RNA–Protein interactions for RNA: ENST00000636306.1

CHD2-223, Transcript of chromodomain helicase DNA binding protein 2, human

TSL 5

Gene CHD2, Length 1,755 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHD2-223	ENST00000636306	NOC2L	Q9Y3T9	749 aa	Known RBP	11.46	□□□□□ -0.57
CHD2-223	ENST00000636306	UMODL1	Q5DID0	1318 aa		11.46	□□□□□ -0.57
CHD2-223	ENST00000636306	TLDC2	A0PJX2	215 aa		11.46	□□□□□ -0.58
CHD2-223	ENST00000636306	LRRC53	A6NM62	1247 aa		11.46	□□□□□ -0.58
CHD2-223	ENST00000636306	RASGRF2	O14827	1237 aa		11.46	□□□□□ -0.58
CHD2-223	ENST00000636306	PPP1R11	O60927	126 aa	Predicted RBP	11.46	□□□□□ -0.58
CHD2-223	ENST00000636306	NDUFB10	O96000	172 aa		11.46	□□□□□ -0.58
CHD2-223	ENST00000636306	GH2	P01242	217 aa		11.46	□□□□□ -0.58
CHD2-223	ENST00000636306	ZBTB48	P10074	688 aa	Predicted RBP	11.46	□□□□□ -0.58
CHD2-223	ENST00000636306	RAB15	P59190	212 aa		11.46	□□□□□ -0.58
CHD2-223	ENST00000636306	RPL26	P61254	145 aa	Known RBP	11.46	□□□□□ -0.58
CHD2-223	ENST00000636306	MGAT5	Q09328	741 aa		11.46	□□□□□ -0.58
CHD2-223	ENST00000636306	AUH	Q13825	339 aa	Known RBP	11.46	□□□□□ -0.58
CHD2-223	ENST00000636306	UBE2S	Q16763	222 aa		11.46	□□□□□ -0.58
CHD2-223	ENST00000636306	SPDYE2	Q495Y8	402 aa		11.46	□□□□□ -0.58
CHD2-223	ENST00000636306	TMEM119	Q4V9L6	283 aa		11.46	□□□□□ -0.58
CHD2-223	ENST00000636306	HGSNAT	Q68CP4	663 aa		11.46	□□□□□ -0.58
CHD2-223	ENST00000636306	DUPD1	Q68J44	220 aa		11.46	□□□□□ -0.58
CHD2-223	ENST00000636306	PHLDB3	Q6NSJ2	640 aa		11.46	□□□□□ -0.58
CHD2-223	ENST00000636306	C3orf62	Q6ZUJ4	267 aa		11.46	□□□□□ -0.58
CHD2-223	ENST00000636306	FAM83A	Q86UY5	434 aa		11.46	□□□□□ -0.58
CHD2-223	ENST00000636306	KCTD17	Q8N5Z5	321 aa		11.46	□□□□□ -0.58
CHD2-223	ENST00000636306	PIP4K2C	Q8TBX8	421 aa		11.46	□□□□□ -0.58
CHD2-223	ENST00000636306	RBM46	Q8TBY0	533 aa	Known RBP	11.46	□□□□□ -0.58
CHD2-223	ENST00000636306	RAD54L	Q92698	747 aa		11.46	□□□□□ -0.58
CHD2-223	ENST00000636306	KCNN1	Q92952	543 aa		11.46	□□□□□ -0.58
CHD2-223	ENST00000636306	SLC7A6OS	Q96CW6	309 aa	Predicted RBP	11.46	□□□□□ -0.58
CHD2-223	ENST00000636306	RUNDC3B	Q96NL0	473 aa		11.46	□□□□□ -0.58
CHD2-223	ENST00000636306	ETNK2	Q9NVF9	386 aa		11.46	□□□□□ -0.58
CHD2-223	ENST00000636306	SUCLA2	Q9P2R7	463 aa	Predicted RBP	11.46	□□□□□ -0.58
CHD2-223	ENST00000636306	ANGPTL2	Q9UKU9	493 aa		11.46	□□□□□ -0.58
CHD2-223	ENST00000636306	CYP3A7-CYP3A51P	A0A087WV96	503 aa		11.45	□□□□□ -0.58
CHD2-223	ENST00000636306	PPAN-P2RY11	A0A0B4J1V8	794 aa	Predicted RBP	11.45	□□□□□ -0.58
CHD2-223	ENST00000636306	TMEM247	A6NEH6	219 aa		11.45	□□□□□ -0.58
CHD2-223	ENST00000636306	YDJC	A8MPS7	323 aa		11.45	□□□□□ -0.58
CHD2-223	ENST00000636306	SLC37A4	O43826	429 aa		11.45	□□□□□ -0.58
CHD2-223	ENST00000636306	TBC1D12	O60347	775 aa		11.45	□□□□□ -0.58
CHD2-223	ENST00000636306	SUPT3H	O75486	399 aa		11.45	□□□□□ -0.58
CHD2-223	ENST00000636306	GDF11	O95390	407 aa		11.45	□□□□□ -0.58
CHD2-223	ENST00000636306	ASMTL	O95671	621 aa		11.45	□□□□□ -0.58
CHD2-223	ENST00000636306	CYP3A7	P24462	503 aa		11.45	□□□□□ -0.58
CHD2-223	ENST00000636306	KLRC1	P26715	233 aa		11.45	□□□□□ -0.58
CHD2-223	ENST00000636306	CLCN2	P51788	898 aa		11.45	□□□□□ -0.58
CHD2-223	ENST00000636306	PDE1B	Q01064	536 aa		11.45	□□□□□ -0.58
CHD2-223	ENST00000636306	SF3A3	Q12874	501 aa	Known RBP eCLIP	11.45	□□□□□ -0.58	7e-11	■■■■□ 19.6
CHD2-223	ENST00000636306	GRB10	Q13322	594 aa		11.45	□□□□□ -0.58
CHD2-223	ENST00000636306	MAN2A1	Q16706	1144 aa		11.45	□□□□□ -0.58
CHD2-223	ENST00000636306	P3H1	Q32P28	736 aa		11.45	□□□□□ -0.58
CHD2-223	ENST00000636306	HYI	Q5T013	277 aa		11.45	□□□□□ -0.58
CHD2-223	ENST00000636306	MFSD4B	Q5TF39	518 aa		11.45	□□□□□ -0.58
CHD2-223	ENST00000636306	CHADL	Q6NUI6	762 aa		11.45	□□□□□ -0.58
CHD2-223	ENST00000636306	OLFML1	Q6UWY5	402 aa		11.45	□□□□□ -0.58
CHD2-223	ENST00000636306	FAM160B2	Q86V87	743 aa		11.45	□□□□□ -0.58
CHD2-223	ENST00000636306	PASD1	Q8IV76	773 aa		11.45	□□□□□ -0.58
CHD2-223	ENST00000636306	CHURC1	Q8WUH1	139 aa		11.45	□□□□□ -0.58
CHD2-223	ENST00000636306	MBOAT7	Q96N66	472 aa		11.45	□□□□□ -0.58
CHD2-223	ENST00000636306	TSG101	Q99816	390 aa		11.45	□□□□□ -0.58
CHD2-223	ENST00000636306	DDX47	Q9H0S4	455 aa	Known RBP	11.45	□□□□□ -0.58
CHD2-223	ENST00000636306	SYNC	Q9H7C4	482 aa		11.45	□□□□□ -0.58
CHD2-223	ENST00000636306	GINM1	Q9NU53	330 aa		11.45	□□□□□ -0.58
CHD2-223	ENST00000636306	SLTM	Q9NWH9	1034 aa	Known RBP eCLIP	11.45	□□□□□ -0.58
CHD2-223	ENST00000636306	ZNF70	Q9UC06	446 aa	Predicted RBP	11.45	□□□□□ -0.58
CHD2-223	ENST00000636306	ZNRF3	Q9ULT6	936 aa		11.45	□□□□□ -0.58
CHD2-223	ENST00000636306	PCDHA12	Q9UN75	941 aa		11.45	□□□□□ -0.58
CHD2-223	ENST00000636306	STXBP5L	Q9Y2K9	1186 aa		11.45	□□□□□ -0.58
CHD2-223	ENST00000636306	STARD13	Q9Y3M8	1113 aa		11.45	□□□□□ -0.58
CHD2-223	ENST00000636306	CCDC162P	A2VCL2	907 aa		11.44	□□□□□ -0.58
CHD2-223	ENST00000636306	FAM196B	A6NMK8	535 aa		11.44	□□□□□ -0.58
CHD2-223	ENST00000636306	TMEM110-MUSTN1	A8MSY1	372 aa		11.44	□□□□□ -0.58
CHD2-223	ENST00000636306		H0Y3Z8	333 aa		11.44	□□□□□ -0.58
CHD2-223	ENST00000636306	TTI1	O43156	1089 aa		11.44	□□□□□ -0.58
CHD2-223	ENST00000636306	PSMG1	O95456	288 aa		11.44	□□□□□ -0.58
CHD2-223	ENST00000636306	HOXD12	P35452	270 aa		11.44	□□□□□ -0.58
CHD2-223	ENST00000636306	CCNF	P41002	786 aa		11.44	□□□□□ -0.58
CHD2-223	ENST00000636306	STAT2	P52630	851 aa		11.44	□□□□□ -0.58
CHD2-223	ENST00000636306	RNASE9	P60153	205 aa	Known RBP	11.44	□□□□□ -0.58
CHD2-223	ENST00000636306	TGFB2	P61812	414 aa		11.44	□□□□□ -0.58
CHD2-223	ENST00000636306	GSTM4	Q03013	218 aa		11.44	□□□□□ -0.58
CHD2-223	ENST00000636306	LRRC63	Q05C16	580 aa		11.44	□□□□□ -0.58
CHD2-223	ENST00000636306	DHX34	Q14147	1143 aa	Known RBP	11.44	□□□□□ -0.58
CHD2-223	ENST00000636306	SLC18A3	Q16572	532 aa		11.44	□□□□□ -0.58
CHD2-223	ENST00000636306	WDR72	Q3MJ13	1102 aa		11.44	□□□□□ -0.58
CHD2-223	ENST00000636306	HS2ST1	Q7LGA3	356 aa		11.44	□□□□□ -0.58
CHD2-223	ENST00000636306	TMEM110	Q86TL2	294 aa		11.44	□□□□□ -0.58
CHD2-223	ENST00000636306	MAP7D3	Q8IWC1	876 aa		11.44	□□□□□ -0.58
CHD2-223	ENST00000636306	SCUBE1	Q8IWY4	988 aa		11.44	□□□□□ -0.58
CHD2-223	ENST00000636306	SLC15A3	Q8IY34	581 aa		11.44	□□□□□ -0.58
CHD2-223	ENST00000636306	NRG4	Q8WWG1	115 aa		11.44	□□□□□ -0.58
CHD2-223	ENST00000636306	MPP4	Q96JB8	637 aa		11.44	□□□□□ -0.58
CHD2-223	ENST00000636306	PRMT6	Q96LA8	375 aa	Predicted RBP	11.44	□□□□□ -0.58
CHD2-223	ENST00000636306	SERPINB12	Q96P63	405 aa		11.44	□□□□□ -0.58
CHD2-223	ENST00000636306	GML	Q99445	158 aa		11.44	□□□□□ -0.58
CHD2-223	ENST00000636306	PLIN2	Q99541	437 aa		11.44	□□□□□ -0.58
CHD2-223	ENST00000636306	ERP44	Q9BS26	406 aa		11.44	□□□□□ -0.58
CHD2-223	ENST00000636306	MTRF1L	Q9UGC7	380 aa	Known RBP	11.44	□□□□□ -0.58
CHD2-223	ENST00000636306	RASAL2	Q9UJF2	1139 aa		11.44	□□□□□ -0.58
CHD2-223	ENST00000636306	ATAD5	Q96QE3	1844 aa		11.44	□□□□□ -0.58
CHD2-223	ENST00000636306	LOXHD1	Q8IVV2	1947 aa		11.44	□□□□□ -0.58
CHD2-223	ENST00000636306	MAGEB2	O15479	319 aa		11.44	□□□□□ -0.58
CHD2-223	ENST00000636306	PLA2G6	O60733	806 aa		11.44	□□□□□ -0.58

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