RNA–Protein interactions for RNA: ENST00000632629.1

NPHP3-ACAD11-202, Transcript of NPHP3-ACAD11 readthrough (NMD candidate), humanhuman

APPRIS P1 TSL 2

Gene NPHP3-ACAD11, Length 695 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-ACAD11-202ENST00000632629 RNASE9P60153 205 aaKnown RBP3.95□□□□□ -1.78
NPHP3-ACAD11-202ENST00000632629 ERVK-21P61565 698 aa3.95□□□□□ -1.78
NPHP3-ACAD11-202ENST00000632629 CDK17Q00537 523 aa3.95□□□□□ -1.78
NPHP3-ACAD11-202ENST00000632629 RD3Q7Z3Z2 195 aa3.95□□□□□ -1.78
NPHP3-ACAD11-202ENST00000632629 STRA8Q7Z7C7 330 aa3.95□□□□□ -1.78
NPHP3-ACAD11-202ENST00000632629 SYT12Q8IV01 421 aa3.95□□□□□ -1.78
NPHP3-ACAD11-202ENST00000632629 LCORLQ8N3X6 602 aa3.95□□□□□ -1.78
NPHP3-ACAD11-202ENST00000632629 DDX55Q8NHQ9 600 aaKnown RBP eCLIP3.95□□□□□ -1.78
NPHP3-ACAD11-202ENST00000632629 CEP95Q96GE4 821 aa3.95□□□□□ -1.78
NPHP3-ACAD11-202ENST00000632629 MED15Q96RN5 788 aa3.95□□□□□ -1.78
NPHP3-ACAD11-202ENST00000632629 SENP6Q9GZR1 1112 aaPredicted RBP3.95□□□□□ -1.78
NPHP3-ACAD11-202ENST00000632629 CCM2LQ9NUG4 571 aaPredicted RBP3.95□□□□□ -1.78
NPHP3-ACAD11-202ENST00000632629 SYBUQ9NX95 663 aa3.95□□□□□ -1.78
NPHP3-ACAD11-202ENST00000632629 PHLDB1Q86UU1 1377 aa3.94□□□□□ -1.78
NPHP3-ACAD11-202ENST00000632629 POMCP01189 267 aa3.94□□□□□ -1.78
NPHP3-ACAD11-202ENST00000632629 AGXTP21549 392 aa3.94□□□□□ -1.78
NPHP3-ACAD11-202ENST00000632629 GPR3P46089 330 aa3.94□□□□□ -1.78
NPHP3-ACAD11-202ENST00000632629 PDCD4Q53EL6 469 aaKnown RBP3.94□□□□□ -1.78
NPHP3-ACAD11-202ENST00000632629 EGFLAMQ63HQ2 1017 aa3.94□□□□□ -1.78
NPHP3-ACAD11-202ENST00000632629 METRNLQ641Q3 311 aa3.94□□□□□ -1.78
NPHP3-ACAD11-202ENST00000632629 Q6ZVL8 140 aa3.94□□□□□ -1.78
NPHP3-ACAD11-202ENST00000632629 AMOTL1Q8IY63 956 aa3.94□□□□□ -1.78
NPHP3-ACAD11-202ENST00000632629 PQLC1Q8N2U9 271 aa3.94□□□□□ -1.78
NPHP3-ACAD11-202ENST00000632629 CPEB3Q8NE35 698 aaKnown RBP3.94□□□□□ -1.78
NPHP3-ACAD11-202ENST00000632629 NLGN4YQ8NFZ3 816 aaPredicted RBP3.94□□□□□ -1.78
NPHP3-ACAD11-202ENST00000632629 KRTAP1-5Q9BYS1 174 aa3.94□□□□□ -1.78
NPHP3-ACAD11-202ENST00000632629 QRSL1Q9H0R6 528 aaKnown RBP3.94□□□□□ -1.78
NPHP3-ACAD11-202ENST00000632629 R3HDMLQ9H3Y0 253 aa3.94□□□□□ -1.78
NPHP3-ACAD11-202ENST00000632629 ZNF768Q9H5H4 540 aaKnown RBP3.94□□□□□ -1.78
NPHP3-ACAD11-202ENST00000632629 C14orf119Q9NWQ9 140 aa3.94□□□□□ -1.78
NPHP3-ACAD11-202ENST00000632629 DNAJC28Q9NX36 388 aa3.94□□□□□ -1.78
NPHP3-ACAD11-202ENST00000632629 RNF181Q9P0P0 153 aa3.94□□□□□ -1.78
NPHP3-ACAD11-202ENST00000632629 SAP30BPQ9UHR5 308 aaKnown RBP3.94□□□□□ -1.78
NPHP3-ACAD11-202ENST00000632629 KCNE5Q9UJ90 142 aa3.94□□□□□ -1.78
NPHP3-ACAD11-202ENST00000632629 EDARQ9UNE0 448 aa3.94□□□□□ -1.78
NPHP3-ACAD11-202ENST00000632629 NEU2Q9Y3R4 380 aa3.94□□□□□ -1.78
NPHP3-ACAD11-202ENST00000632629 NOX1Q9Y5S8 564 aa3.94□□□□□ -1.78
NPHP3-ACAD11-202ENST00000632629 GPR45Q9Y5Y3 372 aa3.94□□□□□ -1.78
NPHP3-ACAD11-202ENST00000632629 MYADML2A6NDP7 307 aa3.93□□□□□ -1.78
NPHP3-ACAD11-202ENST00000632629 SGTAO43765 313 aa3.93□□□□□ -1.78
NPHP3-ACAD11-202ENST00000632629 GPR32O75388 356 aa3.93□□□□□ -1.78
NPHP3-ACAD11-202ENST00000632629 PRKD3O94806 890 aa3.93□□□□□ -1.78
NPHP3-ACAD11-202ENST00000632629 EGR2P11161 476 aaPredicted RBP3.93□□□□□ -1.78
NPHP3-ACAD11-202ENST00000632629 SLC16A1P53985 500 aa3.93□□□□□ -1.78
NPHP3-ACAD11-202ENST00000632629 SCAND1P57086 179 aa3.93□□□□□ -1.78
NPHP3-ACAD11-202ENST00000632629 PPP3CAQ08209 521 aa3.93□□□□□ -1.78
NPHP3-ACAD11-202ENST00000632629 KLF1Q13351 362 aaPredicted RBP3.93□□□□□ -1.78
NPHP3-ACAD11-202ENST00000632629 TOR2AQ5JU69 321 aa3.93□□□□□ -1.78
NPHP3-ACAD11-202ENST00000632629 DACT2Q5SW24 774 aa3.93□□□□□ -1.78
NPHP3-ACAD11-202ENST00000632629 AFMIDQ63HM1 303 aa3.93□□□□□ -1.78
NPHP3-ACAD11-202ENST00000632629 ANKS6Q68DC2 871 aa3.93□□□□□ -1.78
NPHP3-ACAD11-202ENST00000632629 MAPKAPK5Q8IW41 473 aa3.93□□□□□ -1.78
NPHP3-ACAD11-202ENST00000632629 UBR7Q8N806 425 aa3.93□□□□□ -1.78
NPHP3-ACAD11-202ENST00000632629 OR56A1Q8NGH5 318 aa3.93□□□□□ -1.78
NPHP3-ACAD11-202ENST00000632629 NUP133Q8WUM0 1156 aa3.93□□□□□ -1.78
NPHP3-ACAD11-202ENST00000632629 MRI1Q9BV20 369 aa3.93□□□□□ -1.78
NPHP3-ACAD11-202ENST00000632629 KLHL11Q9NVR0 708 aa3.93□□□□□ -1.78
NPHP3-ACAD11-202ENST00000632629 MAST3O60307 1309 aa3.93□□□□□ -1.78
NPHP3-ACAD11-202ENST00000632629 ERN1O75460 977 aaKnown RBP3.92□□□□□ -1.78
NPHP3-ACAD11-202ENST00000632629 NDUFA10O95299 355 aa3.92□□□□□ -1.78
NPHP3-ACAD11-202ENST00000632629 ESRRBO95718 433 aa3.92□□□□□ -1.78
NPHP3-ACAD11-202ENST00000632629 TYRP1P17643 537 aa3.92□□□□□ -1.78
NPHP3-ACAD11-202ENST00000632629 FDXRP22570 491 aa3.92□□□□□ -1.78
NPHP3-ACAD11-202ENST00000632629 ADSLP30566 484 aaPredicted RBP3.92□□□□□ -1.78
NPHP3-ACAD11-202ENST00000632629 CHN2P52757 468 aa3.92□□□□□ -1.78
NPHP3-ACAD11-202ENST00000632629 FAM189BP81408 668 aa3.92□□□□□ -1.78
NPHP3-ACAD11-202ENST00000632629 SRSF2Q01130 221 aaKnown RBP3.92□□□□□ -1.78
NPHP3-ACAD11-202ENST00000632629 MPP3Q13368 585 aa3.92□□□□□ -1.78
NPHP3-ACAD11-202ENST00000632629 PPP4R3AQ6IN85 833 aa3.92□□□□□ -1.78
NPHP3-ACAD11-202ENST00000632629 COLGALT2Q8IYK4 626 aa3.92□□□□□ -1.78
NPHP3-ACAD11-202ENST00000632629 TMEM132CQ8N3T6 1108 aa3.92□□□□□ -1.78
NPHP3-ACAD11-202ENST00000632629 ATL2Q8NHH9 583 aa3.92□□□□□ -1.78
NPHP3-ACAD11-202ENST00000632629 ADAM2Q99965 735 aa3.92□□□□□ -1.78
NPHP3-ACAD11-202ENST00000632629 C7orf25Q9BPX7 421 aa3.92□□□□□ -1.78
NPHP3-ACAD11-202ENST00000632629 WDR11Q9BZH6 1224 aa3.92□□□□□ -1.78
NPHP3-ACAD11-202ENST00000632629 PRDM13Q9H4Q3 707 aa3.92□□□□□ -1.78
NPHP3-ACAD11-202ENST00000632629 GALNT9Q9HCQ5 603 aa3.92□□□□□ -1.78
NPHP3-ACAD11-202ENST00000632629 USP15Q9Y4E8 981 aaPredicted RBP3.92□□□□□ -1.78
NPHP3-ACAD11-202ENST00000632629 A0A1B0GTW7 788 aa3.91□□□□□ -1.78
NPHP3-ACAD11-202ENST00000632629 ZNF185O15231 689 aa3.91□□□□□ -1.78
NPHP3-ACAD11-202ENST00000632629 RPLP2P05387 115 aaKnown RBP3.91□□□□□ -1.78
NPHP3-ACAD11-202ENST00000632629 RAP2AP10114 183 aa3.91□□□□□ -1.78
NPHP3-ACAD11-202ENST00000632629 SEC24CP53992 1094 aa3.91□□□□□ -1.78
NPHP3-ACAD11-202ENST00000632629 CTXN1P60606 82 aa3.91□□□□□ -1.78
NPHP3-ACAD11-202ENST00000632629 RESTQ13127 1097 aa3.91□□□□□ -1.78
NPHP3-ACAD11-202ENST00000632629 MTM1Q13496 603 aa3.91□□□□□ -1.78
NPHP3-ACAD11-202ENST00000632629 UBXN2BQ14CS0 331 aa3.91□□□□□ -1.78
NPHP3-ACAD11-202ENST00000632629 RNF187Q5TA31 235 aaPredicted RBP3.91□□□□□ -1.78
NPHP3-ACAD11-202ENST00000632629 FOXR2Q6PJQ5 311 aa3.91□□□□□ -1.78
NPHP3-ACAD11-202ENST00000632629 MIGA2Q7L4E1 593 aa3.91□□□□□ -1.78
NPHP3-ACAD11-202ENST00000632629 FITM2Q8N6M3 262 aa3.91□□□□□ -1.78
NPHP3-ACAD11-202ENST00000632629 RNF169Q8NCN4 708 aa3.91□□□□□ -1.78
NPHP3-ACAD11-202ENST00000632629 BEND2Q8NDZ0 799 aa3.91□□□□□ -1.78
NPHP3-ACAD11-202ENST00000632629 SLC35B2Q8TB61 432 aa3.91□□□□□ -1.78
NPHP3-ACAD11-202ENST00000632629 TGFBRAP1Q8WUH2 860 aa3.91□□□□□ -1.78
NPHP3-ACAD11-202ENST00000632629 CAVIN3Q969G5 261 aa3.91□□□□□ -1.78
NPHP3-ACAD11-202ENST00000632629 PNKPQ96T60 521 aa3.91□□□□□ -1.78
NPHP3-ACAD11-202ENST00000632629 SPC25Q9HBM1 224 aa3.91□□□□□ -1.78
NPHP3-ACAD11-202ENST00000632629 TBCCD1Q9NVR7 557 aa3.91□□□□□ -1.78
NPHP3-ACAD11-202ENST00000632629 DMTF1Q9Y222 760 aa3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms