RNA–Protein interactions for RNA: ENST00000636020.1

CLN6-212, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 894 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-212ENST00000636020 TDP2O95551 362 aa20.16■□□□□ 0.82
CLN6-212ENST00000636020 FGFR3P22607 806 aa20.16■□□□□ 0.82
CLN6-212ENST00000636020 HOXC13P31276 330 aa20.16■□□□□ 0.82
CLN6-212ENST00000636020 RAP1GAPP47736 663 aa20.16■□□□□ 0.82
CLN6-212ENST00000636020 MLLT6P55198 1093 aaPredicted RBP20.16■□□□□ 0.82
CLN6-212ENST00000636020 MBTD1Q05BQ5 628 aa20.16■□□□□ 0.82
CLN6-212ENST00000636020 LRRC32Q14392 662 aa20.16■□□□□ 0.82
CLN6-212ENST00000636020 PLA2G2CQ5R387 149 aa20.16■□□□□ 0.82
CLN6-212ENST00000636020 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.16■□□□□ 0.82
CLN6-212ENST00000636020 Q6ZS52 159 aa20.16■□□□□ 0.82
CLN6-212ENST00000636020 TBCKQ8TEA7 893 aa20.16■□□□□ 0.82
CLN6-212ENST00000636020 AKAP13Q12802 2813 aa20.15■□□□□ 0.82
CLN6-212ENST00000636020 ARHGEF37A1IGU5 675 aa20.15■□□□□ 0.82
CLN6-212ENST00000636020 ARNTLO00327 626 aa20.15■□□□□ 0.82
CLN6-212ENST00000636020 POU5F1BQ06416 359 aa20.15■□□□□ 0.82
CLN6-212ENST00000636020 SPIRE1Q08AE8 756 aa20.15■□□□□ 0.82
CLN6-212ENST00000636020 MXD4Q14582 209 aaPredicted RBP20.15■□□□□ 0.82
CLN6-212ENST00000636020 WDR44Q5JSH3 913 aa20.15■□□□□ 0.82
CLN6-212ENST00000636020 SLC27A1Q6PCB7 646 aa20.15■□□□□ 0.82
CLN6-212ENST00000636020 DHX32Q7L7V1 743 aaKnown RBP20.15■□□□□ 0.82
CLN6-212ENST00000636020 CDR2LQ86X02 465 aaPredicted RBP20.15■□□□□ 0.82
CLN6-212ENST00000636020 DEPDC1BQ8WUY9 529 aa20.15■□□□□ 0.82
CLN6-212ENST00000636020 SMARCD2Q92925 531 aa20.15■□□□□ 0.82
CLN6-212ENST00000636020 CDY1Q9Y6F8 540 aa20.15■□□□□ 0.82
CLN6-212ENST00000636020 SETXQ7Z333 2677 aaKnown RBP20.15■□□□□ 0.82
CLN6-212ENST00000636020 CCDC196A0A1B0GTZ2 297 aa20.14■□□□□ 0.81
CLN6-212ENST00000636020 A0A1B0GUA9 196 aa20.14■□□□□ 0.81
CLN6-212ENST00000636020 WDR27A2RRH5 827 aa20.14■□□□□ 0.81
CLN6-212ENST00000636020 ZNF263O14978 683 aa20.14■□□□□ 0.81
CLN6-212ENST00000636020 B4GALT5O43286 388 aa20.14■□□□□ 0.81
CLN6-212ENST00000636020 P4HBP07237 508 aaKnown RBP20.14■□□□□ 0.81
CLN6-212ENST00000636020 VIPR2P41587 438 aa20.14■□□□□ 0.81
CLN6-212ENST00000636020 RING1Q06587 406 aa20.14■□□□□ 0.81
CLN6-212ENST00000636020 NAB2Q15742 525 aa20.14■□□□□ 0.81
CLN6-212ENST00000636020 CCDC148Q8NFR7 591 aa20.14■□□□□ 0.81
CLN6-212ENST00000636020 MSANTD3Q96H12 275 aa20.14■□□□□ 0.81
CLN6-212ENST00000636020 ZSWIM3Q96MP5 696 aa20.14■□□□□ 0.81
CLN6-212ENST00000636020 CORO1BQ9BR76 489 aa20.14■□□□□ 0.81
CLN6-212ENST00000636020 BACE2Q9Y5Z0 518 aa20.14■□□□□ 0.81
CLN6-212ENST00000636020 PTGESO14684 152 aa20.13■□□□□ 0.81
CLN6-212ENST00000636020 ZNF197O14709 1029 aa20.13■□□□□ 0.81
CLN6-212ENST00000636020 GIPC1O14908 333 aa20.13■□□□□ 0.81
CLN6-212ENST00000636020 LRG1P02750 347 aa20.13■□□□□ 0.81
CLN6-212ENST00000636020 SPINK2P20155 84 aa20.13■□□□□ 0.81
CLN6-212ENST00000636020 CCR2P41597 374 aa20.13■□□□□ 0.81
CLN6-212ENST00000636020 PPP2R5CQ13362 524 aa20.13■□□□□ 0.81
CLN6-212ENST00000636020 CACNA2D4Q7Z3S7 1137 aa20.13■□□□□ 0.81
CLN6-212ENST00000636020 MFSD6LQ8IWD5 586 aa20.13■□□□□ 0.81
CLN6-212ENST00000636020 C4orf19Q8IY42 314 aa20.13■□□□□ 0.81
CLN6-212ENST00000636020 GAB3Q8WWW8 586 aa20.13■□□□□ 0.81
CLN6-212ENST00000636020 GATA6Q92908 595 aa20.13■□□□□ 0.81
CLN6-212ENST00000636020 ADAM33Q9BZ11 813 aa20.13■□□□□ 0.81
CLN6-212ENST00000636020 SMOC1Q9H4F8 434 aa20.13■□□□□ 0.81
CLN6-212ENST00000636020 XPNPEP1Q9NQW7 623 aa20.13■□□□□ 0.81
CLN6-212ENST00000636020 LHX6Q9UPM6 363 aa20.13■□□□□ 0.81
CLN6-212ENST00000636020 LOC400499M0QZD8 3231 aa20.13■□□□□ 0.81
CLN6-212ENST00000636020 NCANO14594 1321 aa20.12■□□□□ 0.81
CLN6-212ENST00000636020 THP07101 528 aa20.12■□□□□ 0.81
CLN6-212ENST00000636020 YWHABP31946 246 aaKnown RBP20.12■□□□□ 0.81
CLN6-212ENST00000636020 NOVA1P51513 510 aaKnown RBP20.12■□□□□ 0.81
CLN6-212ENST00000636020 FOXC1Q12948 553 aa20.12■□□□□ 0.81
CLN6-212ENST00000636020 TFDP1Q14186 410 aa20.12■□□□□ 0.81
CLN6-212ENST00000636020 DGKKQ5KSL6 1271 aa20.12■□□□□ 0.81
CLN6-212ENST00000636020 RNF43Q68DV7 783 aa20.12■□□□□ 0.81
CLN6-212ENST00000636020 C1orf228Q6PIY5 440 aa20.12■□□□□ 0.81
CLN6-212ENST00000636020 KBTBD6Q86V97 674 aa20.12■□□□□ 0.81
CLN6-212ENST00000636020 MTRQ99707 1265 aa20.12■□□□□ 0.81
CLN6-212ENST00000636020 TRPV4Q9HBA0 871 aa20.12■□□□□ 0.81
CLN6-212ENST00000636020 VPS54Q9P1Q0 977 aa20.12■□□□□ 0.81
CLN6-212ENST00000636020 VAV3Q9UKW4 847 aa20.12■□□□□ 0.81
CLN6-212ENST00000636020 NAP1L2Q9ULW6 460 aaPredicted RBP20.12■□□□□ 0.81
CLN6-212ENST00000636020 PCDHGA5Q9Y5G8 931 aa20.12■□□□□ 0.81
CLN6-212ENST00000636020 ZBTB39O15060 712 aa20.11■□□□□ 0.81
CLN6-212ENST00000636020 IGFBP6P24592 240 aaPredicted RBP20.11■□□□□ 0.81
CLN6-212ENST00000636020 CAPSQ13938 189 aa20.11■□□□□ 0.81
CLN6-212ENST00000636020 XKR9Q5GH70 373 aa20.11■□□□□ 0.81
CLN6-212ENST00000636020 MOXD1Q6UVY6 613 aa20.11■□□□□ 0.81
CLN6-212ENST00000636020 OTUD6AQ7L8S5 288 aa20.11■□□□□ 0.81
CLN6-212ENST00000636020 ZNF461Q8TAF7 563 aa20.11■□□□□ 0.81
CLN6-212ENST00000636020 NFKBIZQ9BYH8 718 aa20.11■□□□□ 0.81
CLN6-212ENST00000636020 C22orf23Q9BZE7 217 aa20.11■□□□□ 0.81
CLN6-212ENST00000636020 CXCL16Q9H2A7 254 aa20.11■□□□□ 0.81
CLN6-212ENST00000636020 C8orf33Q9H7E9 229 aaPredicted RBP20.11■□□□□ 0.81
CLN6-212ENST00000636020 MOSPD3O75425 235 aa20.1■□□□□ 0.81
CLN6-212ENST00000636020 RPP40O75818 363 aaKnown RBP20.1■□□□□ 0.81
CLN6-212ENST00000636020 ABLIM3O94929 683 aa20.1■□□□□ 0.81
CLN6-212ENST00000636020 TOP3BO95985 862 aaKnown RBP20.1■□□□□ 0.81
CLN6-212ENST00000636020 MPLP40238 635 aa20.1■□□□□ 0.81
CLN6-212ENST00000636020 ZNF252P-AS1Q0IIN9 211 aa20.1■□□□□ 0.81
CLN6-212ENST00000636020 ANKS3Q6ZW76 656 aa20.1■□□□□ 0.81
CLN6-212ENST00000636020 PDZD4Q76G19 769 aaPredicted RBP20.1■□□□□ 0.81
CLN6-212ENST00000636020 CSGALNACT1Q8TDX6 532 aa20.1■□□□□ 0.81
CLN6-212ENST00000636020 ASAP3Q8TDY4 903 aa20.1■□□□□ 0.81
CLN6-212ENST00000636020 DDX27Q96GQ7 796 aaKnown RBP20.1■□□□□ 0.81
CLN6-212ENST00000636020 VPS45Q9NRW7 570 aa20.1■□□□□ 0.81
CLN6-212ENST00000636020 FREM2Q5SZK8 3169 aa20.09■□□□□ 0.81
CLN6-212ENST00000636020 TMEM189-UBE2V1I3L0A0 370 aa20.09■□□□□ 0.81
CLN6-212ENST00000636020 PRRG1O14668 218 aa20.09■□□□□ 0.81
CLN6-212ENST00000636020 TKTP29401 623 aaKnown RBP20.09■□□□□ 0.81
CLN6-212ENST00000636020 ELF1P32519 619 aa20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms