RNA–Protein interactions for RNA: ENST00000638488.1

GFAP-228, Transcript of glial fibrillary acidic protein, humanhuman

TSL 5

Gene GFAP, Length 2,641 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFAP-228ENST00000638488 WDR60Q8WVS4 1066 aa12.92□□□□□ -0.34
GFAP-228ENST00000638488 SYNCQ9H7C4 482 aa12.92□□□□□ -0.34
GFAP-228ENST00000638488 ETNK2Q9NVF9 386 aa12.92□□□□□ -0.34
GFAP-228ENST00000638488 PCDHA1Q9Y5I3 950 aa12.92□□□□□ -0.34
GFAP-228ENST00000638488 A0A0J9YVX5 310 aa12.91□□□□□ -0.34
GFAP-228ENST00000638488 CAPN9O14815 690 aa12.91□□□□□ -0.34
GFAP-228ENST00000638488 RAD17O75943 681 aa12.91□□□□□ -0.34
GFAP-228ENST00000638488 PSMG1O95456 288 aa12.91□□□□□ -0.34
GFAP-228ENST00000638488 SPATA31D3P0C874 917 aa12.91□□□□□ -0.34
GFAP-228ENST00000638488 VAV1P15498 845 aa12.91□□□□□ -0.34
GFAP-228ENST00000638488 POLR2FP61218 127 aaKnown RBP12.91□□□□□ -0.34
GFAP-228ENST00000638488 GRB10Q13322 594 aa12.91□□□□□ -0.34
GFAP-228ENST00000638488 ITGA9Q13797 1035 aa12.91□□□□□ -0.34
GFAP-228ENST00000638488 RAPGEF1Q13905 1077 aa12.91□□□□□ -0.34
GFAP-228ENST00000638488 ABCB5Q2M3G0 1257 aa12.91□□□□□ -0.34
GFAP-228ENST00000638488 CCDC92Q53HC0 331 aaPredicted RBP12.91□□□□□ -0.34
GFAP-228ENST00000638488 SPATA31D4Q6ZUB0 917 aa12.91□□□□□ -0.34
GFAP-228ENST00000638488 GUF1Q8N442 669 aaKnown RBP12.91□□□□□ -0.34
GFAP-228ENST00000638488 ANKRD42Q8N9B4 389 aa12.91□□□□□ -0.34
GFAP-228ENST00000638488 CLMNQ96JQ2 1002 aa12.91□□□□□ -0.34
GFAP-228ENST00000638488 MTMR9Q96QG7 549 aa12.91□□□□□ -0.34
GFAP-228ENST00000638488 PTTG2Q9NZH5 202 aa12.91□□□□□ -0.34
GFAP-228ENST00000638488 BARX2Q9UMQ3 279 aaPredicted RBP12.91□□□□□ -0.34
GFAP-228ENST00000638488 YDJCA8MPS7 323 aa12.91□□□□□ -0.34
GFAP-228ENST00000638488 PODXLO00592 558 aa12.91□□□□□ -0.34
GFAP-228ENST00000638488 HGSO14964 777 aaPredicted RBP12.91□□□□□ -0.34
GFAP-228ENST00000638488 GH2P01242 217 aa12.91□□□□□ -0.34
GFAP-228ENST00000638488 UBTFL6P0CB48 400 aaPredicted RBP12.91□□□□□ -0.34
GFAP-228ENST00000638488 CCNFP41002 786 aa12.91□□□□□ -0.34
GFAP-228ENST00000638488 PSMD7P51665 324 aa12.91□□□□□ -0.34
GFAP-228ENST00000638488 CDR2Q01850 454 aa12.91□□□□□ -0.34
GFAP-228ENST00000638488 MOGSQ13724 837 aa12.91□□□□□ -0.34
GFAP-228ENST00000638488 BTG3Q14201 252 aaPredicted RBP12.91□□□□□ -0.34
GFAP-228ENST00000638488 CCDC174Q6PII3 467 aa12.91□□□□□ -0.34
GFAP-228ENST00000638488 SV2BQ7L1I2 683 aa12.91□□□□□ -0.34
GFAP-228ENST00000638488 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.91□□□□□ -0.34
GFAP-228ENST00000638488 CSRNP1Q96S65 589 aa12.91□□□□□ -0.34
GFAP-228ENST00000638488 LSM14BQ9BX40 385 aaKnown RBP12.91□□□□□ -0.34
GFAP-228ENST00000638488 NT5C3AQ9H0P0 336 aa12.91□□□□□ -0.34
GFAP-228ENST00000638488 GOLPH3Q9H4A6 298 aa12.91□□□□□ -0.34
GFAP-228ENST00000638488 KANSL2Q9H9L4 492 aa12.91□□□□□ -0.34
GFAP-228ENST00000638488 NKIRAS1Q9NYS0 192 aa12.91□□□□□ -0.34
GFAP-228ENST00000638488 CHMP2BQ9UQN3 213 aa12.91□□□□□ -0.34
GFAP-228ENST00000638488 SNX24Q9Y343 169 aa12.91□□□□□ -0.34
GFAP-228ENST00000638488 MYO3BQ8WXR4 1341 aa12.9□□□□□ -0.34
GFAP-228ENST00000638488 F5H6K3 240 aa12.9□□□□□ -0.34
GFAP-228ENST00000638488 DDX3XO00571 662 aaKnown RBP eCLIP12.9□□□□□ -0.34
GFAP-228ENST00000638488 PIM1P11309 404 aaPredicted RBP12.9□□□□□ -0.34
GFAP-228ENST00000638488 R3HDM1Q15032 1099 aaKnown RBP12.9□□□□□ -0.34
GFAP-228ENST00000638488 KBTBD12Q3ZCT8 623 aa12.9□□□□□ -0.34
GFAP-228ENST00000638488 ZNF568Q3ZCX4 644 aa12.9□□□□□ -0.34
GFAP-228ENST00000638488 PHLDB3Q6NSJ2 640 aa12.9□□□□□ -0.34
GFAP-228ENST00000638488 CCDC80Q76M96 950 aa12.9□□□□□ -0.34
GFAP-228ENST00000638488 GDAP1Q8TB36 358 aa12.9□□□□□ -0.34
GFAP-228ENST00000638488 AGAP3Q96P47 875 aa12.9□□□□□ -0.34
GFAP-228ENST00000638488 IDI2Q9BXS1 227 aa12.9□□□□□ -0.34
GFAP-228ENST00000638488 TANGO6Q9C0B7 1094 aa12.9□□□□□ -0.34
GFAP-228ENST00000638488 KCNK9Q9NPC2 374 aa12.9□□□□□ -0.34
GFAP-228ENST00000638488 SERPINA10Q9UK55 444 aa12.9□□□□□ -0.34
GFAP-228ENST00000638488 PFASO15067 1338 aa12.9□□□□□ -0.34
GFAP-228ENST00000638488 TBX10O75333 385 aa12.9□□□□□ -0.35
GFAP-228ENST00000638488 HNRNPCP07910 306 aaKnown RBP eCLIP12.9□□□□□ -0.35
GFAP-228ENST00000638488 HSPA6P17066 643 aa12.9□□□□□ -0.35
GFAP-228ENST00000638488 FGFR4P22455 802 aa12.9□□□□□ -0.35
GFAP-228ENST00000638488 RGS2P41220 211 aa12.9□□□□□ -0.35
GFAP-228ENST00000638488 CD97P48960 835 aa12.9□□□□□ -0.35
GFAP-228ENST00000638488 JAG1P78504 1218 aa12.9□□□□□ -0.35
GFAP-228ENST00000638488 IL9RQ01113 521 aa12.9□□□□□ -0.35
GFAP-228ENST00000638488 KRT79Q5XKE5 535 aa12.9□□□□□ -0.35
GFAP-228ENST00000638488 NCCRP1Q6ZVX7 275 aaPredicted RBP12.9□□□□□ -0.35
GFAP-228ENST00000638488 LARP4BQ92615 738 aaKnown RBP12.9□□□□□ -0.35
GFAP-228ENST00000638488 STMN2Q93045 179 aa12.9□□□□□ -0.35
GFAP-228ENST00000638488 HAUS1Q96CS2 278 aa12.9□□□□□ -0.35
GFAP-228ENST00000638488 PNMA5Q96PV4 448 aa12.9□□□□□ -0.35
GFAP-228ENST00000638488 TUBGCP5Q96RT8 1024 aa12.9□□□□□ -0.35
GFAP-228ENST00000638488 RAB34Q9BZG1 259 aa12.9□□□□□ -0.35
GFAP-228ENST00000638488 TAOK3Q9H2K8 898 aa12.9□□□□□ -0.35
GFAP-228ENST00000638488 KRT82Q9NSB4 513 aa12.9□□□□□ -0.35
GFAP-228ENST00000638488 SPATA7Q9P0W8 599 aa12.9□□□□□ -0.35
GFAP-228ENST00000638488 AMFRQ9UKV5 643 aa12.9□□□□□ -0.35
GFAP-228ENST00000638488 ACTL7BQ9Y614 415 aa12.9□□□□□ -0.35
GFAP-228ENST00000638488 ADGRA3Q8IWK6 1321 aa12.9□□□□□ -0.35
GFAP-228ENST00000638488 MYMKA6NI61 221 aa12.89□□□□□ -0.35
GFAP-228ENST00000638488 BIRC5O15392 142 aa12.89□□□□□ -0.35
GFAP-228ENST00000638488 KRT36O76013 467 aa12.89□□□□□ -0.35
GFAP-228ENST00000638488 BRAFP15056 766 aa12.89□□□□□ -0.35
GFAP-228ENST00000638488 ACSBG2Q5FVE4 666 aa12.89□□□□□ -0.35
GFAP-228ENST00000638488 RGS9BPQ6ZS82 235 aa12.89□□□□□ -0.35
GFAP-228ENST00000638488 KCNK18Q7Z418 384 aa12.89□□□□□ -0.35
GFAP-228ENST00000638488 SIAH1Q8IUQ4 282 aa12.89□□□□□ -0.35
GFAP-228ENST00000638488 MPHOSPH6Q99547 160 aaKnown RBP12.89□□□□□ -0.35
GFAP-228ENST00000638488 TUBB6Q9BUF5 446 aa12.89□□□□□ -0.35
GFAP-228ENST00000638488 BLOC1S4Q9NUP1 217 aa12.89□□□□□ -0.35
GFAP-228ENST00000638488 TBCCD1Q9NVR7 557 aa12.89□□□□□ -0.35
GFAP-228ENST00000638488 ARMCX3Q9UH62 379 aaPredicted RBP12.89□□□□□ -0.35
GFAP-228ENST00000638488 ANGPTL2Q9UKU9 493 aa12.89□□□□□ -0.35
GFAP-228ENST00000638488 NENFQ9UMX5 172 aa12.89□□□□□ -0.35
GFAP-228ENST00000638488 ZCCHC18P0CG32 403 aa12.89□□□□□ -0.35
GFAP-228ENST00000638488 BCRP11274 1271 aa12.89□□□□□ -0.35
GFAP-228ENST00000638488 CLK2P49760 499 aaKnown RBP12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms