RNA–Protein interactions for RNA: ENST00000633371.1

PHACTR4-209, Transcript of phosphatase and actin regulator 4, humanhuman

TSL 3

Gene PHACTR4, Length 597 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR4-209ENST00000633371 GANQ9H2C0 597 aa15.39■□□□□ 0.05
PHACTR4-209ENST00000633371 ASB7Q9H672 318 aa15.39■□□□□ 0.05
PHACTR4-209ENST00000633371 PLEKHA5Q9HAU0 1116 aa15.39■□□□□ 0.05
PHACTR4-209ENST00000633371 CNTN3Q9P232 1028 aa15.39■□□□□ 0.05
PHACTR4-209ENST00000633371 AJAP1Q9UKB5 411 aaPredicted RBP15.39■□□□□ 0.05
PHACTR4-209ENST00000633371 PLAGL2Q9UPG8 496 aa15.39■□□□□ 0.05
PHACTR4-209ENST00000633371 ITIH6Q6UXX5 1313 aa15.39■□□□□ 0.05
PHACTR4-209ENST00000633371 COL4A6Q14031 1691 aa15.38■□□□□ 0.05
PHACTR4-209ENST00000633371 PTGESO14684 152 aa15.38■□□□□ 0.05
PHACTR4-209ENST00000633371 P4HA2O15460 535 aa15.38■□□□□ 0.05
PHACTR4-209ENST00000633371 PARNO95453 639 aaKnown RBP15.38■□□□□ 0.05
PHACTR4-209ENST00000633371 TPM2P07951 284 aa15.38■□□□□ 0.05
PHACTR4-209ENST00000633371 KCNE1P15382 129 aa15.38■□□□□ 0.05
PHACTR4-209ENST00000633371 TNNI1P19237 187 aa15.38■□□□□ 0.05
PHACTR4-209ENST00000633371 MXI1P50539 228 aa15.38■□□□□ 0.05
PHACTR4-209ENST00000633371 GOLGA8FQ08AF8 430 aa15.38■□□□□ 0.05
PHACTR4-209ENST00000633371 GOLGA8DPQ0D2H9 430 aa15.38■□□□□ 0.05
PHACTR4-209ENST00000633371 SURF1Q15526 300 aa15.38■□□□□ 0.05
PHACTR4-209ENST00000633371 FKBP15Q5T1M5 1219 aa15.38■□□□□ 0.05
PHACTR4-209ENST00000633371 EHBP1Q8NDI1 1231 aa15.38■□□□□ 0.05
PHACTR4-209ENST00000633371 FNBP1Q96RU3 617 aa15.38■□□□□ 0.05
PHACTR4-209ENST00000633371 MTMR12Q9C0I1 747 aa15.38■□□□□ 0.05
PHACTR4-209ENST00000633371 PRDM5Q9NQX1 630 aaPredicted RBP15.38■□□□□ 0.05
PHACTR4-209ENST00000633371 PARP2Q9UGN5 583 aa15.38■□□□□ 0.05
PHACTR4-209ENST00000633371 SIX4Q9UIU6 781 aa15.38■□□□□ 0.05
PHACTR4-209ENST00000633371 SMIM28A0A1B0GU29 152 aa15.37■□□□□ 0.05
PHACTR4-209ENST00000633371 CST3P01034 146 aaPredicted RBP15.37■□□□□ 0.05
PHACTR4-209ENST00000633371 HLA-DRAP01903 254 aa15.37■□□□□ 0.05
PHACTR4-209ENST00000633371 ITGA4P13612 1032 aa15.37■□□□□ 0.05
PHACTR4-209ENST00000633371 CSF2RAP15509 400 aa15.37■□□□□ 0.05
PHACTR4-209ENST00000633371 RAB27AP51159 221 aa15.37■□□□□ 0.05
PHACTR4-209ENST00000633371 SOX4Q06945 474 aaPredicted RBP15.37■□□□□ 0.05
PHACTR4-209ENST00000633371 ARID5BQ14865 1188 aa15.37■□□□□ 0.05
PHACTR4-209ENST00000633371 NAB2Q15742 525 aa15.37■□□□□ 0.05
PHACTR4-209ENST00000633371 SPECC1LQ69YQ0 1117 aa15.37■□□□□ 0.05
PHACTR4-209ENST00000633371 KRT39Q6A163 491 aa15.37■□□□□ 0.05
PHACTR4-209ENST00000633371 MFSD5Q6N075 450 aa15.37■□□□□ 0.05
PHACTR4-209ENST00000633371 GBP6Q6ZN66 633 aa15.37■□□□□ 0.05
PHACTR4-209ENST00000633371 SLC24A5Q71RS6 500 aa15.37■□□□□ 0.05
PHACTR4-209ENST00000633371 C16orf59Q7L2K0 433 aa15.37■□□□□ 0.05
PHACTR4-209ENST00000633371 TRAPPC11Q7Z392 1133 aa15.37■□□□□ 0.05
PHACTR4-209ENST00000633371 C1orf127Q8N9H9 656 aa15.37■□□□□ 0.05
PHACTR4-209ENST00000633371 C18orf25Q96B23 403 aaPredicted RBP15.37■□□□□ 0.05
PHACTR4-209ENST00000633371 ZFP42Q96MM3 310 aa15.37■□□□□ 0.05
PHACTR4-209ENST00000633371 LSM14BQ9BX40 385 aaKnown RBP15.37■□□□□ 0.05
PHACTR4-209ENST00000633371 INTS2Q9H0H0 1204 aaKnown RBP15.37■□□□□ 0.05
PHACTR4-209ENST00000633371 TULP1O00294 542 aaPredicted RBP15.36■□□□□ 0.05
PHACTR4-209ENST00000633371 INPPL1O15357 1258 aa15.36■□□□□ 0.05
PHACTR4-209ENST00000633371 STX10O60499 249 aa15.36■□□□□ 0.05
PHACTR4-209ENST00000633371 N4BP1O75113 896 aaKnown RBP15.36■□□□□ 0.05
PHACTR4-209ENST00000633371 GYPCP04921 128 aa15.36■□□□□ 0.05
PHACTR4-209ENST00000633371 RAG1P15918 1043 aa15.36■□□□□ 0.05
PHACTR4-209ENST00000633371 RFC2P35250 354 aa15.36■□□□□ 0.05
PHACTR4-209ENST00000633371 FXR1P51114 621 aaKnown RBP eCLIP15.36■□□□□ 0.05
PHACTR4-209ENST00000633371 TFAMQ00059 246 aaKnown RBP15.36■□□□□ 0.05
PHACTR4-209ENST00000633371 TMEM132DQ14C87 1099 aa15.36■□□□□ 0.05
PHACTR4-209ENST00000633371 EXOC3L4Q17RC7 722 aa15.36■□□□□ 0.05
PHACTR4-209ENST00000633371 DUOXA2Q1HG44 320 aa15.36■□□□□ 0.05
PHACTR4-209ENST00000633371 GLRA4Q5JXX5 417 aa15.36■□□□□ 0.05
PHACTR4-209ENST00000633371 CLLU1OSQ5K130 101 aa15.36■□□□□ 0.05
PHACTR4-209ENST00000633371 KLHDC7AQ5VTJ3 777 aa15.36■□□□□ 0.05
PHACTR4-209ENST00000633371 GJB7Q6PEY0 223 aa15.36■□□□□ 0.05
PHACTR4-209ENST00000633371 TRIM65Q6PJ69 517 aa15.36■□□□□ 0.05
PHACTR4-209ENST00000633371 ARHGEF19Q8IW93 802 aa15.36■□□□□ 0.05
PHACTR4-209ENST00000633371 CD302Q8IX05 232 aa15.36■□□□□ 0.05
PHACTR4-209ENST00000633371 C7orf61Q8IZ16 206 aa15.36■□□□□ 0.05
PHACTR4-209ENST00000633371 APBB2Q92870 758 aa15.36■□□□□ 0.05
PHACTR4-209ENST00000633371 TATDN2Q93075 761 aa15.36■□□□□ 0.05
PHACTR4-209ENST00000633371 KIF12Q96FN5 646 aa15.36■□□□□ 0.05
PHACTR4-209ENST00000633371 PPP1R10Q96QC0 940 aaKnown RBP15.36■□□□□ 0.05
PHACTR4-209ENST00000633371 GAD1Q99259 594 aa15.36■□□□□ 0.05
PHACTR4-209ENST00000633371 PI4K2AQ9BTU6 479 aa15.36■□□□□ 0.05
PHACTR4-209ENST00000633371 FTHL17Q9BXU8 183 aa15.36■□□□□ 0.05
PHACTR4-209ENST00000633371 APOBEC3GQ9HC16 384 aaKnown RBP15.36■□□□□ 0.05
PHACTR4-209ENST00000633371 PLCB1Q9NQ66 1216 aa15.36■□□□□ 0.05
PHACTR4-209ENST00000633371 GCNT4Q9P109 453 aa15.36■□□□□ 0.05
PHACTR4-209ENST00000633371 TUBGCP4Q9UGJ1 667 aa15.36■□□□□ 0.05
PHACTR4-209ENST00000633371 GIT1Q9Y2X7 761 aa15.36■□□□□ 0.05
PHACTR4-209ENST00000633371 DERAQ9Y315 318 aa15.36■□□□□ 0.05
PHACTR4-209ENST00000633371 C2CD2Q9Y426 696 aa15.36■□□□□ 0.05
PHACTR4-209ENST00000633371 MKI67P46013 3256 aaKnown RBP15.35■□□□□ 0.05
PHACTR4-209ENST00000633371 ARL5CA6NH57 179 aa15.35■□□□□ 0.05
PHACTR4-209ENST00000633371 PPEF2O14830 753 aa15.35■□□□□ 0.05
PHACTR4-209ENST00000633371 OFD1O75665 1012 aa15.35■□□□□ 0.05
PHACTR4-209ENST00000633371 TPM3P06753 285 aa15.35■□□□□ 0.05
PHACTR4-209ENST00000633371 IGFBP6P24592 240 aaPredicted RBP15.35■□□□□ 0.05
PHACTR4-209ENST00000633371 AP3M2P53677 418 aa15.35■□□□□ 0.05
PHACTR4-209ENST00000633371 YARSP54577 528 aaKnown RBP15.35■□□□□ 0.05
PHACTR4-209ENST00000633371 EPHB4P54760 987 aa15.35■□□□□ 0.05
PHACTR4-209ENST00000633371 CCDC173Q0VFZ6 552 aa15.35■□□□□ 0.05
PHACTR4-209ENST00000633371 PHLDB3Q6NSJ2 640 aa15.35■□□□□ 0.05
PHACTR4-209ENST00000633371 CNKSR3Q6P9H4 555 aa15.35■□□□□ 0.05
PHACTR4-209ENST00000633371 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.35■□□□□ 0.05
PHACTR4-209ENST00000633371 USP37Q86T82 979 aa15.35■□□□□ 0.05
PHACTR4-209ENST00000633371 BAP1Q92560 729 aa15.35■□□□□ 0.05
PHACTR4-209ENST00000633371 NAA15Q9BXJ9 866 aaKnown RBP15.35■□□□□ 0.05
PHACTR4-209ENST00000633371 XYLT2Q9H1B5 865 aa15.35■□□□□ 0.05
PHACTR4-209ENST00000633371 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.35■□□□□ 0.052e-7■■■■■ 82.9
PHACTR4-209ENST00000633371 C1orf112Q9NSG2 853 aa15.35■□□□□ 0.05
PHACTR4-209ENST00000633371 FAM207AQ9NSI2 230 aaPredicted RBP15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms