RNA–Protein interactions for RNA: ENST00000637897.1

PNKP-229, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 190 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-229ENST00000637897 VNN2O95498 520 aa8.6□□□□□ -1.03
PNKP-229ENST00000637897 GLUD1P00367 558 aa8.6□□□□□ -1.03
PNKP-229ENST00000637897 PLS3P13797 630 aa8.6□□□□□ -1.03
PNKP-229ENST00000637897 TKTP29401 623 aaKnown RBP8.6□□□□□ -1.03
PNKP-229ENST00000637897 TNFSF9P41273 254 aa8.6□□□□□ -1.03
PNKP-229ENST00000637897 ZNF131P52739 623 aa8.6□□□□□ -1.03
PNKP-229ENST00000637897 EFNA5P52803 228 aa8.6□□□□□ -1.03
PNKP-229ENST00000637897 NCKAP1LP55160 1127 aa8.6□□□□□ -1.03
PNKP-229ENST00000637897 NCBP1Q09161 790 aaKnown RBP8.6□□□□□ -1.03
PNKP-229ENST00000637897 MCM6Q14566 821 aa8.6□□□□□ -1.03
PNKP-229ENST00000637897 KARSQ15046 597 aaKnown RBP8.6□□□□□ -1.03
PNKP-229ENST00000637897 PPP2R5AQ15172 486 aa8.6□□□□□ -1.03
PNKP-229ENST00000637897 SF3A1Q15459 793 aaKnown RBP8.6□□□□□ -1.03
PNKP-229ENST00000637897 ZRSR1Q15695 479 aaKnown RBP8.6□□□□□ -1.03
PNKP-229ENST00000637897 ZBTB6Q15916 424 aa8.6□□□□□ -1.03
PNKP-229ENST00000637897 USP41Q3LFD5 358 aa8.6□□□□□ -1.03
PNKP-229ENST00000637897 DCAF4L1Q3SXM0 396 aa8.6□□□□□ -1.03
PNKP-229ENST00000637897 L1TD1Q5T7N2 865 aaKnown RBP8.6□□□□□ -1.03
PNKP-229ENST00000637897 FAM171A1Q5VUB5 890 aa8.6□□□□□ -1.03
PNKP-229ENST00000637897 FOXD4L5Q5VV16 416 aaPredicted RBP8.6□□□□□ -1.03
PNKP-229ENST00000637897 ARL6IP4Q66PJ3 421 aaKnown RBP8.6□□□□□ -1.03
PNKP-229ENST00000637897 CWF19L1Q69YN2 538 aaKnown RBP8.6□□□□□ -1.03
PNKP-229ENST00000637897 CES5AQ6NT32 575 aa8.6□□□□□ -1.03
PNKP-229ENST00000637897 C15orf39Q6ZRI6 1047 aa8.6□□□□□ -1.03
PNKP-229ENST00000637897 ZBTB33Q86T24 672 aa8.6□□□□□ -1.03
PNKP-229ENST00000637897 PPFIBP1Q86W92 1011 aa8.6□□□□□ -1.03
PNKP-229ENST00000637897 TMEM105Q8N8V8 129 aa8.6□□□□□ -1.03
PNKP-229ENST00000637897 FOXD4L4Q8WXT5 416 aaPredicted RBP8.6□□□□□ -1.03
PNKP-229ENST00000637897 PBXIP1Q96AQ6 731 aa8.6□□□□□ -1.03
PNKP-229ENST00000637897 DDX27Q96GQ7 796 aaKnown RBP8.6□□□□□ -1.03
PNKP-229ENST00000637897 EPSTI1Q96J88 318 aa8.6□□□□□ -1.03
PNKP-229ENST00000637897 RIPOR3Q96MK2 946 aa8.6□□□□□ -1.03
PNKP-229ENST00000637897 REEP2Q9BRK0 252 aa8.6□□□□□ -1.03
PNKP-229ENST00000637897 WDR6Q9NNW5 1121 aaKnown RBP8.6□□□□□ -1.03
PNKP-229ENST00000637897 KMT5AQ9NQR1 393 aa8.6□□□□□ -1.03
PNKP-229ENST00000637897 CNTN3Q9P232 1028 aa8.6□□□□□ -1.03
PNKP-229ENST00000637897 FBXO2Q9UK22 296 aaPredicted RBP8.6□□□□□ -1.03
PNKP-229ENST00000637897 FBXW11Q9UKB1 542 aa8.6□□□□□ -1.03
PNKP-229ENST00000637897 MTMR6Q9Y217 621 aa8.6□□□□□ -1.03
PNKP-229ENST00000637897 HCN4Q9Y3Q4 1203 aa8.6□□□□□ -1.03
PNKP-229ENST00000637897 PPEF2O14830 753 aa8.59□□□□□ -1.03
PNKP-229ENST00000637897 PI15O43692 258 aa8.59□□□□□ -1.03
PNKP-229ENST00000637897 PRPF40AO75400 957 aaKnown RBP8.59□□□□□ -1.03
PNKP-229ENST00000637897 ZMYND10O75800 440 aa8.59□□□□□ -1.03
PNKP-229ENST00000637897 ADH1AP07327 375 aa8.59□□□□□ -1.03
PNKP-229ENST00000637897 ADRB2P07550 413 aa8.59□□□□□ -1.03
PNKP-229ENST00000637897 SRGAP2BP0DMP2 458 aa8.59□□□□□ -1.03
PNKP-229ENST00000637897 KCNE1P15382 129 aa8.59□□□□□ -1.03
PNKP-229ENST00000637897 PLCG1P19174 1290 aa8.59□□□□□ -1.03
PNKP-229ENST00000637897 AVPR2P30518 371 aa8.59□□□□□ -1.03
PNKP-229ENST00000637897 GUCY2FP51841 1108 aa8.59□□□□□ -1.03
PNKP-229ENST00000637897 WNT7BP56706 349 aa8.59□□□□□ -1.03
PNKP-229ENST00000637897 SPAG1Q07617 926 aa8.59□□□□□ -1.03
PNKP-229ENST00000637897 MCL1Q07820 350 aa8.59□□□□□ -1.03
PNKP-229ENST00000637897 MRPL58Q14197 206 aaKnown RBP8.59□□□□□ -1.03
PNKP-229ENST00000637897 ZNF568Q3ZCX4 644 aa8.59□□□□□ -1.03
PNKP-229ENST00000637897 MPZL3Q6UWV2 235 aa8.59□□□□□ -1.03
PNKP-229ENST00000637897 ALYREFQ86V81 257 aaKnown RBP8.59□□□□□ -1.03
PNKP-229ENST00000637897 FBXL6Q8N531 539 aa8.59□□□□□ -1.03
PNKP-229ENST00000637897 TDRD5Q8NAT2 981 aaKnown RBP8.59□□□□□ -1.03
PNKP-229ENST00000637897 TMEM87AQ8NBN3 555 aa8.59□□□□□ -1.03
PNKP-229ENST00000637897 ZSWIM2Q8NEG5 633 aa8.59□□□□□ -1.03
PNKP-229ENST00000637897 IFT74Q96LB3 600 aa8.59□□□□□ -1.03
PNKP-229ENST00000637897 CLIC6Q96NY7 704 aa8.59□□□□□ -1.03
PNKP-229ENST00000637897 TTPALQ9BTX7 342 aa8.59□□□□□ -1.03
PNKP-229ENST00000637897 STRA6Q9BX79 667 aa8.59□□□□□ -1.03
PNKP-229ENST00000637897 MRPL4Q9BYD3 311 aaKnown RBP8.59□□□□□ -1.03
PNKP-229ENST00000637897 FGFBP2Q9BYJ0 223 aa8.59□□□□□ -1.03
PNKP-229ENST00000637897 PRKD2Q9BZL6 878 aa8.59□□□□□ -1.03
PNKP-229ENST00000637897 GZF1Q9H116 711 aaPredicted RBP8.59□□□□□ -1.03
PNKP-229ENST00000637897 KCNK12Q9HB15 430 aa8.59□□□□□ -1.03
PNKP-229ENST00000637897 MTRRQ9UBK8 725 aa8.59□□□□□ -1.03
PNKP-229ENST00000637897 TUBGCP4Q9UGJ1 667 aa8.59□□□□□ -1.03
PNKP-229ENST00000637897 SORCS3Q9UPU3 1222 aa8.59□□□□□ -1.03
PNKP-229ENST00000637897 ANK1P16157 1881 aa8.59□□□□□ -1.03
PNKP-229ENST00000637897 CLUHO75153 1309 aa8.58□□□□□ -1.04
PNKP-229ENST00000637897 SF3B1O75533 1304 aaKnown RBP eCLIP8.58□□□□□ -1.04
PNKP-229ENST00000637897 VPS13AQ96RL7 3174 aa8.58□□□□□ -1.04
PNKP-229ENST00000637897 TTC26A0AVF1 554 aa8.58□□□□□ -1.04
PNKP-229ENST00000637897 VPS37CA5D8V6 355 aaPredicted RBP8.58□□□□□ -1.04
PNKP-229ENST00000637897 KRBA1A5PL33 1030 aa8.58□□□□□ -1.04
PNKP-229ENST00000637897 GOLGA6L3A6NEY3 463 aa8.58□□□□□ -1.04
PNKP-229ENST00000637897 SHISA7A6NL88 538 aa8.58□□□□□ -1.04
PNKP-229ENST00000637897 ANKRD63C9JTQ0 380 aa8.58□□□□□ -1.04
PNKP-229ENST00000637897 ANHXE9PGG2 379 aa8.58□□□□□ -1.04
PNKP-229ENST00000637897 H3BQV1 296 aa8.58□□□□□ -1.04
PNKP-229ENST00000637897 PPP1R37O75864 691 aa8.58□□□□□ -1.04
PNKP-229ENST00000637897 B3GAT3O94766 335 aa8.58□□□□□ -1.04
PNKP-229ENST00000637897 C1RP00736 705 aa8.58□□□□□ -1.04
PNKP-229ENST00000637897 MCF2P10911 925 aa8.58□□□□□ -1.04
PNKP-229ENST00000637897 MARCKSP29966 332 aaPredicted RBP8.58□□□□□ -1.04
PNKP-229ENST00000637897 NMT1P30419 496 aaKnown RBP8.58□□□□□ -1.04
PNKP-229ENST00000637897 KCNA1Q09470 495 aa8.58□□□□□ -1.04
PNKP-229ENST00000637897 DMP1Q13316 513 aaPredicted RBP8.58□□□□□ -1.04
PNKP-229ENST00000637897 RAB33AQ14088 237 aa8.58□□□□□ -1.04
PNKP-229ENST00000637897 PSMD5Q16401 504 aa8.58□□□□□ -1.04
PNKP-229ENST00000637897 DCLRE1AQ6PJP8 1040 aa8.58□□□□□ -1.04
PNKP-229ENST00000637897 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.58□□□□□ -1.04
PNKP-229ENST00000637897 CEP57Q86XR8 500 aa8.58□□□□□ -1.04
PNKP-229ENST00000637897 ITFG1Q8TB96 612 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms