RNA–Protein interactions for RNA: ENST00000629293.1

LINC00550-201, long intergenic non-protein coding RNA 550, humanhuman

TSL 1 (best) BASIC

Gene LINC00550, Length 3,434 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00550-201ENST00000629293 NLRP11P59045 1033 aaKnown RBP5.37□□□□□ -1.55
LINC00550-201ENST00000629293 ZXDAP98168 799 aa5.37□□□□□ -1.55
LINC00550-201ENST00000629293 ITGB3BPQ13352 177 aaPredicted RBP5.37□□□□□ -1.55
LINC00550-201ENST00000629293 SQSTM1Q13501 440 aa5.37□□□□□ -1.55
LINC00550-201ENST00000629293 HIF1AQ16665 826 aa5.37□□□□□ -1.55
LINC00550-201ENST00000629293 CEP55Q53EZ4 464 aa5.37□□□□□ -1.55
LINC00550-201ENST00000629293 WWC2Q6AWC2 1192 aa5.37□□□□□ -1.55
LINC00550-201ENST00000629293 MTHFD1LQ6UB35 978 aa5.37□□□□□ -1.55
LINC00550-201ENST00000629293 LRRC69Q6ZNQ3 347 aa5.37□□□□□ -1.55
LINC00550-201ENST00000629293 PLA2G4DQ86XP0 818 aa5.37□□□□□ -1.55
LINC00550-201ENST00000629293 CCDC60Q8IWA6 550 aaPredicted RBP5.37□□□□□ -1.55
LINC00550-201ENST00000629293 FANCBQ8NB91 859 aa5.37□□□□□ -1.55
LINC00550-201ENST00000629293 P2RX5Q93086 422 aa5.37□□□□□ -1.55
LINC00550-201ENST00000629293 MSLNLQ96KJ4 702 aa5.37□□□□□ -1.55
LINC00550-201ENST00000629293 MXRA8Q9BRK3 442 aa5.37□□□□□ -1.55
LINC00550-201ENST00000629293 ANO3Q9BYT9 981 aa5.37□□□□□ -1.55
LINC00550-201ENST00000629293 SMOC2Q9H3U7 446 aa5.37□□□□□ -1.55
LINC00550-201ENST00000629293 RC3H2Q9HBD1 1191 aaKnown RBP5.37□□□□□ -1.55
LINC00550-201ENST00000629293 RCOR1Q9UKL0 485 aa5.37□□□□□ -1.55
LINC00550-201ENST00000629293 STRIP2Q9ULQ0 834 aa5.37□□□□□ -1.55
LINC00550-201ENST00000629293 UBIAD1Q9Y5Z9 338 aa5.37□□□□□ -1.55
LINC00550-201ENST00000629293 CEP295Q9C0D2 2601 aa5.37□□□□□ -1.55
LINC00550-201ENST00000629293 EVPLQ92817 2033 aa5.37□□□□□ -1.55
LINC00550-201ENST00000629293 SMCO2A6NFE2 343 aa5.37□□□□□ -1.55
LINC00550-201ENST00000629293 SH2B2O14492 632 aaPredicted RBP5.37□□□□□ -1.55
LINC00550-201ENST00000629293 KIF4AO95239 1232 aa5.37□□□□□ -1.55
LINC00550-201ENST00000629293 SSBP05455 408 aaKnown RBP eCLIP5.37□□□□□ -1.55
LINC00550-201ENST00000629293 FDPSP14324 419 aaKnown RBP5.37□□□□□ -1.55
LINC00550-201ENST00000629293 ZSCAN20P17040 1043 aaPredicted RBP5.37□□□□□ -1.55
LINC00550-201ENST00000629293 ADCY7P51828 1080 aa5.37□□□□□ -1.55
LINC00550-201ENST00000629293 WDR4P57081 412 aaKnown RBP5.37□□□□□ -1.55
LINC00550-201ENST00000629293 WDR44Q5JSH3 913 aa5.37□□□□□ -1.55
LINC00550-201ENST00000629293 SLC24A5Q71RS6 500 aa5.37□□□□□ -1.55
LINC00550-201ENST00000629293 VN1R2Q8NFZ6 395 aa5.37□□□□□ -1.55
LINC00550-201ENST00000629293 TNMDQ9H2S6 317 aa5.37□□□□□ -1.55
LINC00550-201ENST00000629293 ZNF302Q9NR11 478 aa5.37□□□□□ -1.55
LINC00550-201ENST00000629293 SPTLC3Q9NUV7 552 aa5.37□□□□□ -1.55
LINC00550-201ENST00000629293 CFAP45Q9UL16 551 aa5.37□□□□□ -1.55
LINC00550-201ENST00000629293 FNDC3AQ9Y2H6 1198 aaKnown RBP5.37□□□□□ -1.55
LINC00550-201ENST00000629293 KIF3AQ9Y496 699 aa5.37□□□□□ -1.55
LINC00550-201ENST00000629293 CACNA1IQ9P0X4 2223 aa5.37□□□□□ -1.55
LINC00550-201ENST00000629293 TMEM238LA0A1B0GVL6 79 aa5.36□□□□□ -1.55
LINC00550-201ENST00000629293 FAM221AA4D161 298 aa5.36□□□□□ -1.55
LINC00550-201ENST00000629293 H3BQV1 296 aa5.36□□□□□ -1.55
LINC00550-201ENST00000629293 ZC3H11AO75152 810 aaKnown RBP eCLIP5.36□□□□□ -1.55
LINC00550-201ENST00000629293 CCNE2O96020 404 aa5.36□□□□□ -1.55
LINC00550-201ENST00000629293 PTMAP06454 111 aaKnown RBP5.36□□□□□ -1.55
LINC00550-201ENST00000629293 SRGAP2BP0DMP2 458 aa5.36□□□□□ -1.55
LINC00550-201ENST00000629293 SLC19A1P41440 591 aa5.36□□□□□ -1.55
LINC00550-201ENST00000629293 GRIA4P48058 902 aa5.36□□□□□ -1.55
LINC00550-201ENST00000629293 SARSP49591 514 aaKnown RBP5.36□□□□□ -1.55
LINC00550-201ENST00000629293 KRT17Q04695 432 aa5.36□□□□□ -1.55
LINC00550-201ENST00000629293 POU4F2Q12837 409 aa5.36□□□□□ -1.55
LINC00550-201ENST00000629293 PRR16Q569H4 304 aa5.36□□□□□ -1.55
LINC00550-201ENST00000629293 RARS2Q5T160 578 aaKnown RBP5.36□□□□□ -1.55
LINC00550-201ENST00000629293 FAM160B1Q5W0V3 765 aa5.36□□□□□ -1.55
LINC00550-201ENST00000629293 CES5AQ6NT32 575 aa5.36□□□□□ -1.55
LINC00550-201ENST00000629293 TMTC3Q6ZXV5 915 aa5.36□□□□□ -1.55
LINC00550-201ENST00000629293 KIAA0319LQ8IZA0 1049 aa5.36□□□□□ -1.55
LINC00550-201ENST00000629293 KREMEN2Q8NCW0 462 aa5.36□□□□□ -1.55
LINC00550-201ENST00000629293 ST13P5Q8NFI4 369 aaPredicted RBP5.36□□□□□ -1.55
LINC00550-201ENST00000629293 MAP7D2Q96T17 732 aa5.36□□□□□ -1.55
LINC00550-201ENST00000629293 LZTS2Q9BRK4 669 aa5.36□□□□□ -1.55
LINC00550-201ENST00000629293 GSX2Q9BZM3 304 aa5.36□□□□□ -1.55
LINC00550-201ENST00000629293 CRISPLD1Q9H336 500 aa5.36□□□□□ -1.55
LINC00550-201ENST00000629293 NCOA5Q9HCD5 579 aaKnown RBP5.36□□□□□ -1.55
LINC00550-201ENST00000629293 KANSL3Q9P2N6 904 aa5.36□□□□□ -1.55
LINC00550-201ENST00000629293 PCDHA2Q9Y5H9 948 aa5.36□□□□□ -1.55
LINC00550-201ENST00000629293 DCHS1Q96JQ0 3298 aa5.36□□□□□ -1.55
LINC00550-201ENST00000629293 SMIM35A0A1B0GVV1 85 aa5.36□□□□□ -1.55
LINC00550-201ENST00000629293 GOLGA8AA7E2F4 631 aa5.36□□□□□ -1.55
LINC00550-201ENST00000629293 GOLGA8BA8MQT2 603 aa5.36□□□□□ -1.55
LINC00550-201ENST00000629293 IPO5O00410 1097 aaKnown RBP5.36□□□□□ -1.55
LINC00550-201ENST00000629293 EFSO43281 561 aa5.36□□□□□ -1.55
LINC00550-201ENST00000629293 HBP1O60381 514 aa5.36□□□□□ -1.55
LINC00550-201ENST00000629293 EYA4O95677 639 aa5.36□□□□□ -1.55
LINC00550-201ENST00000629293 PF4P02776 101 aa5.36□□□□□ -1.55
LINC00550-201ENST00000629293 MSX1P28360 303 aa5.36□□□□□ -1.55
LINC00550-201ENST00000629293 AVPR2P30518 371 aa5.36□□□□□ -1.55
LINC00550-201ENST00000629293 LIG3P49916 1009 aa5.36□□□□□ -1.55
LINC00550-201ENST00000629293 SIGLEC14Q08ET2 396 aa5.36□□□□□ -1.55
LINC00550-201ENST00000629293 TCF15Q12870 199 aa5.36□□□□□ -1.55
LINC00550-201ENST00000629293 COL9A2Q14055 689 aaPredicted RBP5.36□□□□□ -1.55
LINC00550-201ENST00000629293 KCNT2Q6UVM3 1135 aa5.36□□□□□ -1.55
LINC00550-201ENST00000629293 TMC5Q6UXY8 1006 aa5.36□□□□□ -1.55
LINC00550-201ENST00000629293 AGMOQ6ZNB7 445 aa5.36□□□□□ -1.55
LINC00550-201ENST00000629293 CCNJLQ8IV13 435 aa5.36□□□□□ -1.55
LINC00550-201ENST00000629293 TMTC2Q8N394 836 aa5.36□□□□□ -1.55
LINC00550-201ENST00000629293 COLGALT1Q8NBJ5 622 aa5.36□□□□□ -1.55
LINC00550-201ENST00000629293 KCNG4Q8TDN1 519 aa5.36□□□□□ -1.55
LINC00550-201ENST00000629293 GJA10Q969M2 543 aa5.36□□□□□ -1.55
LINC00550-201ENST00000629293 SNX27Q96L92 541 aa5.36□□□□□ -1.55
LINC00550-201ENST00000629293 SRPK1Q96SB4 655 aaKnown RBP5.36□□□□□ -1.55
LINC00550-201ENST00000629293 CCDC113Q9H0I3 377 aa5.36□□□□□ -1.55
LINC00550-201ENST00000629293 KCNF1Q9H3M0 494 aa5.36□□□□□ -1.55
LINC00550-201ENST00000629293 CBX8Q9HC52 389 aa5.36□□□□□ -1.55
LINC00550-201ENST00000629293 GABBR1Q9UBS5 961 aa5.36□□□□□ -1.55
LINC00550-201ENST00000629293 FRMPD4Q14CM0 1322 aa5.36□□□□□ -1.55
LINC00550-201ENST00000629293 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP5.36□□□□□ -1.55
LINC00550-201ENST00000629293 ZBTB43O43298 467 aa5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms