC6 194 aa12.6□□□□□ -0.39
RBFOX1-224ENST00000641259 PTPRAP18433 802 aa12.6□□□□□ -0.39
RBFOX1-224ENST00000641259 CCNE1P24864 410 aa12.6□□□□□ -0.39
RBFOX1-224ENST00000641259 CETN2P41208 172 aa12.6□□□□□ -0.39
RBFOX1-224ENST00000641259 TMEM266Q2M3C6 531 aa12.6□□□□□ -0.39
RBFOX1-224ENST00000641259 GLIS3Q8NEA6 775 aa12.6□□□□□ -0.39
RBFOX1-224ENST00000641259 PLVAPQ9BX97 442 aa12.6□□□□□ -0.39
RBFOX1-224ENST00000641259 SMYD3Q9H7B4 428 aa12.6□□□□□ -0.39
RBFOX1-224ENST00000641259 NPHS2Q9NP85 383 aa12.6□□□□□ -0.39
RBFOX1-224ENST00000641259 ANLNQ9NQW6 1124 aa12.6□□□□□ -0.39
RBFOX1-224ENST00000641259 ZFP69BQ9UJL9 534 aa12.6□□□□□ -0.39
RBFOX1-224ENST00000641259 GGA2Q9UJY4 613 aa12.6□□□□□ -0.39
RBFOX1-224ENST00000641259 WDR90Q96KV7 1748 aa12.6□□□□□ -0.39
RBFOX1-224ENST00000641259 PAPPA2Q9BXP8 1791 aa12.6□□□□□ -0.39
RBFOX1-224ENST00000641259 OTOFQ9HC10 1997 aa12.59□□□□□ -0.39
RBFOX1-224ENST00000641259 POTEB3A0JP26 581 aa12.59□□□□□ -0.39
RBFOX1-224ENST00000641259 POTECB2RU33 542 aa12.59□□□□□ -0.39
RBFOX1-224ENST00000641259 MSH4O15457 936 aa12.59□□□□□ -0.39
RBFOX1-224ENST00000641259 MED24O75448 989 aa12.59□□□□□ -0.39
RBFOX1-224ENST00000641259 ACTN1P12814 892 aa12.59□□□□□ -0.39
RBFOX1-224ENST00000641259 VHLP40337 213 aa12.59□□□□□ -0.39
RBFOX1-224ENST00000641259 GRAMD1BQ3KR37 738 aa12.59□□□□□ -0.39
RBFOX1-224ENST00000641259 ALKBH5Q6P6C2 394 aaKnown RBP12.59□□□□□ -0.39
RBFOX1-224ENST00000641259 POTEBQ6S5H4 581 aa12.59□□□□□ -0.39
RBFOX1-224ENST00000641259 MTHFD1LQ6UB35 978 aa12.59□□□□□ -0.39
RBFOX1-224ENST00000641259 NCAPG2Q86XI2 1143 aa12.59□□□□□ -0.39
RBFOX1-224ENST00000641259 ST13P4Q8IZP2 240 aaPredicted RBP12.59□□□□□ -0.39
RBFOX1-224ENST00000641259 CLEC4DQ8WXI8 215 aa12.59□□□□□ -0.39
RBFOX1-224ENST00000641259 IQCGQ9H095 443 aaKnown RBP12.59□□□□□ -0.39
RBFOX1-224ENST00000641259 RNF14Q9UBS8 474 aa12.59□□□□□ -0.39
RBFOX1-224ENST00000641259 RHOBTB3O94955 611 aa12.59□□□□□ -0.39
RBFOX1-224ENST00000641259 EIF3BP55884 814 aaKnown RBP12.59□□□□□ -0.39
RBFOX1-224ENST00000641259 ARHGAP44Q17R89 818 aa12.59□□□□□ -0.39
RBFOX1-224ENST00000641259 ZCWPW2Q504Y3 356 aa12.59□□□□□ -0.39
RBFOX1-224ENST00000641259 CCDC92Q53HC0 331 aaPredicted RBP12.59□□□□□ -0.39
RBFOX1-224ENST00000641259 CCDC62Q6P9F0 684 aa12.59□□□□□ -0.39
RBFOX1-224ENST00000641259 CPXCR1Q8N123 301 aa12.59□□□□□ -0.39
RBFOX1-224ENST00000641259 PURBQ96QR8 312 aaKnown RBP12.59□□□□□ -0.39
RBFOX1-224ENST00000641259 TCHPQ9BT92 498 aa12.59□□□□□ -0.39
RBFOX1-224ENST00000641259 TBC1D10AQ9BXI6 508 aa12.59□□□□□ -0.39
RBFOX1-224ENST00000641259 GLT8D2Q9H1C3 349 aa12.59□□□□□ -0.39
RBFOX1-224ENST00000641259 RPAP3Q9H6T3 665 aaPredicted RBP12.59□□□□□ -0.39
RBFOX1-224ENST00000641259 RAVER2Q9HCJ3 691 aaKnown RBP12.59□□□□□ -0.39
RBFOX1-224ENST00000641259 HOMER2Q9NSB8 354 aa12.59□□□□□ -0.39
RBFOX1-224ENST00000641259 UBAP1Q9NZ09 502 aa12.59□□□□□ -0.39
RBFOX1-224ENST00000641259 RNF181Q9P0P0 153 aa12.59□□□□□ -0.39
RBFOX1-224ENST00000641259 PLAGL2Q9UPG8 496 aa12.59□□□□□ -0.39
RBFOX1-224ENST00000641259 TSC22D4Q9Y3Q8 395 aa12.59□□□□□ -0.39
RBFOX1-224ENST00000641259 PDXDC1Q6P996 788 aa12.59□□□□□ -0.39
RBFOX1-224ENST00000641259 IZUMO2Q6UXV1 221 aa12.59□□□□□ -0.39
RBFOX1-224ENST00000641259 FAM160B2Q86V87 743 aa12.59□□□□□ -0.39
RBFOX1-224ENST00000641259 C4orf33Q8N1A6 199 aa12.59□□□□□ -0.39
RBFOX1-224ENST00000641259 KIAA0895Q8NCT3 520 aa12.59□□□□□ -0.39
RBFOX1-224ENST00000641259 FAM13CQ8NE31 585 aa12.59□□□□□ -0.39
RBFOX1-224ENST00000641259 SPOCK2Q92563 424 aa12.59□□□□□ -0.39
RBFOX1-224ENST00000641259 LARP4BQ92615 738 aaKnown RBP12.59□□□□□ -0.39
RBFOX1-224ENST00000641259 RAD54LQ92698 747 aa12.59□□□□□ -0.39
RBFOX1-224ENST00000641259 DTNBP1Q96EV8 351 aa12.59□□□□□ -0.39
RBFOX1-224ENST00000641259 C7orf25Q9BPX7 421 aa12.59□□□□□ -0.39
RBFOX1-224ENST00000641259 SLC12A4Q9UP95 1085 aa12.59□□□□□ -0.39
RBFOX1-224ENST00000641259 E9PMD0 336 aa12.58□□□□□ -0.4
RBFOX1-224ENST00000641259 WDR46O15213 610 aaKnown RBP12.58□□□□□ -0.4
RBFOX1-224ENST00000641259 MAPK13O15264 365 aa12.58□□□□□ -0.4
RBFOX1-224ENST00000641259 SERPINB6P35237 376 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms