RNA–Protein interactions for RNA: ENST00000636046.1

CDKL5-210, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 5

Gene CDKL5, Length 100 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-210ENST00000636046 JAMLQ86YT9 394 aa-0.74□□□□□ -2.53
CDKL5-210ENST00000636046 SLC9A9Q8IVB4 645 aa-0.74□□□□□ -2.53
CDKL5-210ENST00000636046 SFTPA1Q8IWL2 248 aa-0.74□□□□□ -2.53
CDKL5-210ENST00000636046 GALNT12Q8IXK2 581 aa-0.74□□□□□ -2.53
CDKL5-210ENST00000636046 ZZZ3Q8IYH5 903 aa-0.74□□□□□ -2.53
CDKL5-210ENST00000636046 CMTR1Q8N1G2 835 aaKnown RBP-0.74□□□□□ -2.53
CDKL5-210ENST00000636046 ARFGAP1Q8N6T3 406 aa-0.74□□□□□ -2.53
CDKL5-210ENST00000636046 MB21D1Q8N884 522 aa-0.74□□□□□ -2.53
CDKL5-210ENST00000636046 CDYL2Q8N8U2 506 aa-0.74□□□□□ -2.53
CDKL5-210ENST00000636046 DTWD2Q8NBA8 298 aa-0.74□□□□□ -2.53
CDKL5-210ENST00000636046 ACBD4Q8NC06 268 aa-0.74□□□□□ -2.53
CDKL5-210ENST00000636046 KCT2Q8NC54 265 aa-0.74□□□□□ -2.53
CDKL5-210ENST00000636046 ZNF540Q8NDQ6 660 aa-0.74□□□□□ -2.53
CDKL5-210ENST00000636046 CPEB3Q8NE35 698 aaKnown RBP-0.74□□□□□ -2.53
CDKL5-210ENST00000636046 CADM4Q8NFZ8 388 aa-0.74□□□□□ -2.53
CDKL5-210ENST00000636046 DDX54Q8TDD1 881 aaKnown RBP-0.74□□□□□ -2.53
CDKL5-210ENST00000636046 SSC4DQ8WTU2 575 aa-0.74□□□□□ -2.53
CDKL5-210ENST00000636046 AKAP1Q92667 903 aaKnown RBP eCLIP-0.74□□□□□ -2.53
CDKL5-210ENST00000636046 RPGRQ92834 1020 aaKnown RBP-0.74□□□□□ -2.53
CDKL5-210ENST00000636046 SMARCD2Q92925 531 aa-0.74□□□□□ -2.53
CDKL5-210ENST00000636046 CUL5Q93034 780 aa-0.74□□□□□ -2.53
CDKL5-210ENST00000636046 FAM104AQ969W3 186 aa-0.74□□□□□ -2.53
CDKL5-210ENST00000636046 DHX58Q96C10 678 aa-0.74□□□□□ -2.53
CDKL5-210ENST00000636046 ZC3H10Q96K80 434 aaKnown RBP-0.74□□□□□ -2.53
CDKL5-210ENST00000636046 LINC00479Q96M42 142 aa-0.74□□□□□ -2.53
CDKL5-210ENST00000636046 TUBA1CQ9BQE3 449 aa-0.74□□□□□ -2.53
CDKL5-210ENST00000636046 TRIM56Q9BRZ2 755 aaKnown RBP-0.74□□□□□ -2.53
CDKL5-210ENST00000636046 C1QTNF4Q9BXJ3 329 aa-0.74□□□□□ -2.53
CDKL5-210ENST00000636046 PINK1Q9BXM7 581 aa-0.74□□□□□ -2.53
CDKL5-210ENST00000636046 RSPO3Q9BXY4 272 aaPredicted RBP-0.74□□□□□ -2.53
CDKL5-210ENST00000636046 PRDM12Q9H4Q4 367 aa-0.74□□□□□ -2.53
CDKL5-210ENST00000636046 CCDC86Q9H6F5 360 aaKnown RBP-0.74□□□□□ -2.53
CDKL5-210ENST00000636046 CLK4Q9HAZ1 481 aaKnown RBP-0.74□□□□□ -2.53
CDKL5-210ENST00000636046 PRDM16Q9HAZ2 1276 aa-0.74□□□□□ -2.53
CDKL5-210ENST00000636046 TXNRD2Q9NNW7 524 aa-0.74□□□□□ -2.53
CDKL5-210ENST00000636046 NGRNQ9NPE2 291 aaKnown RBP-0.74□□□□□ -2.53
CDKL5-210ENST00000636046 MKKSQ9NPJ1 570 aaPredicted RBP-0.74□□□□□ -2.53
CDKL5-210ENST00000636046 PICK1Q9NRD5 415 aa-0.74□□□□□ -2.53
CDKL5-210ENST00000636046 DZANK1Q9NVP4 752 aa-0.74□□□□□ -2.53
CDKL5-210ENST00000636046 EIF2B4Q9UI10 523 aaKnown RBP-0.74□□□□□ -2.53
CDKL5-210ENST00000636046 TCFL5Q9UL49 500 aa-0.74□□□□□ -2.53
CDKL5-210ENST00000636046 KCNH3Q9ULD8 1083 aa-0.74□□□□□ -2.53
CDKL5-210ENST00000636046 PCDHA7Q9UN72 937 aa-0.74□□□□□ -2.53
CDKL5-210ENST00000636046 TCF19Q9Y242 345 aa-0.74□□□□□ -2.53
CDKL5-210ENST00000636046 ZNF652Q9Y2D9 606 aa-0.74□□□□□ -2.53
CDKL5-210ENST00000636046 R3HDM2Q9Y2K5 976 aaKnown RBP-0.74□□□□□ -2.53
CDKL5-210ENST00000636046 KCNK7Q9Y2U2 307 aa-0.74□□□□□ -2.53
CDKL5-210ENST00000636046 ZNF337Q9Y3M9 751 aa-0.74□□□□□ -2.53
CDKL5-210ENST00000636046 RAD54BQ9Y620 910 aa-0.74□□□□□ -2.53
CDKL5-210ENST00000636046 KIF25-AS1Q9Y6Z4 181 aa-0.74□□□□□ -2.53
CDKL5-210ENST00000636046 ZNF462Q96JM2 2506 aa-0.74□□□□□ -2.53
CDKL5-210ENST00000636046 NBEAL1Q6ZS30 2694 aa-0.74□□□□□ -2.53
CDKL5-210ENST00000636046 FAT2Q9NYQ8 4349 aa-0.75□□□□□ -2.53
CDKL5-210ENST00000636046 NLRC5Q86WI3 1866 aa-0.75□□□□□ -2.53
CDKL5-210ENST00000636046 TTC3P53804 2025 aa-0.75□□□□□ -2.53
CDKL5-210ENST00000636046 IGKV2-28A0A075B6P5 120 aa-0.75□□□□□ -2.53
CDKL5-210ENST00000636046 LOC102724159A0A0B4J2E5 919 aa-0.75□□□□□ -2.53
CDKL5-210ENST00000636046 RBM47A0AV96 593 aaKnown RBP-0.75□□□□□ -2.53
CDKL5-210ENST00000636046 TMEM8BA6NDV4 472 aa-0.75□□□□□ -2.53
CDKL5-210ENST00000636046 A8MZ25 164 aa-0.75□□□□□ -2.53
CDKL5-210ENST00000636046 TMEM229AB2RXF0 380 aa-0.75□□□□□ -2.53
CDKL5-210ENST00000636046 TISP43B9A030 160 aa-0.75□□□□□ -2.53
CDKL5-210ENST00000636046 FAM72CH0Y354 149 aa-0.75□□□□□ -2.53
CDKL5-210ENST00000636046 H7C423 109 aa-0.75□□□□□ -2.53
CDKL5-210ENST00000636046 KIAA0391O15091 583 aaKnown RBP-0.75□□□□□ -2.53
CDKL5-210ENST00000636046 RGL2O15211 777 aa-0.75□□□□□ -2.53
CDKL5-210ENST00000636046 HDAC3O15379 428 aa-0.75□□□□□ -2.53
CDKL5-210ENST00000636046 SLC26A4O43511 780 aa-0.75□□□□□ -2.53
CDKL5-210ENST00000636046 BCL2L11O43521 198 aa-0.75□□□□□ -2.53
CDKL5-210ENST00000636046 FAM189A1O60320 539 aa-0.75□□□□□ -2.53
CDKL5-210ENST00000636046 NRP2O60462 931 aa-0.75□□□□□ -2.53
CDKL5-210ENST00000636046 KBTBD11O94819 623 aa-0.75□□□□□ -2.53
CDKL5-210ENST00000636046 IGKV2D-28P01615 120 aa-0.75□□□□□ -2.53
CDKL5-210ENST00000636046 HLA-DOAP06340 250 aa-0.75□□□□□ -2.53
CDKL5-210ENST00000636046 SYPP08247 313 aa-0.75□□□□□ -2.53
CDKL5-210ENST00000636046 SELLP14151 372 aa-0.75□□□□□ -2.53
CDKL5-210ENST00000636046 ZNF44P15621 663 aa-0.75□□□□□ -2.53
CDKL5-210ENST00000636046 DPEP1P16444 411 aa-0.75□□□□□ -2.53
CDKL5-210ENST00000636046 HDCP19113 662 aa-0.75□□□□□ -2.53
CDKL5-210ENST00000636046 KLK2P20151 261 aa-0.75□□□□□ -2.53
CDKL5-210ENST00000636046 UBA1P22314 1058 aaKnown RBP-0.75□□□□□ -2.53
CDKL5-210ENST00000636046 NTF4P34130 210 aa-0.75□□□□□ -2.53
CDKL5-210ENST00000636046 KCNJ4P48050 445 aa-0.75□□□□□ -2.53
CDKL5-210ENST00000636046 ZNF143P52747 638 aaPredicted RBP-0.75□□□□□ -2.53
CDKL5-210ENST00000636046 HIRAP54198 1017 aaPredicted RBP-0.75□□□□□ -2.53
CDKL5-210ENST00000636046 PHEXP78562 749 aa-0.75□□□□□ -2.53
CDKL5-210ENST00000636046 SRSF1Q07955 248 aaKnown RBP eCLIP-0.75□□□□□ -2.53
CDKL5-210ENST00000636046 PCDH1Q08174 1060 aa-0.75□□□□□ -2.53
CDKL5-210ENST00000636046 PPIGQ13427 754 aaKnown RBP eCLIP-0.75□□□□□ -2.53
CDKL5-210ENST00000636046 PWP2Q15269 919 aaKnown RBP-0.75□□□□□ -2.53
CDKL5-210ENST00000636046 SEC23AQ15436 765 aa-0.75□□□□□ -2.53
CDKL5-210ENST00000636046 MAPKAPK3Q16644 382 aa-0.75□□□□□ -2.53
CDKL5-210ENST00000636046 SGSM1Q2NKQ1 1148 aa-0.75□□□□□ -2.53
CDKL5-210ENST00000636046 PROSER3Q2NL68 480 aa-0.75□□□□□ -2.53
CDKL5-210ENST00000636046 COL28A1Q2UY09 1125 aa-0.75□□□□□ -2.53
CDKL5-210ENST00000636046 CR1LQ2VPA4 569 aa-0.75□□□□□ -2.53
CDKL5-210ENST00000636046 BBS9Q3SYG4 887 aa-0.75□□□□□ -2.53
CDKL5-210ENST00000636046 SPDYE7PQ495Y7 208 aa-0.75□□□□□ -2.53
CDKL5-210ENST00000636046 TPRNQ4KMQ1 711 aa-0.75□□□□□ -2.53
CDKL5-210ENST00000636046 PPM1JQ5JR12 505 aa-0.75□□□□□ -2.53
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms