RNA–Protein interactions for RNA: ENST00000638141.1

CAPN3-221, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 2,358 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-221ENST00000638141 AP2B1P63010 937 aa12.76□□□□□ -0.37
CAPN3-221ENST00000638141 PLCB3Q01970 1234 aa12.76□□□□□ -0.37
CAPN3-221ENST00000638141 RASGRF1Q13972 1273 aa12.76□□□□□ -0.37
CAPN3-221ENST00000638141 EDRF1Q3B7T1 1238 aa12.76□□□□□ -0.37
CAPN3-221ENST00000638141 TMCO4Q5TGY1 634 aa12.76□□□□□ -0.37
CAPN3-221ENST00000638141 MIGA2Q7L4E1 593 aa12.76□□□□□ -0.37
CAPN3-221ENST00000638141 ABTB1Q969K4 478 aaPredicted RBP12.76□□□□□ -0.37
CAPN3-221ENST00000638141 TTC25Q96NG3 672 aa12.76□□□□□ -0.37
CAPN3-221ENST00000638141 HNRNPABQ99729 332 aaKnown RBP12.76□□□□□ -0.37
CAPN3-221ENST00000638141 SIKE1Q9BRV8 207 aa12.76□□□□□ -0.37
CAPN3-221ENST00000638141 BLOC1S4Q9NUP1 217 aa12.76□□□□□ -0.37
CAPN3-221ENST00000638141 SMG5Q9UPR3 1016 aaKnown RBP12.76□□□□□ -0.37
CAPN3-221ENST00000638141 WASF2Q9Y6W5 498 aa12.76□□□□□ -0.37
CAPN3-221ENST00000638141 ZMYM2Q9UBW7 1377 aa12.76□□□□□ -0.37
CAPN3-221ENST00000638141 hCG_2014768A0A024R1R8 64 aa12.76□□□□□ -0.37
CAPN3-221ENST00000638141 TRIM43BA6NCK2 446 aa12.76□□□□□ -0.37
CAPN3-221ENST00000638141 TMEM110-MUSTN1A8MSY1 372 aa12.76□□□□□ -0.37
CAPN3-221ENST00000638141 TRAF5O00463 557 aa12.76□□□□□ -0.37
CAPN3-221ENST00000638141 CBFA2T3O75081 653 aa12.76□□□□□ -0.37
CAPN3-221ENST00000638141 HAUS5O94927 633 aa12.76□□□□□ -0.37
CAPN3-221ENST00000638141 KRT13P13646 458 aa12.76□□□□□ -0.37
CAPN3-221ENST00000638141 FXR2P51116 673 aaKnown RBP eCLIP12.76□□□□□ -0.37
CAPN3-221ENST00000638141 CAV1Q03135 178 aa12.76□□□□□ -0.37
CAPN3-221ENST00000638141 ARID5AQ03989 594 aa12.76□□□□□ -0.37
CAPN3-221ENST00000638141 CALCOCO2Q13137 446 aa12.76□□□□□ -0.37
CAPN3-221ENST00000638141 DNAJC3Q13217 504 aa12.76□□□□□ -0.37
CAPN3-221ENST00000638141 MED21Q13503 144 aa12.76□□□□□ -0.37
CAPN3-221ENST00000638141 STAT4Q14765 748 aa12.76□□□□□ -0.37
CAPN3-221ENST00000638141 TCEAL1Q15170 157 aa12.76□□□□□ -0.37
CAPN3-221ENST00000638141 MAP3K21Q5TCX8 1036 aa12.76□□□□□ -0.37
CAPN3-221ENST00000638141 FYB2Q5VWT5 728 aa12.76□□□□□ -0.37
CAPN3-221ENST00000638141 C1orf228Q6PIY5 440 aa12.76□□□□□ -0.37
CAPN3-221ENST00000638141 TMEM110Q86TL2 294 aa12.76□□□□□ -0.37
CAPN3-221ENST00000638141 PDSS2Q86YH6 399 aa12.76□□□□□ -0.37
CAPN3-221ENST00000638141 RELL1Q8IUW5 271 aa12.76□□□□□ -0.37
CAPN3-221ENST00000638141 VPS52Q8N1B4 723 aa12.76□□□□□ -0.37
CAPN3-221ENST00000638141 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.76□□□□□ -0.37
CAPN3-221ENST00000638141 DTX3LQ8TDB6 740 aa12.76□□□□□ -0.37
CAPN3-221ENST00000638141 NMD3Q96D46 503 aaKnown RBP12.76□□□□□ -0.37
CAPN3-221ENST00000638141 C18orf8Q96DM3 657 aa12.76□□□□□ -0.37
CAPN3-221ENST00000638141 RBM38Q9H0Z9 239 aaKnown RBP12.76□□□□□ -0.37
CAPN3-221ENST00000638141 SENP1Q9P0U3 644 aa12.76□□□□□ -0.37
CAPN3-221ENST00000638141 PPP1R9AQ9ULJ8 1098 aa12.76□□□□□ -0.37
CAPN3-221ENST00000638141 EFR3BQ9Y2G0 817 aa12.76□□□□□ -0.37
CAPN3-221ENST00000638141 R3HDM2Q9Y2K5 976 aaKnown RBP12.76□□□□□ -0.37
CAPN3-221ENST00000638141 RTCBQ9Y3I0 505 aaKnown RBP12.76□□□□□ -0.37
CAPN3-221ENST00000638141 MINDY4BA8MYZ0 360 aa12.75□□□□□ -0.37
CAPN3-221ENST00000638141 BUD23O43709 281 aaKnown RBP12.75□□□□□ -0.37
CAPN3-221ENST00000638141 FKBP6O75344 327 aa12.75□□□□□ -0.37
CAPN3-221ENST00000638141 UQCRBP14927 111 aa12.75□□□□□ -0.37
CAPN3-221ENST00000638141 LMNB1P20700 586 aa12.75□□□□□ -0.37
CAPN3-221ENST00000638141 GRB10Q13322 594 aa12.75□□□□□ -0.37
CAPN3-221ENST00000638141 INF2Q27J81 1249 aa12.75□□□□□ -0.37
CAPN3-221ENST00000638141 AAGABQ6PD74 315 aa12.75□□□□□ -0.37
CAPN3-221ENST00000638141 CCDC137Q6PK04 289 aaKnown RBP12.75□□□□□ -0.37
CAPN3-221ENST00000638141 SATL1Q86VE3 508 aa12.75□□□□□ -0.37
CAPN3-221ENST00000638141 MORC4Q8TE76 937 aa12.75□□□□□ -0.37
CAPN3-221ENST00000638141 RAD54LQ92698 747 aa12.75□□□□□ -0.37
CAPN3-221ENST00000638141 RAB34Q9BZG1 259 aa12.75□□□□□ -0.37
CAPN3-221ENST00000638141 DMTF1Q9Y222 760 aa12.75□□□□□ -0.37
CAPN3-221ENST00000638141 MAGEB6P1A0A0J9YX57 407 aa12.74□□□□□ -0.37
CAPN3-221ENST00000638141 OPHN1O60890 802 aa12.74□□□□□ -0.37
CAPN3-221ENST00000638141 RARBP10826 455 aa12.74□□□□□ -0.37
CAPN3-221ENST00000638141 TBL3Q12788 808 aaKnown RBP12.74□□□□□ -0.37
CAPN3-221ENST00000638141 PPP2R5CQ13362 524 aa12.74□□□□□ -0.37
CAPN3-221ENST00000638141 THOC5Q13769 683 aaKnown RBP12.74□□□□□ -0.37
CAPN3-221ENST00000638141 TMEM63BQ5T3F8 832 aa12.74□□□□□ -0.37
CAPN3-221ENST00000638141 GRAMD4Q6IC98 578 aa12.74□□□□□ -0.37
CAPN3-221ENST00000638141 TTC27Q6P3X3 843 aa12.74□□□□□ -0.37
CAPN3-221ENST00000638141 OR6Y1Q8NGX8 325 aa12.74□□□□□ -0.37
CAPN3-221ENST00000638141 HPS3Q969F9 1004 aa12.74□□□□□ -0.37
CAPN3-221ENST00000638141 CCDC77Q9BR77 488 aa12.74□□□□□ -0.37
CAPN3-221ENST00000638141 CLIC5Q9NZA1 410 aa12.74□□□□□ -0.37
CAPN3-221ENST00000638141 SAP30BPQ9UHR5 308 aaKnown RBP12.74□□□□□ -0.37
CAPN3-221ENST00000638141 NAALADL1Q9UQQ1 740 aa12.74□□□□□ -0.37
CAPN3-221ENST00000638141 TELO2Q9Y4R8 837 aa12.74□□□□□ -0.37
CAPN3-221ENST00000638141 ZNF862O60290 1169 aa12.74□□□□□ -0.37
CAPN3-221ENST00000638141 ABHD2P08910 425 aa12.74□□□□□ -0.37
CAPN3-221ENST00000638141 UCHL3P15374 230 aa12.74□□□□□ -0.37
CAPN3-221ENST00000638141 ITIH2P19823 946 aa12.74□□□□□ -0.37
CAPN3-221ENST00000638141 PAX3P23760 479 aa12.74□□□□□ -0.37
CAPN3-221ENST00000638141 COILP38432 576 aaPredicted RBP12.74□□□□□ -0.37
CAPN3-221ENST00000638141 GALCP54803 685 aa12.74□□□□□ -0.37
CAPN3-221ENST00000638141 JAM2P57087 298 aa12.74□□□□□ -0.37
CAPN3-221ENST00000638141 ADCY1Q08828 1119 aa12.74□□□□□ -0.37
CAPN3-221ENST00000638141 NONOQ15233 471 aaKnown RBP eCLIP12.74□□□□□ -0.37
CAPN3-221ENST00000638141 TMEM53Q6P2H8 277 aa12.74□□□□□ -0.37
CAPN3-221ENST00000638141 OLFML1Q6UWY5 402 aa12.74□□□□□ -0.37
CAPN3-221ENST00000638141 FRMD5Q7Z6J6 570 aa12.74□□□□□ -0.37
CAPN3-221ENST00000638141 MTDHQ86UE4 582 aaKnown RBP12.74□□□□□ -0.37
CAPN3-221ENST00000638141 SRRM1Q8IYB3 904 aaKnown RBP12.74□□□□□ -0.37
CAPN3-221ENST00000638141 SLC30A5Q8TAD4 765 aa12.74□□□□□ -0.37
CAPN3-221ENST00000638141 MAML1Q92585 1016 aa12.74□□□□□ -0.37
CAPN3-221ENST00000638141 TEKT1Q969V4 418 aa12.74□□□□□ -0.37
CAPN3-221ENST00000638141 CDK5RAP3Q96JB5 506 aa12.74□□□□□ -0.37
CAPN3-221ENST00000638141 ZFRQ96KR1 1074 aaKnown RBP12.74□□□□□ -0.37
CAPN3-221ENST00000638141 BARHL2Q9NY43 387 aa12.74□□□□□ -0.37
CAPN3-221ENST00000638141 TAS2R1Q9NYW7 299 aa12.74□□□□□ -0.37
CAPN3-221ENST00000638141 KIAA1522Q9P206 1035 aaPredicted RBP12.74□□□□□ -0.37
CAPN3-221ENST00000638141 FADS3Q9Y5Q0 445 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 100.4 ms