RNA–Protein interactions for RNA: ENST00000635562.1

PSPC1-208, Transcript of paraspeckle component 1, humanhuman

TSL 3

Gene PSPC1, Length 422 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-208ENST00000635562 PCDH8O95206 1070 aa3.45□□□□□ -1.86
PSPC1-208ENST00000635562 APOL3O95236 402 aa3.45□□□□□ -1.86
PSPC1-208ENST00000635562 OSMP13725 252 aa3.45□□□□□ -1.86
PSPC1-208ENST00000635562 KCNA2P16389 499 aa3.45□□□□□ -1.86
PSPC1-208ENST00000635562 TYRP1P17643 537 aa3.45□□□□□ -1.86
PSPC1-208ENST00000635562 CSF2RBP32927 897 aa3.45□□□□□ -1.86
PSPC1-208ENST00000635562 WASP42768 502 aa3.45□□□□□ -1.86
PSPC1-208ENST00000635562 SSR1P43307 286 aaKnown RBP3.45□□□□□ -1.86
PSPC1-208ENST00000635562 ADKP55263 362 aaKnown RBP3.45□□□□□ -1.86
PSPC1-208ENST00000635562 RAC3P60763 192 aa3.45□□□□□ -1.86
PSPC1-208ENST00000635562 ADRM1Q16186 407 aa3.45□□□□□ -1.86
PSPC1-208ENST00000635562 DGKDQ16760 1214 aa3.45□□□□□ -1.86
PSPC1-208ENST00000635562 SPECC1Q5M775 1068 aa3.45□□□□□ -1.86
PSPC1-208ENST00000635562 MBNL2Q5VZF2 373 aaKnown RBP3.45□□□□□ -1.86
PSPC1-208ENST00000635562 TRIM68Q6AZZ1 485 aa3.45□□□□□ -1.86
PSPC1-208ENST00000635562 GRAMD4Q6IC98 578 aa3.45□□□□□ -1.86
PSPC1-208ENST00000635562 TCTN3Q6NUS6 607 aa3.45□□□□□ -1.86
PSPC1-208ENST00000635562 MZT2AQ6P582 158 aa3.45□□□□□ -1.86
PSPC1-208ENST00000635562 LVRNQ6Q4G3 990 aa3.45□□□□□ -1.86
PSPC1-208ENST00000635562 GAREM2Q75VX8 874 aa3.45□□□□□ -1.86
PSPC1-208ENST00000635562 PNMA8AQ86V59 439 aaPredicted RBP3.45□□□□□ -1.86
PSPC1-208ENST00000635562 MORC1Q86VD1 984 aa3.45□□□□□ -1.86
PSPC1-208ENST00000635562 ZNF354CQ86Y25 554 aa3.45□□□□□ -1.86
PSPC1-208ENST00000635562 ATRIPQ8WXE1 791 aa3.45□□□□□ -1.86
PSPC1-208ENST00000635562 ZNF503Q96F45 646 aa3.45□□□□□ -1.86
PSPC1-208ENST00000635562 CARD11Q9BXL7 1154 aa3.45□□□□□ -1.86
PSPC1-208ENST00000635562 OSBPL6Q9BZF3 934 aa3.45□□□□□ -1.86
PSPC1-208ENST00000635562 AURKAIP1Q9NWT8 199 aaPredicted RBP3.45□□□□□ -1.86
PSPC1-208ENST00000635562 C11orf21Q9P2W6 132 aa3.45□□□□□ -1.86
PSPC1-208ENST00000635562 Q9UFV3 132 aa3.45□□□□□ -1.86
PSPC1-208ENST00000635562 IPPQ9Y573 584 aa3.45□□□□□ -1.86
PSPC1-208ENST00000635562 MRFAP1Q9Y605 127 aa3.45□□□□□ -1.86
PSPC1-208ENST00000635562 FAM170AA1A519 330 aa3.44□□□□□ -1.86
PSPC1-208ENST00000635562 GTPBP10A4D1E9 387 aaKnown RBP3.44□□□□□ -1.86
PSPC1-208ENST00000635562 NPIPB8E9PQR5 432 aa3.44□□□□□ -1.86
PSPC1-208ENST00000635562 XPOTO43592 962 aaKnown RBP3.44□□□□□ -1.86
PSPC1-208ENST00000635562 FOXS1O43638 330 aa3.44□□□□□ -1.86
PSPC1-208ENST00000635562 RAD17O75943 681 aa3.44□□□□□ -1.86
PSPC1-208ENST00000635562 PF4V1P10720 104 aa3.44□□□□□ -1.86
PSPC1-208ENST00000635562 VCAM1P19320 739 aa3.44□□□□□ -1.86
PSPC1-208ENST00000635562 LPOP22079 712 aaPredicted RBP3.44□□□□□ -1.86
PSPC1-208ENST00000635562 CCND1P24385 295 aa3.44□□□□□ -1.86
PSPC1-208ENST00000635562 AKAP5P24588 427 aa3.44□□□□□ -1.86
PSPC1-208ENST00000635562 OAS2P29728 719 aaKnown RBP3.44□□□□□ -1.86
PSPC1-208ENST00000635562 ANP32AP39687 249 aaKnown RBP3.44□□□□□ -1.86
PSPC1-208ENST00000635562 ETV4P43268 484 aa3.44□□□□□ -1.86
PSPC1-208ENST00000635562 ZNF132P52740 706 aa3.44□□□□□ -1.86
PSPC1-208ENST00000635562 SLC5A3P53794 718 aa3.44□□□□□ -1.86
PSPC1-208ENST00000635562 NUCB1Q02818 461 aa3.44□□□□□ -1.86
PSPC1-208ENST00000635562 PTH1RQ03431 593 aa3.44□□□□□ -1.86
PSPC1-208ENST00000635562 DPTQ07507 201 aa3.44□□□□□ -1.86
PSPC1-208ENST00000635562 KRTAP1-1Q07627 177 aa3.44□□□□□ -1.86
PSPC1-208ENST00000635562 PPARAQ07869 468 aa3.44□□□□□ -1.86
PSPC1-208ENST00000635562 DDX10Q13206 875 aaKnown RBP3.44□□□□□ -1.86
PSPC1-208ENST00000635562 PDE1CQ14123 709 aaPredicted RBP3.44□□□□□ -1.86
PSPC1-208ENST00000635562 SPIDRQ14159 915 aa3.44□□□□□ -1.86
PSPC1-208ENST00000635562 KRT72Q14CN4 511 aa3.44□□□□□ -1.86
PSPC1-208ENST00000635562 MLC1Q15049 377 aa3.44□□□□□ -1.86
PSPC1-208ENST00000635562 GFOD2Q3B7J2 385 aa3.44□□□□□ -1.86
PSPC1-208ENST00000635562 NRN1LQ496H8 165 aa3.44□□□□□ -1.86
PSPC1-208ENST00000635562 RRP12Q5JTH9 1297 aaKnown RBP3.44□□□□□ -1.86
PSPC1-208ENST00000635562 IL31Q6EBC2 164 aa3.44□□□□□ -1.86
PSPC1-208ENST00000635562 MZT2BQ6NZ67 158 aa3.44□□□□□ -1.86
PSPC1-208ENST00000635562 B3GNT9Q6UX72 402 aa3.44□□□□□ -1.86
PSPC1-208ENST00000635562 EPM2AIP1Q7L775 607 aaPredicted RBP3.44□□□□□ -1.86
PSPC1-208ENST00000635562 POLNQ7Z5Q5 900 aa3.44□□□□□ -1.86
PSPC1-208ENST00000635562 LCA5Q86VQ0 697 aa3.44□□□□□ -1.86
PSPC1-208ENST00000635562 BRSK2Q8IWQ3 736 aa3.44□□□□□ -1.86
PSPC1-208ENST00000635562 TPH2Q8IWU9 490 aa3.44□□□□□ -1.86
PSPC1-208ENST00000635562 ARL6IP6Q8N6S5 226 aa3.44□□□□□ -1.86
PSPC1-208ENST00000635562 GAB3Q8WWW8 586 aa3.44□□□□□ -1.86
PSPC1-208ENST00000635562 NELL1Q92832 810 aa3.44□□□□□ -1.86
PSPC1-208ENST00000635562 COA7Q96BR5 231 aa3.44□□□□□ -1.86
PSPC1-208ENST00000635562 HSPBAP1Q96EW2 488 aa3.44□□□□□ -1.86
PSPC1-208ENST00000635562 NEIL1Q96FI4 390 aaPredicted RBP3.44□□□□□ -1.86
PSPC1-208ENST00000635562 HIST1H2AHQ96KK5 128 aa3.44□□□□□ -1.86
PSPC1-208ENST00000635562 AIFM3Q96NN9 605 aa3.44□□□□□ -1.86
PSPC1-208ENST00000635562 LRRC37BQ96QE4 947 aa3.44□□□□□ -1.86
PSPC1-208ENST00000635562 STRBPQ96SI9 672 aaKnown RBP3.44□□□□□ -1.86
PSPC1-208ENST00000635562 NELL2Q99435 816 aa3.44□□□□□ -1.86
PSPC1-208ENST00000635562 HIST1H2AJQ99878 128 aa3.44□□□□□ -1.86
PSPC1-208ENST00000635562 PTPN18Q99952 460 aa3.44□□□□□ -1.86
PSPC1-208ENST00000635562 NOL10Q9BSC4 688 aaKnown RBP3.44□□□□□ -1.86
PSPC1-208ENST00000635562 SLC12A5Q9H2X9 1139 aa3.44□□□□□ -1.86
PSPC1-208ENST00000635562 TSPY26PQ9H489 355 aa3.44□□□□□ -1.86
PSPC1-208ENST00000635562 SH3GLB2Q9NR46 395 aa3.44□□□□□ -1.86
PSPC1-208ENST00000635562 POLR3BQ9NW08 1133 aaPredicted RBP3.44□□□□□ -1.86
PSPC1-208ENST00000635562 RAI14Q9P0K7 980 aa3.44□□□□□ -1.86
PSPC1-208ENST00000635562 USP25Q9UHP3 1055 aa3.44□□□□□ -1.86
PSPC1-208ENST00000635562 SERPINB13Q9UIV8 391 aa3.44□□□□□ -1.86
PSPC1-208ENST00000635562 MAFFQ9ULX9 164 aa3.44□□□□□ -1.86
PSPC1-208ENST00000635562 USP18Q9UMW8 372 aa3.44□□□□□ -1.86
PSPC1-208ENST00000635562 SMC3Q9UQE7 1217 aa3.44□□□□□ -1.86
PSPC1-208ENST00000635562 SLC30A1Q9Y6M5 507 aa3.44□□□□□ -1.86
PSPC1-208ENST00000635562 A0A1W2PR48 441 aa3.43□□□□□ -1.86
PSPC1-208ENST00000635562 A6NCN8 305 aa3.43□□□□□ -1.86
PSPC1-208ENST00000635562 C19orf81C9J6K1 198 aa3.43□□□□□ -1.86
PSPC1-208ENST00000635562 RRP9O43818 475 aaKnown RBP3.43□□□□□ -1.86
PSPC1-208ENST00000635562 SNX2O60749 519 aa3.43□□□□□ -1.86
PSPC1-208ENST00000635562 TMEM127O75204 238 aa3.43□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms