RNA–Protein interactions for RNA: ENST00000635137.1

PATJ-215, Transcript of PATJ, crumbs cell polarity complex component, human

TSL 1 (best) BASIC

Gene PATJ, Length 2,298 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PATJ-215	ENST00000635137	TMEM191B	P0C7N4	346 aa		13.52	□□□□□ -0.25
PATJ-215	ENST00000635137	TNFSF9	P41273	254 aa		13.52	□□□□□ -0.25
PATJ-215	ENST00000635137	PIK3CA	P42336	1068 aa		13.52	□□□□□ -0.25
PATJ-215	ENST00000635137	MRPS6	P82932	125 aa	Known RBP	13.52	□□□□□ -0.25
PATJ-215	ENST00000635137	ZNF200	P98182	395 aa	Predicted RBP	13.52	□□□□□ -0.25
PATJ-215	ENST00000635137	ARID5A	Q03989	594 aa		13.52	□□□□□ -0.25
PATJ-215	ENST00000635137	HIC1	Q14526	733 aa		13.52	□□□□□ -0.25
PATJ-215	ENST00000635137	ZBTB41	Q5SVQ8	909 aa		13.52	□□□□□ -0.25
PATJ-215	ENST00000635137	SERINC5	Q86VE9	423 aa		13.52	□□□□□ -0.25
PATJ-215	ENST00000635137	KIF18A	Q8NI77	898 aa		13.52	□□□□□ -0.25
PATJ-215	ENST00000635137	ZNF516	Q92618	1163 aa		13.52	□□□□□ -0.25
PATJ-215	ENST00000635137	CPB2	Q96IY4	423 aa		13.52	□□□□□ -0.25
PATJ-215	ENST00000635137	TRIM6	Q9C030	488 aa	Predicted RBP	13.52	□□□□□ -0.25
PATJ-215	ENST00000635137	PLEKHA5	Q9HAU0	1116 aa		13.52	□□□□□ -0.25
PATJ-215	ENST00000635137	TOPORS	Q9NS56	1045 aa	Predicted RBP	13.52	□□□□□ -0.25
PATJ-215	ENST00000635137	TMEM51	Q9NW97	253 aa		13.52	□□□□□ -0.25
PATJ-215	ENST00000635137	MYO1A	Q9UBC5	1043 aa		13.52	□□□□□ -0.25
PATJ-215	ENST00000635137	HLA-DRA	P01903	254 aa		13.51	□□□□□ -0.25
PATJ-215	ENST00000635137	TBXAS1	P24557	533 aa	Predicted RBP	13.51	□□□□□ -0.25
PATJ-215	ENST00000635137	GRM5	P41594	1212 aa		13.51	□□□□□ -0.25
PATJ-215	ENST00000635137	ACLY	P53396	1101 aa		13.51	□□□□□ -0.25
PATJ-215	ENST00000635137	ITGA7	Q13683	1181 aa		13.51	□□□□□ -0.25
PATJ-215	ENST00000635137	ENOX2	Q16206	610 aa	Known RBP	13.51	□□□□□ -0.25
PATJ-215	ENST00000635137	ARHGAP44	Q17R89	818 aa		13.51	□□□□□ -0.25
PATJ-215	ENST00000635137	SEZ6	Q53EL9	994 aa		13.51	□□□□□ -0.25
PATJ-215	ENST00000635137	GDF6	Q6KF10	455 aa	Predicted RBP	13.51	□□□□□ -0.25
PATJ-215	ENST00000635137	TSPAN18	Q96SJ8	248 aa		13.51	□□□□□ -0.25
PATJ-215	ENST00000635137	NOD1	Q9Y239	953 aa		13.51	□□□□□ -0.25
PATJ-215	ENST00000635137	PAXBP1	Q9Y5B6	917 aa		13.51	□□□□□ -0.25
PATJ-215	ENST00000635137	TRPV2	Q9Y5S1	764 aa		13.51	□□□□□ -0.25
PATJ-215	ENST00000635137	CIT	O14578	2027 aa		13.51	□□□□□ -0.25
PATJ-215	ENST00000635137	KIF5C	O60282	957 aa		13.51	□□□□□ -0.25
PATJ-215	ENST00000635137	YARS	P54577	528 aa	Known RBP	13.51	□□□□□ -0.25
PATJ-215	ENST00000635137	KIF5A	Q12840	1032 aa		13.51	□□□□□ -0.25
PATJ-215	ENST00000635137	TRPC3	Q13507	836 aa		13.51	□□□□□ -0.25
PATJ-215	ENST00000635137	BMS1	Q14692	1282 aa	Known RBP	13.51	□□□□□ -0.25
PATJ-215	ENST00000635137	SLC18A3	Q16572	532 aa		13.51	□□□□□ -0.25
PATJ-215	ENST00000635137	PTGIS	Q16647	500 aa		13.51	□□□□□ -0.25
PATJ-215	ENST00000635137	SGSM1	Q2NKQ1	1148 aa		13.51	□□□□□ -0.25
PATJ-215	ENST00000635137	TDRD10	Q5VZ19	366 aa	Known RBP	13.51	□□□□□ -0.25
PATJ-215	ENST00000635137	GJB7	Q6PEY0	223 aa		13.51	□□□□□ -0.25
PATJ-215	ENST00000635137	SEMA4D	Q92854	862 aa		13.51	□□□□□ -0.25
PATJ-215	ENST00000635137	HNRNPUL1	Q9BUJ2	856 aa	Known RBP eCLIP	13.51	□□□□□ -0.25
PATJ-215	ENST00000635137	KBTBD13	C9JR72	458 aa		13.5	□□□□□ -0.25
PATJ-215	ENST00000635137	RBAK-RBAKDN	I3L0D1	243 aa		13.5	□□□□□ -0.25
PATJ-215	ENST00000635137	EVI5	O60447	810 aa		13.5	□□□□□ -0.25
PATJ-215	ENST00000635137	HSPA6	P17066	643 aa		13.5	□□□□□ -0.25
PATJ-215	ENST00000635137	HOXA11	P31270	313 aa	Predicted RBP	13.5	□□□□□ -0.25
PATJ-215	ENST00000635137	OSTN	P61366	133 aa		13.5	□□□□□ -0.25
PATJ-215	ENST00000635137	ETF1	P62495	437 aa	Known RBP	13.5	□□□□□ -0.25
PATJ-215	ENST00000635137	GABPB1	Q06547	395 aa	Predicted RBP	13.5	□□□□□ -0.25
PATJ-215	ENST00000635137	PTK7	Q13308	1070 aa		13.5	□□□□□ -0.25
PATJ-215	ENST00000635137	NCOA4	Q13772	614 aa		13.5	□□□□□ -0.25
PATJ-215	ENST00000635137	ASTE1	Q2TB18	679 aa	Predicted RBP	13.5	□□□□□ -0.25
PATJ-215	ENST00000635137	TRAPPC11	Q7Z392	1133 aa		13.5	□□□□□ -0.25
PATJ-215	ENST00000635137	CDR2L	Q86X02	465 aa	Predicted RBP	13.5	□□□□□ -0.25
PATJ-215	ENST00000635137	ACRBP	Q8NEB7	543 aa		13.5	□□□□□ -0.25
PATJ-215	ENST00000635137	TAF4B	Q92750	862 aa		13.5	□□□□□ -0.25
PATJ-215	ENST00000635137	FAXDC2	Q96IV6	333 aa		13.5	□□□□□ -0.25
PATJ-215	ENST00000635137	IFIH1	Q9BYX4	1025 aa	Known RBP	13.5	□□□□□ -0.25
PATJ-215	ENST00000635137	CDHR5	Q9HBB8	845 aa		13.5	□□□□□ -0.25
PATJ-215	ENST00000635137	PTCH2	Q9Y6C5	1203 aa		13.5	□□□□□ -0.25
PATJ-215	ENST00000635137	MROH7	Q68CQ1	1323 aa		13.5	□□□□□ -0.25
PATJ-215	ENST00000635137	CAND2	O75155	1236 aa		13.5	□□□□□ -0.25
PATJ-215	ENST00000635137	PLEK	P08567	350 aa	Predicted RBP	13.5	□□□□□ -0.25
PATJ-215	ENST00000635137	MAGEA1	P43355	309 aa		13.5	□□□□□ -0.25
PATJ-215	ENST00000635137	VAV2	P52735	878 aa		13.5	□□□□□ -0.25
PATJ-215	ENST00000635137	BPIFB4	P59827	614 aa		13.5	□□□□□ -0.25
PATJ-215	ENST00000635137	TFAM	Q00059	246 aa	Known RBP	13.5	□□□□□ -0.25
PATJ-215	ENST00000635137	LHX8	Q68G74	356 aa		13.5	□□□□□ -0.25
PATJ-215	ENST00000635137	CHST12	Q9NRB3	414 aa		13.5	□□□□□ -0.25
PATJ-215	ENST00000635137	NOL12	Q9UGY1	213 aa	Known RBP eCLIP	13.5	□□□□□ -0.25
PATJ-215	ENST00000635137	DERA	Q9Y315	318 aa		13.5	□□□□□ -0.25
PATJ-215	ENST00000635137	C2CD2	Q9Y426	696 aa		13.5	□□□□□ -0.25
PATJ-215	ENST00000635137	PCDHA13	Q9Y5I0	950 aa		13.5	□□□□□ -0.25
PATJ-215	ENST00000635137		V9GYY5	206 aa	Predicted RBP	13.5	□□□□□ -0.25
PATJ-215	ENST00000635137	ANK1	P16157	1881 aa		13.49	□□□□□ -0.25
PATJ-215	ENST00000635137	FOXN3	O00409	490 aa	Predicted RBP	13.49	□□□□□ -0.25
PATJ-215	ENST00000635137	CXCL8	P10145	99 aa		13.49	□□□□□ -0.25
PATJ-215	ENST00000635137	PTK2	Q05397	1052 aa		13.49	□□□□□ -0.25
PATJ-215	ENST00000635137	LMBRD2	Q68DH5	695 aa	Predicted RBP	13.49	□□□□□ -0.25
PATJ-215	ENST00000635137	ARHGEF19	Q8IW93	802 aa		13.49	□□□□□ -0.25
PATJ-215	ENST00000635137	HELQ	Q8TDG4	1101 aa		13.49	□□□□□ -0.25
PATJ-215	ENST00000635137	PPP1R13L	Q8WUF5	828 aa		13.49	□□□□□ -0.25
PATJ-215	ENST00000635137	SHC3	Q92529	594 aa		13.49	□□□□□ -0.25
PATJ-215	ENST00000635137	DHX38	Q92620	1227 aa	Known RBP	13.49	□□□□□ -0.25
PATJ-215	ENST00000635137	LZTFL1	Q9NQ48	299 aa		13.49	□□□□□ -0.25
PATJ-215	ENST00000635137	ADAMTS1	Q9UHI8	967 aa		13.49	□□□□□ -0.25
PATJ-215	ENST00000635137	PIN4	Q9Y237	131 aa	Known RBP	13.49	□□□□□ -0.25
PATJ-215	ENST00000635137	PTPN22	Q9Y2R2	807 aa		13.49	□□□□□ -0.25
PATJ-215	ENST00000635137	CDY2A	Q9Y6F7	541 aa		13.49	□□□□□ -0.25
PATJ-215	ENST00000635137	LACTBL1	A8MY62	500 aa		13.48	□□□□□ -0.25
PATJ-215	ENST00000635137	GPR182	O15218	404 aa		13.48	□□□□□ -0.25
PATJ-215	ENST00000635137	RPS6KA5	O75582	802 aa		13.48	□□□□□ -0.25
PATJ-215	ENST00000635137	NPTXR	O95502	500 aa		13.48	□□□□□ -0.25
PATJ-215	ENST00000635137	CCDC122	Q5T0U0	273 aa		13.48	□□□□□ -0.25
PATJ-215	ENST00000635137	FAM71A	Q8IYT1	594 aa		13.48	□□□□□ -0.25
PATJ-215	ENST00000635137	HACE1	Q8IYU2	909 aa		13.48	□□□□□ -0.25
PATJ-215	ENST00000635137	OR5B17	Q8NGF7	314 aa		13.48	□□□□□ -0.25
PATJ-215	ENST00000635137	XRN2	Q9H0D6	950 aa	Known RBP eCLIP	13.48	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms