RNA–Protein interactions for RNA: ENST00000638889.1

CCDC7-211, Transcript of coiled-coil domain containing 7, humanhuman

TSL 3

Gene CCDC7, Length 423 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-211ENST00000638889 CLRN3Q8NCR9 226 aa4.97□□□□□ -1.61
CCDC7-211ENST00000638889 AUTS2Q8WXX7 1259 aa4.97□□□□□ -1.61
CCDC7-211ENST00000638889 RNF31Q96EP0 1072 aa4.97□□□□□ -1.61
CCDC7-211ENST00000638889 TTC1Q99614 292 aa4.97□□□□□ -1.61
CCDC7-211ENST00000638889 GREM2Q9H772 168 aa4.97□□□□□ -1.61
CCDC7-211ENST00000638889 KIAA1586Q9HCI6 787 aa4.97□□□□□ -1.61
CCDC7-211ENST00000638889 RBM12Q9NTZ6 932 aaKnown RBP4.97□□□□□ -1.61
CCDC7-211ENST00000638889 FOXJ2Q9P0K8 574 aa4.97□□□□□ -1.61
CCDC7-211ENST00000638889 LRIT1Q9P2V4 623 aa4.97□□□□□ -1.61
CCDC7-211ENST00000638889 DMTF1Q9Y222 760 aa4.97□□□□□ -1.61
CCDC7-211ENST00000638889 FRMD4BQ9Y2L6 1034 aa4.97□□□□□ -1.61
CCDC7-211ENST00000638889 PROP1O75360 226 aa4.96□□□□□ -1.62
CCDC7-211ENST00000638889 GPANK1O95872 356 aa4.96□□□□□ -1.62
CCDC7-211ENST00000638889 ATP5JP18859 108 aa4.96□□□□□ -1.62
CCDC7-211ENST00000638889 FGFR4P22455 802 aa4.96□□□□□ -1.62
CCDC7-211ENST00000638889 GUCY1A2P33402 732 aa4.96□□□□□ -1.62
CCDC7-211ENST00000638889 PER3P56645 1201 aa4.96□□□□□ -1.62
CCDC7-211ENST00000638889 MUM1Q2TAK8 710 aa4.96□□□□□ -1.62
CCDC7-211ENST00000638889 MUM1L1Q5H9M0 696 aa4.96□□□□□ -1.62
CCDC7-211ENST00000638889 FOXR2Q6PJQ5 311 aa4.96□□□□□ -1.62
CCDC7-211ENST00000638889 THNSL2Q86YJ6 484 aa4.96□□□□□ -1.62
CCDC7-211ENST00000638889 TSPEARQ8WU66 669 aa4.96□□□□□ -1.62
CCDC7-211ENST00000638889 CASKIN2Q8WXE0 1202 aa4.96□□□□□ -1.62
CCDC7-211ENST00000638889 PDLIM2Q96JY6 352 aa4.96□□□□□ -1.62
CCDC7-211ENST00000638889 UHRF1Q96T88 793 aaPredicted RBP4.96□□□□□ -1.62
CCDC7-211ENST00000638889 ZSWIM1Q9BR11 485 aa4.96□□□□□ -1.62
CCDC7-211ENST00000638889 CASS4Q9NQ75 786 aa4.96□□□□□ -1.62
CCDC7-211ENST00000638889 LANCL2Q9NS86 450 aa4.96□□□□□ -1.62
CCDC7-211ENST00000638889 SLC17A6Q9P2U8 582 aa4.96□□□□□ -1.62
CCDC7-211ENST00000638889 EDARQ9UNE0 448 aa4.96□□□□□ -1.62
CCDC7-211ENST00000638889 APOBEC2Q9Y235 224 aaKnown RBP4.96□□□□□ -1.62
CCDC7-211ENST00000638889 SETD1BQ9UPS6 1966 aaKnown RBP4.95□□□□□ -1.62
CCDC7-211ENST00000638889 NEMP1O14524 444 aa4.95□□□□□ -1.62
CCDC7-211ENST00000638889 TEX33O43247 280 aa4.95□□□□□ -1.62
CCDC7-211ENST00000638889 MATN4O95460 622 aa4.95□□□□□ -1.62
CCDC7-211ENST00000638889 RAP2AP10114 183 aa4.95□□□□□ -1.62
CCDC7-211ENST00000638889 MYCLP1P12525 358 aaPredicted RBP4.95□□□□□ -1.62
CCDC7-211ENST00000638889 MRPS35P82673 323 aaKnown RBP4.95□□□□□ -1.62
CCDC7-211ENST00000638889 CYP2A13Q16696 494 aa4.95□□□□□ -1.62
CCDC7-211ENST00000638889 SEM1Q6ZVN7 128 aa4.95□□□□□ -1.62
CCDC7-211ENST00000638889 DDX46Q7L014 1031 aaKnown RBP4.95□□□□□ -1.62
CCDC7-211ENST00000638889 GLCCI1Q86VQ1 547 aa4.95□□□□□ -1.62
CCDC7-211ENST00000638889 COLGALT2Q8IYK4 626 aa4.95□□□□□ -1.62
CCDC7-211ENST00000638889 PQLC1Q8N2U9 271 aa4.95□□□□□ -1.62
CCDC7-211ENST00000638889 LNX2Q8N448 690 aa4.95□□□□□ -1.62
CCDC7-211ENST00000638889 HOXB13Q92826 284 aaPredicted RBP4.95□□□□□ -1.62
CCDC7-211ENST00000638889 ORAI2Q96SN7 254 aa4.95□□□□□ -1.62
CCDC7-211ENST00000638889 AIFM2Q9BRQ8 373 aa4.95□□□□□ -1.62
CCDC7-211ENST00000638889 SENP6Q9GZR1 1112 aaPredicted RBP4.95□□□□□ -1.62
CCDC7-211ENST00000638889 IFT122Q9HBG6 1241 aa4.95□□□□□ -1.62
CCDC7-211ENST00000638889 MRPL42Q9Y6G3 142 aaKnown RBP4.95□□□□□ -1.62
CCDC7-211ENST00000638889 WNT10BO00744 389 aa4.94□□□□□ -1.62
CCDC7-211ENST00000638889 ERN1O75460 977 aaKnown RBP4.94□□□□□ -1.62
CCDC7-211ENST00000638889 RBMXL2O75526 392 aaKnown RBP4.94□□□□□ -1.62
CCDC7-211ENST00000638889 C1QL1O75973 258 aa4.94□□□□□ -1.62
CCDC7-211ENST00000638889 ENDOD1O94919 500 aa4.94□□□□□ -1.62
CCDC7-211ENST00000638889 FOXF2Q12947 444 aa4.94□□□□□ -1.62
CCDC7-211ENST00000638889 TAF7LQ5H9L4 462 aa4.94□□□□□ -1.62
CCDC7-211ENST00000638889 PAPD7Q5XG87 772 aaKnown RBP4.94□□□□□ -1.62
CCDC7-211ENST00000638889 KCNK18Q7Z418 384 aa4.94□□□□□ -1.62
CCDC7-211ENST00000638889 SRRM1Q8IYB3 904 aaKnown RBP4.94□□□□□ -1.62
CCDC7-211ENST00000638889 ACTRT2Q8TDY3 377 aa4.94□□□□□ -1.62
CCDC7-211ENST00000638889 ZNF384Q8TF68 577 aa4.94□□□□□ -1.62
CCDC7-211ENST00000638889 LMBR1Q8WVP7 490 aa4.94□□□□□ -1.62
CCDC7-211ENST00000638889 ANKS1AQ92625 1134 aa4.94□□□□□ -1.62
CCDC7-211ENST00000638889 NACC2Q96BF6 587 aa4.94□□□□□ -1.62
CCDC7-211ENST00000638889 CYFIP2Q96F07 1278 aa4.94□□□□□ -1.62
CCDC7-211ENST00000638889 TMEM140Q9NV12 185 aa4.94□□□□□ -1.62
CCDC7-211ENST00000638889 KCTD5Q9NXV2 234 aa4.94□□□□□ -1.62
CCDC7-211ENST00000638889 ZBTB21Q9ULJ3 1066 aa4.94□□□□□ -1.62
CCDC7-211ENST00000638889 SIK3Q9Y2K2 1263 aa4.94□□□□□ -1.62
CCDC7-211ENST00000638889 ENPP3O14638 875 aa4.93□□□□□ -1.62
CCDC7-211ENST00000638889 CKBP12277 381 aa4.93□□□□□ -1.62
CCDC7-211ENST00000638889 ALDH1A3P47895 512 aa4.93□□□□□ -1.62
CCDC7-211ENST00000638889 ID4P47928 161 aa4.93□□□□□ -1.62
CCDC7-211ENST00000638889 VAV2P52735 878 aa4.93□□□□□ -1.62
CCDC7-211ENST00000638889 HSD11B2P80365 405 aa4.93□□□□□ -1.62
CCDC7-211ENST00000638889 RNF180Q86T96 592 aa4.93□□□□□ -1.62
CCDC7-211ENST00000638889 ARHGEF25Q86VW2 580 aa4.93□□□□□ -1.62
CCDC7-211ENST00000638889 FBXO18Q8NFZ0 1043 aa4.93□□□□□ -1.62
CCDC7-211ENST00000638889 NUP133Q8WUM0 1156 aa4.93□□□□□ -1.62
CCDC7-211ENST00000638889 PTCD3Q96EY7 689 aaKnown RBP4.93□□□□□ -1.62
CCDC7-211ENST00000638889 MED15Q96RN5 788 aa4.93□□□□□ -1.62
CCDC7-211ENST00000638889 HEPHQ9BQS7 1158 aa4.93□□□□□ -1.62
CCDC7-211ENST00000638889 ACE2Q9BYF1 805 aaPredicted RBP4.93□□□□□ -1.62
CCDC7-211ENST00000638889 UNKLQ9H9P5 680 aaKnown RBP4.93□□□□□ -1.62
CCDC7-211ENST00000638889 KMT5AQ9NQR1 393 aa4.93□□□□□ -1.62
CCDC7-211ENST00000638889 MTO1Q9Y2Z2 717 aaKnown RBP4.93□□□□□ -1.62
CCDC7-211ENST00000638889 AATKQ6ZMQ8 1374 aa4.92□□□□□ -1.62
CCDC7-211ENST00000638889 GOLGA8AA7E2F4 631 aa4.92□□□□□ -1.62
CCDC7-211ENST00000638889 MGST3O14880 152 aa4.92□□□□□ -1.62
CCDC7-211ENST00000638889 ALAS1P13196 640 aa4.92□□□□□ -1.62
CCDC7-211ENST00000638889 MCAMP43121 646 aa4.92□□□□□ -1.62
CCDC7-211ENST00000638889 PPP3CAQ08209 521 aa4.92□□□□□ -1.62
CCDC7-211ENST00000638889 FAPQ12884 760 aa4.92□□□□□ -1.62
CCDC7-211ENST00000638889 MALLQ13021 153 aa4.92□□□□□ -1.62
CCDC7-211ENST00000638889 ZNF529Q6P280 563 aa4.92□□□□□ -1.62
CCDC7-211ENST00000638889 JAZF1Q86VZ6 243 aa4.92□□□□□ -1.62
CCDC7-211ENST00000638889 PNKPQ96T60 521 aa4.92□□□□□ -1.62
CCDC7-211ENST00000638889 QRSL1Q9H0R6 528 aaKnown RBP4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms