RNA–Protein interactions for RNA: ENST00000636709.1

CHRNA7-219, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

Gene CHRNA7, Length 7,722 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-219ENST00000636709 NOL9Q5SY16 702 aaKnown RBP9.36□□□□□ -0.91
CHRNA7-219ENST00000636709 CHSY1Q86X52 802 aa9.36□□□□□ -0.91
CHRNA7-219ENST00000636709 SLC30A5Q8TAD4 765 aa9.36□□□□□ -0.91
CHRNA7-219ENST00000636709 TBC1D16Q8TBP0 767 aa9.36□□□□□ -0.91
CHRNA7-219ENST00000636709 OSBPL10Q9BXB5 764 aa9.36□□□□□ -0.91
CHRNA7-219ENST00000636709 BRD8Q9H0E9 1235 aa9.36□□□□□ -0.91
CHRNA7-219ENST00000636709 APOBEC2Q9Y235 224 aaKnown RBP9.36□□□□□ -0.91
CHRNA7-219ENST00000636709 PCDHB12Q9Y5F1 795 aa9.36□□□□□ -0.91
CHRNA7-219ENST00000636709 PPP4R3CPQ6ZMV5 832 aa9.36□□□□□ -0.91
CHRNA7-219ENST00000636709 RGS9BPQ6ZS82 235 aa9.36□□□□□ -0.91
CHRNA7-219ENST00000636709 STAG2Q8N3U4 1231 aa9.36□□□□□ -0.91
CHRNA7-219ENST00000636709 ABTB1Q969K4 478 aaPredicted RBP9.36□□□□□ -0.91
CHRNA7-219ENST00000636709 INTS2Q9H0H0 1204 aaKnown RBP9.36□□□□□ -0.91
CHRNA7-219ENST00000636709 CYP4F11Q9HBI6 524 aa9.36□□□□□ -0.91
CHRNA7-219ENST00000636709 DCP1AQ9NPI6 582 aaPredicted RBP9.36□□□□□ -0.91
CHRNA7-219ENST00000636709 GPR108Q9NPR9 543 aa9.36□□□□□ -0.91
CHRNA7-219ENST00000636709 DCTN3O75935 186 aa9.35□□□□□ -0.91
CHRNA7-219ENST00000636709 LRRC63Q05C16 580 aa9.35□□□□□ -0.91
CHRNA7-219ENST00000636709 KCNH2Q12809 1159 aa9.35□□□□□ -0.91
CHRNA7-219ENST00000636709 NUDCD3Q8IVD9 361 aa9.35□□□□□ -0.91
CHRNA7-219ENST00000636709 OXER1Q8TDS5 423 aa9.35□□□□□ -0.91
CHRNA7-219ENST00000636709 MAP4K1Q92918 833 aa9.35□□□□□ -0.91
CHRNA7-219ENST00000636709 SENP7Q9BQF6 1050 aa9.35□□□□□ -0.91
CHRNA7-219ENST00000636709 NDOR1Q9UHB4 597 aa9.35□□□□□ -0.91
CHRNA7-219ENST00000636709 TFDP2Q14188 446 aa9.35□□□□□ -0.91
CHRNA7-219ENST00000636709 ANGPT1Q15389 498 aa9.35□□□□□ -0.91
CHRNA7-219ENST00000636709 SPATA18Q8TC71 538 aa9.35□□□□□ -0.91
CHRNA7-219ENST00000636709 ALG13Q9NP73 1137 aaKnown RBP9.35□□□□□ -0.91
CHRNA7-219ENST00000636709 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.35□□□□□ -0.91
CHRNA7-219ENST00000636709 EEF2KO00418 725 aaKnown RBP9.35□□□□□ -0.91
CHRNA7-219ENST00000636709 FTLP02792 175 aaPredicted RBP9.35□□□□□ -0.91
CHRNA7-219ENST00000636709 URODP06132 367 aa9.35□□□□□ -0.91
CHRNA7-219ENST00000636709 SLFN14P0C7P3 912 aa9.35□□□□□ -0.91
CHRNA7-219ENST00000636709 CYP19A1P11511 503 aaPredicted RBP9.35□□□□□ -0.91
CHRNA7-219ENST00000636709 ANKRD13AQ8IZ07 590 aa9.35□□□□□ -0.91
CHRNA7-219ENST00000636709 ENAHQ8N8S7 591 aaPredicted RBP9.35□□□□□ -0.91
CHRNA7-219ENST00000636709 MTBPQ96DY7 904 aa9.35□□□□□ -0.91
CHRNA7-219ENST00000636709 SLITRK1Q96PX8 696 aa9.35□□□□□ -0.91
CHRNA7-219ENST00000636709 SH3GLB2Q9NR46 395 aa9.35□□□□□ -0.91
CHRNA7-219ENST00000636709 ASS1P00966 412 aaKnown RBP9.35□□□□□ -0.91
CHRNA7-219ENST00000636709 SKOR1P84550 965 aa9.35□□□□□ -0.91
CHRNA7-219ENST00000636709 ALDH6A1Q02252 535 aaKnown RBP9.35□□□□□ -0.91
CHRNA7-219ENST00000636709 ANKRD49Q8WVL7 239 aa9.35□□□□□ -0.91
CHRNA7-219ENST00000636709 CPB2Q96IY4 423 aa9.35□□□□□ -0.91
CHRNA7-219ENST00000636709 CINPQ9BW66 212 aaPredicted RBP9.35□□□□□ -0.91
CHRNA7-219ENST00000636709 SPASTQ9UBP0 616 aa9.35□□□□□ -0.91
CHRNA7-219ENST00000636709 SNX24Q9Y343 169 aa9.35□□□□□ -0.91
CHRNA7-219ENST00000636709 RASA4BC9J798 803 aa9.35□□□□□ -0.91
CHRNA7-219ENST00000636709 RASA4O43374 803 aa9.35□□□□□ -0.91
CHRNA7-219ENST00000636709 MCF2P10911 925 aa9.35□□□□□ -0.91
CHRNA7-219ENST00000636709 CCNE1P24864 410 aa9.35□□□□□ -0.91
CHRNA7-219ENST00000636709 CCDC15Q0P6D6 951 aa9.35□□□□□ -0.91
CHRNA7-219ENST00000636709 DRAP1Q14919 205 aaPredicted RBP9.35□□□□□ -0.91
CHRNA7-219ENST00000636709 KNOP1Q1ED39 458 aaKnown RBP9.35□□□□□ -0.91
CHRNA7-219ENST00000636709 SV2CQ496J9 727 aa9.35□□□□□ -0.91
CHRNA7-219ENST00000636709 ZBED8Q8IZ13 594 aa9.35□□□□□ -0.91
CHRNA7-219ENST00000636709 BTBD6Q96KE9 485 aa9.35□□□□□ -0.91
CHRNA7-219ENST00000636709 STRBPQ96SI9 672 aaKnown RBP9.35□□□□□ -0.91
CHRNA7-219ENST00000636709 SENP6Q9GZR1 1112 aaPredicted RBP9.35□□□□□ -0.91
CHRNA7-219ENST00000636709 GIMAP4Q9NUV9 329 aa9.35□□□□□ -0.91
CHRNA7-219ENST00000636709 DCTN4Q9UJW0 460 aa9.35□□□□□ -0.91
CHRNA7-219ENST00000636709 APPL1Q9UKG1 709 aa9.35□□□□□ -0.91
CHRNA7-219ENST00000636709 TCF3P15923 654 aa9.35□□□□□ -0.91
CHRNA7-219ENST00000636709 NMT1P30419 496 aaKnown RBP9.35□□□□□ -0.91
CHRNA7-219ENST00000636709 CLCN1P35523 988 aa9.35□□□□□ -0.91
CHRNA7-219ENST00000636709 PDIA2Q13087 525 aaKnown RBP9.35□□□□□ -0.91
CHRNA7-219ENST00000636709 TMED1Q13445 227 aa9.35□□□□□ -0.91
CHRNA7-219ENST00000636709 E2F5Q15329 346 aa9.35□□□□□ -0.91
CHRNA7-219ENST00000636709 GOLGA7BQ2TAP0 167 aa9.35□□□□□ -0.91
CHRNA7-219ENST00000636709 IPMKQ8NFU5 416 aa9.35□□□□□ -0.91
CHRNA7-219ENST00000636709 MAGED4Q96JG8 741 aa9.35□□□□□ -0.91
CHRNA7-219ENST00000636709 COLEC11Q9BWP8 271 aa9.35□□□□□ -0.91
CHRNA7-219ENST00000636709 EXO5Q9H790 373 aa9.35□□□□□ -0.91
CHRNA7-219ENST00000636709 PFKFB3Q16875 520 aaPredicted RBP9.35□□□□□ -0.91
CHRNA7-219ENST00000636709 FAM47EQ6ZV65 393 aa9.35□□□□□ -0.91
CHRNA7-219ENST00000636709 VN1R5Q7Z5H4 357 aa9.35□□□□□ -0.91
CHRNA7-219ENST00000636709 JCADQ9P266 1359 aa9.34□□□□□ -0.91
CHRNA7-219ENST00000636709 PTPRTO14522 1441 aa9.34□□□□□ -0.91
CHRNA7-219ENST00000636709 VTNP04004 478 aa9.34□□□□□ -0.91
CHRNA7-219ENST00000636709 ORC1Q13415 861 aa9.34□□□□□ -0.91
CHRNA7-219ENST00000636709 KYAT1Q16773 422 aa9.34□□□□□ -0.91
CHRNA7-219ENST00000636709 UNC13DQ70J99 1090 aa9.34□□□□□ -0.91
CHRNA7-219ENST00000636709 EPM2AIP1Q7L775 607 aaPredicted RBP9.34□□□□□ -0.91
CHRNA7-219ENST00000636709 DGKHQ86XP1 1220 aa9.34□□□□□ -0.91
CHRNA7-219ENST00000636709 DCP1BQ8IZD4 617 aaKnown RBP9.34□□□□□ -0.91
CHRNA7-219ENST00000636709 ARRDC4Q8NCT1 418 aa9.34□□□□□ -0.91
CHRNA7-219ENST00000636709 CSGALNACT1Q8TDX6 532 aa9.34□□□□□ -0.91
CHRNA7-219ENST00000636709 C1orf54Q8WWF1 131 aa9.34□□□□□ -0.91
CHRNA7-219ENST00000636709 SENP2Q9HC62 589 aa9.34□□□□□ -0.91
CHRNA7-219ENST00000636709 NMRK2Q9NPI5 230 aa9.34□□□□□ -0.91
CHRNA7-219ENST00000636709 SLC38A7Q9NVC3 462 aa9.34□□□□□ -0.91
CHRNA7-219ENST00000636709 EGFRP00533 1210 aa9.34□□□□□ -0.91
CHRNA7-219ENST00000636709 FGFR1P11362 822 aa9.34□□□□□ -0.91
CHRNA7-219ENST00000636709 EIF3EP60228 445 aaKnown RBP9.34□□□□□ -0.91
CHRNA7-219ENST00000636709 RBP5P82980 135 aa9.34□□□□□ -0.91
CHRNA7-219ENST00000636709 TBL3Q12788 808 aaKnown RBP9.34□□□□□ -0.91
CHRNA7-219ENST00000636709 WDR75Q8IWA0 830 aaKnown RBP9.34□□□□□ -0.91
CHRNA7-219ENST00000636709 LINC00116Q8NCU8 138 aa9.34□□□□□ -0.91
CHRNA7-219ENST00000636709 CCDC3Q9BQI4 270 aa9.34□□□□□ -0.91
CHRNA7-219ENST00000636709 PARVAQ9NVD7 372 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms