RNA–Protein interactions for RNA: ENST00000637004.1

CACNA1A-235, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 2,829 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-235ENST00000637004 ZRSR2Q15696 482 aaKnown RBP16.58■□□□□ 0.25
CACNA1A-235ENST00000637004 ZNF449Q6P9G9 518 aa16.58■□□□□ 0.25
CACNA1A-235ENST00000637004 MTHFD1LQ6UB35 978 aa16.58■□□□□ 0.25
CACNA1A-235ENST00000637004 SEPT14Q6ZU15 432 aa16.58■□□□□ 0.25
CACNA1A-235ENST00000637004 CEP128Q6ZU80 1094 aa16.58■□□□□ 0.25
CACNA1A-235ENST00000637004 LRRC8CQ8TDW0 803 aa16.58■□□□□ 0.25
CACNA1A-235ENST00000637004 DENND2DQ9H6A0 471 aaPredicted RBP16.58■□□□□ 0.25
CACNA1A-235ENST00000637004 UBE2TQ9NPD8 197 aaPredicted RBP16.58■□□□□ 0.25
CACNA1A-235ENST00000637004 DNAJC17Q9NVM6 304 aaKnown RBP16.58■□□□□ 0.25
CACNA1A-235ENST00000637004 SDAD1Q9NVU7 687 aaKnown RBP eCLIP16.58■□□□□ 0.25
CACNA1A-235ENST00000637004 DMAC2Q9NW81 257 aa16.58■□□□□ 0.25
CACNA1A-235ENST00000637004 SCOCQ9UIL1 159 aa16.58■□□□□ 0.25
CACNA1A-235ENST00000637004 MROH7Q68CQ1 1323 aa16.58■□□□□ 0.24
CACNA1A-235ENST00000637004 T-ENOLP0DO92 83 aa16.58■□□□□ 0.24
CACNA1A-235ENST00000637004 PTPN4P29074 926 aa16.58■□□□□ 0.24
CACNA1A-235ENST00000637004 NMT1P30419 496 aaKnown RBP16.58■□□□□ 0.24
CACNA1A-235ENST00000637004 SLC16A2P36021 539 aa16.58■□□□□ 0.24
CACNA1A-235ENST00000637004 ADCY8P40145 1251 aa16.58■□□□□ 0.24
CACNA1A-235ENST00000637004 VHLP40337 213 aa16.58■□□□□ 0.24
CACNA1A-235ENST00000637004 SLC18A1P54219 525 aa16.58■□□□□ 0.24
CACNA1A-235ENST00000637004 SNX1Q13596 522 aa16.58■□□□□ 0.24
CACNA1A-235ENST00000637004 Q4G0T1 1027 aa16.58■□□□□ 0.24
CACNA1A-235ENST00000637004 POLR3CQ9BUI4 534 aaPredicted RBP16.58■□□□□ 0.24
CACNA1A-235ENST00000637004 NUP85Q9BW27 656 aa16.58■□□□□ 0.24
CACNA1A-235ENST00000637004 TLE6Q9H808 572 aa16.58■□□□□ 0.24
CACNA1A-235ENST00000637004 DLGAP2Q9P1A6 1054 aa16.58■□□□□ 0.24
CACNA1A-235ENST00000637004 WDR35Q9P2L0 1181 aa16.58■□□□□ 0.24
CACNA1A-235ENST00000637004 IGKV6D-41A0A0C4DH26 115 aa16.57■□□□□ 0.24
CACNA1A-235ENST00000637004 ECE2O60344 883 aa16.57■□□□□ 0.24
CACNA1A-235ENST00000637004 CETPP11597 493 aa16.57■□□□□ 0.24
CACNA1A-235ENST00000637004 SKIP12755 728 aa16.57■□□□□ 0.24
CACNA1A-235ENST00000637004 CHRNA5P30532 468 aa16.57■□□□□ 0.24
CACNA1A-235ENST00000637004 CYP4A11Q02928 519 aa16.57■□□□□ 0.24
CACNA1A-235ENST00000637004 BFSP1Q12934 665 aa16.57■□□□□ 0.24
CACNA1A-235ENST00000637004 TNIP1Q15025 636 aa16.57■□□□□ 0.24
CACNA1A-235ENST00000637004 CCDC6Q16204 474 aa16.57■□□□□ 0.24
CACNA1A-235ENST00000637004 PRR5LQ6MZQ0 368 aa16.57■□□□□ 0.24
CACNA1A-235ENST00000637004 RINT1Q6NUQ1 792 aa16.57■□□□□ 0.24
CACNA1A-235ENST00000637004 RELL1Q8IUW5 271 aa16.57■□□□□ 0.24
CACNA1A-235ENST00000637004 ZNF333Q96JL9 665 aa16.57■□□□□ 0.24
CACNA1A-235ENST00000637004 ZNF219Q9P2Y4 722 aaPredicted RBP16.57■□□□□ 0.24
CACNA1A-235ENST00000637004 UVRAGQ9P2Y5 699 aa16.57■□□□□ 0.24
CACNA1A-235ENST00000637004 SFI1A8K8P3 1242 aa16.57■□□□□ 0.24
CACNA1A-235ENST00000637004 ENTPD5O75356 428 aa16.57■□□□□ 0.24
CACNA1A-235ENST00000637004 ZNF746Q6NUN9 644 aaPredicted RBP16.57■□□□□ 0.24
CACNA1A-235ENST00000637004 SLF2Q8IX21 1173 aa16.57■□□□□ 0.24
CACNA1A-235ENST00000637004 LMO3Q8TAP4 145 aa16.57■□□□□ 0.24
CACNA1A-235ENST00000637004 FAM136AQ96C01 138 aa16.57■□□□□ 0.24
CACNA1A-235ENST00000637004 TRAPPC9Q96Q05 1148 aa16.57■□□□□ 0.24
CACNA1A-235ENST00000637004 PARVGQ9HBI0 331 aa16.57■□□□□ 0.24
CACNA1A-235ENST00000637004 SAR1AQ9NR31 198 aa16.57■□□□□ 0.24
CACNA1A-235ENST00000637004 AGPAT3Q9NRZ7 376 aa16.57■□□□□ 0.24
CACNA1A-235ENST00000637004 SEL1LQ9UBV2 794 aa16.57■□□□□ 0.24
CACNA1A-235ENST00000637004 PCDHA1Q9Y5I3 950 aa16.57■□□□□ 0.24
CACNA1A-235ENST00000637004 RGPD3A6NKT7 1758 aaPredicted RBP16.57■□□□□ 0.24
CACNA1A-235ENST00000637004 RGPD4Q7Z3J3 1758 aa16.57■□□□□ 0.24
CACNA1A-235ENST00000637004 EDF1O60869 148 aaKnown RBP16.56■□□□□ 0.24
CACNA1A-235ENST00000637004 CYP1A2P05177 515 aa16.56■□□□□ 0.24
CACNA1A-235ENST00000637004 AKR1B1P15121 316 aa16.56■□□□□ 0.24
CACNA1A-235ENST00000637004 CHRNB2P17787 502 aa16.56■□□□□ 0.24
CACNA1A-235ENST00000637004 POLD1P28340 1107 aa16.56■□□□□ 0.24
CACNA1A-235ENST00000637004 TMED2Q15363 201 aa16.56■□□□□ 0.24
CACNA1A-235ENST00000637004 ZC2HC1CQ53FD0 456 aaPredicted RBP16.56■□□□□ 0.24
CACNA1A-235ENST00000637004 SLC45A4Q5BKX6 768 aa16.56■□□□□ 0.24
CACNA1A-235ENST00000637004 DPP8Q6V1X1 898 aaPredicted RBP16.56■□□□□ 0.24
CACNA1A-235ENST00000637004 SUPT20HQ8NEM7 779 aa16.56■□□□□ 0.24
CACNA1A-235ENST00000637004 TTC8Q8TAM2 541 aa16.56■□□□□ 0.24
CACNA1A-235ENST00000637004 MAML1Q92585 1016 aa16.56■□□□□ 0.24
CACNA1A-235ENST00000637004 BCAS3Q9H6U6 928 aa16.56■□□□□ 0.24
CACNA1A-235ENST00000637004 EURLQ9NYK6 297 aa16.56■□□□□ 0.24
CACNA1A-235ENST00000637004 CHORDC1Q9UHD1 332 aaPredicted RBP16.56■□□□□ 0.24
CACNA1A-235ENST00000637004 LNPEPQ9UIQ6 1025 aa16.56■□□□□ 0.24
CACNA1A-235ENST00000637004 GSTTP1A0A1W2PQM5 241 aa16.56■□□□□ 0.24
CACNA1A-235ENST00000637004 PRPF4O43172 522 aaKnown RBP eCLIP16.56■□□□□ 0.24
CACNA1A-235ENST00000637004 ABHD2P08910 425 aa16.56■□□□□ 0.24
CACNA1A-235ENST00000637004 MUTP22033 750 aa16.56■□□□□ 0.24
CACNA1A-235ENST00000637004 RHBDL3P58872 404 aa16.56■□□□□ 0.24
CACNA1A-235ENST00000637004 PDK4Q16654 411 aa16.56■□□□□ 0.24
CACNA1A-235ENST00000637004 SLC5A9Q2M3M2 681 aa16.56■□□□□ 0.24
CACNA1A-235ENST00000637004 TMEM63BQ5T3F8 832 aa16.56■□□□□ 0.24
CACNA1A-235ENST00000637004 PSPC1Q8WXF1 523 aaKnown RBP16.56■□□□□ 0.24
CACNA1A-235ENST00000637004 TRIM4Q9C037 500 aa16.56■□□□□ 0.24
CACNA1A-235ENST00000637004 IKZF4Q9H2S9 585 aa16.56■□□□□ 0.24
CACNA1A-235ENST00000637004 NMRK1Q9NWW6 199 aa16.56■□□□□ 0.24
CACNA1A-235ENST00000637004 GTF3C4Q9UKN8 822 aa16.56■□□□□ 0.24
CACNA1A-235ENST00000637004 SMG5Q9UPR3 1016 aaKnown RBP16.56■□□□□ 0.24
CACNA1A-235ENST00000637004 TNRC6CQ9HCJ0 1690 aaKnown RBP16.56■□□□□ 0.24
CACNA1A-235ENST00000637004 RGL2O15211 777 aa16.55■□□□□ 0.24
CACNA1A-235ENST00000637004 EXOC3O60645 756 aa16.55■□□□□ 0.24
CACNA1A-235ENST00000637004 CBX6O95503 412 aa16.55■□□□□ 0.24
CACNA1A-235ENST00000637004 COG2Q14746 738 aa16.55■□□□□ 0.24
CACNA1A-235ENST00000637004 ATL2Q8NHH9 583 aa16.55■□□□□ 0.24
CACNA1A-235ENST00000637004 SENP1Q9P0U3 644 aa16.55■□□□□ 0.24
CACNA1A-235ENST00000637004 ATMINO43313 823 aaPredicted RBP16.55■□□□□ 0.24
CACNA1A-235ENST00000637004 RFC5P40937 340 aa16.55■□□□□ 0.24
CACNA1A-235ENST00000637004 CDR2Q01850 454 aa16.55■□□□□ 0.24
CACNA1A-235ENST00000637004 OCRLQ01968 901 aa16.55■□□□□ 0.24
CACNA1A-235ENST00000637004 TPTE2Q6XPS3 522 aa16.55■□□□□ 0.24
CACNA1A-235ENST00000637004 TRABD2AQ86V40 505 aa16.55■□□□□ 0.24
CACNA1A-235ENST00000637004 DENND1AQ8TEH3 1009 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms