RNA–Protein interactions for RNA: ENST00000626716.1

R3HDM4-208, Transcript of R3H domain containing 4, human

TSL 5 BASIC

Gene R3HDM4, Length 138 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
R3HDM4-208	ENST00000626716	CD300LG	Q6UXG3	332 aa		27.73	■■■□□ 2.03
R3HDM4-208	ENST00000626716	FGF13	Q92913	245 aa		27.73	■■■□□ 2.03
R3HDM4-208	ENST00000626716	FGF14	Q92915	247 aa		27.73	■■■□□ 2.03
R3HDM4-208	ENST00000626716	ACO2	Q99798	780 aa	Known RBP	27.73	■■■□□ 2.03
R3HDM4-208	ENST00000626716	SIT1	Q9Y3P8	196 aa		27.73	■■■□□ 2.03
R3HDM4-208	ENST00000626716	BACE2	Q9Y5Z0	518 aa		27.73	■■■□□ 2.03
R3HDM4-208	ENST00000626716	NPTX2	P47972	431 aa		27.72	■■■□□ 2.03
R3HDM4-208	ENST00000626716	YARS	P54577	528 aa	Known RBP	27.72	■■■□□ 2.03
R3HDM4-208	ENST00000626716	ALKAL1	Q6UXT8	129 aa		27.72	■■■□□ 2.03
R3HDM4-208	ENST00000626716	CCDC94	Q9BW85	323 aa	Predicted RBP	27.72	■■■□□ 2.03
R3HDM4-208	ENST00000626716	TMEM134	Q9H6X4	195 aa		27.72	■■■□□ 2.03
R3HDM4-208	ENST00000626716	TOPORS	Q9NS56	1045 aa	Predicted RBP	27.72	■■■□□ 2.03
R3HDM4-208	ENST00000626716	GTF3C3	Q9Y5Q9	886 aa		27.72	■■■□□ 2.03
R3HDM4-208	ENST00000626716	CDY1	Q9Y6F8	540 aa		27.72	■■■□□ 2.03
R3HDM4-208	ENST00000626716	GVINP1	Q7Z2Y8	2422 aa		27.71	■■■□□ 2.03
R3HDM4-208	ENST00000626716	MYH15	Q9Y2K3	1946 aa		27.71	■■■□□ 2.03
R3HDM4-208	ENST00000626716		E9PMD0	336 aa		27.71	■■■□□ 2.03
R3HDM4-208	ENST00000626716	GRM5	P41594	1212 aa		27.71	■■■□□ 2.03
R3HDM4-208	ENST00000626716	GPC5	P78333	572 aa		27.71	■■■□□ 2.03
R3HDM4-208	ENST00000626716	XKR4	Q5GH76	650 aa		27.71	■■■□□ 2.03
R3HDM4-208	ENST00000626716	KRT79	Q5XKE5	535 aa		27.71	■■■□□ 2.03
R3HDM4-208	ENST00000626716	RSPO2	Q6UXX9	243 aa	Predicted RBP	27.71	■■■□□ 2.03
R3HDM4-208	ENST00000626716	ANKS3	Q6ZW76	656 aa		27.71	■■■□□ 2.03
R3HDM4-208	ENST00000626716	MTSS1L	Q765P7	747 aa		27.71	■■■□□ 2.03
R3HDM4-208	ENST00000626716	CEP120	Q8N960	986 aa		27.71	■■■□□ 2.03
R3HDM4-208	ENST00000626716	ITFG1	Q8TB96	612 aa		27.71	■■■□□ 2.03
R3HDM4-208	ENST00000626716	DDX27	Q96GQ7	796 aa	Known RBP	27.71	■■■□□ 2.03
R3HDM4-208	ENST00000626716	NOTCH4	Q99466	2003 aa		27.71	■■■□□ 2.03
R3HDM4-208	ENST00000626716	MRPL4	Q9BYD3	311 aa	Known RBP	27.71	■■■□□ 2.03
R3HDM4-208	ENST00000626716	GOLGA2P5	Q9HBQ8	144 aa		27.71	■■■□□ 2.03
R3HDM4-208	ENST00000626716	PTPRH	Q9HD43	1115 aa		27.71	■■■□□ 2.03
R3HDM4-208	ENST00000626716	PCDHB6	Q9Y5E3	794 aa		27.71	■■■□□ 2.03
R3HDM4-208	ENST00000626716	PHLPP2	Q6ZVD8	1323 aa		27.7	■■■□□ 2.03
R3HDM4-208	ENST00000626716	EP300	Q09472	2414 aa	Predicted RBP	27.7	■■■□□ 2.03
R3HDM4-208	ENST00000626716	HIP1R	O75146	1068 aa		27.7	■■■□□ 2.02
R3HDM4-208	ENST00000626716	DCN	P07585	359 aa	Known RBP	27.7	■■■□□ 2.02
R3HDM4-208	ENST00000626716	TKT	P29401	623 aa	Known RBP	27.7	■■■□□ 2.02
R3HDM4-208	ENST00000626716	DMP1	Q13316	513 aa	Predicted RBP	27.7	■■■□□ 2.02
R3HDM4-208	ENST00000626716	SPECC1	Q5M775	1068 aa		27.7	■■■□□ 2.02
R3HDM4-208	ENST00000626716	DAW1	Q8N136	415 aa		27.7	■■■□□ 2.02
R3HDM4-208	ENST00000626716	ADSSL1	Q8N142	457 aa		27.7	■■■□□ 2.02
R3HDM4-208	ENST00000626716	SHD	Q96IW2	340 aa		27.7	■■■□□ 2.02
R3HDM4-208	ENST00000626716	CDT1	Q9H211	546 aa		27.7	■■■□□ 2.02
R3HDM4-208	ENST00000626716	RBM19	Q9Y4C8	960 aa	Known RBP	27.7	■■■□□ 2.02
R3HDM4-208	ENST00000626716	CACNA1I	Q9P0X4	2223 aa		27.69	■■■□□ 2.02
R3HDM4-208	ENST00000626716	LAD1	O00515	517 aa		27.69	■■■□□ 2.02
R3HDM4-208	ENST00000626716	BRCC3	P46736	316 aa		27.69	■■■□□ 2.02
R3HDM4-208	ENST00000626716	STARD6	P59095	220 aa		27.69	■■■□□ 2.02
R3HDM4-208	ENST00000626716	OSTN	P61366	133 aa		27.69	■■■□□ 2.02
R3HDM4-208	ENST00000626716	ZNF568	Q3ZCX4	644 aa		27.69	■■■□□ 2.02
R3HDM4-208	ENST00000626716	C3orf58	Q8NDZ4	430 aa		27.69	■■■□□ 2.02
R3HDM4-208	ENST00000626716	DRC1	Q96MC2	740 aa		27.69	■■■□□ 2.02
R3HDM4-208	ENST00000626716	KMT5A	Q9NQR1	393 aa		27.69	■■■□□ 2.02
R3HDM4-208	ENST00000626716	SLC38A7	Q9NVC3	462 aa		27.69	■■■□□ 2.02
R3HDM4-208	ENST00000626716	HCFC1R1	Q9NWW0	138 aa		27.69	■■■□□ 2.02
R3HDM4-208	ENST00000626716	DLGAP2	Q9P1A6	1054 aa		27.69	■■■□□ 2.02
R3HDM4-208	ENST00000626716	ARHGAP28	Q9P2N2	729 aa		27.69	■■■□□ 2.02
R3HDM4-208	ENST00000626716	DNMT3B	Q9UBC3	853 aa	Known RBP	27.69	■■■□□ 2.02
R3HDM4-208	ENST00000626716	KCNH3	Q9ULD8	1083 aa		27.69	■■■□□ 2.02
R3HDM4-208	ENST00000626716	PP2D1	A8MPX8	630 aa		27.68	■■■□□ 2.02
R3HDM4-208	ENST00000626716		I3L4J1	428 aa		27.68	■■■□□ 2.02
R3HDM4-208	ENST00000626716	SOX4	Q06945	474 aa	Predicted RBP	27.68	■■■□□ 2.02
R3HDM4-208	ENST00000626716	PABPC1L	Q4VXU2	614 aa	Known RBP	27.68	■■■□□ 2.02
R3HDM4-208	ENST00000626716	RINT1	Q6NUQ1	792 aa		27.68	■■■□□ 2.02
R3HDM4-208	ENST00000626716	DTHD1	Q6ZMT9	781 aa		27.68	■■■□□ 2.02
R3HDM4-208	ENST00000626716	TAS1R3	Q7RTX0	852 aa		27.68	■■■□□ 2.02
R3HDM4-208	ENST00000626716	TCHP	Q9BT92	498 aa		27.68	■■■□□ 2.02
R3HDM4-208	ENST00000626716	TARS2	Q9BW92	718 aa	Known RBP	27.68	■■■□□ 2.02
R3HDM4-208	ENST00000626716	SEMA4A	Q9H3S1	761 aa		27.68	■■■□□ 2.02
R3HDM4-208	ENST00000626716	C17orf75	Q9HAS0	396 aa		27.68	■■■□□ 2.02
R3HDM4-208	ENST00000626716	CIT	O14578	2027 aa		27.68	■■■□□ 2.02
R3HDM4-208	ENST00000626716	CDC25A	P30304	524 aa		27.67	■■■□□ 2.02
R3HDM4-208	ENST00000626716	PRPH	P41219	470 aa		27.67	■■■□□ 2.02
R3HDM4-208	ENST00000626716	IL17A	Q16552	155 aa		27.67	■■■□□ 2.02
R3HDM4-208	ENST00000626716	C1orf186	Q6ZWK4	172 aa		27.67	■■■□□ 2.02
R3HDM4-208	ENST00000626716	SNX27	Q96L92	541 aa		27.67	■■■□□ 2.02
R3HDM4-208	ENST00000626716	ZMAT2	Q96NC0	199 aa	Known RBP	27.67	■■■□□ 2.02
R3HDM4-208	ENST00000626716	ACAP3	Q96P50	834 aa		27.67	■■■□□ 2.02
R3HDM4-208	ENST00000626716	KIF2C	Q99661	725 aa		27.67	■■■□□ 2.02
R3HDM4-208	ENST00000626716	RUSC1	Q9BVN2	902 aa		27.67	■■■□□ 2.02
R3HDM4-208	ENST00000626716	MCF2	P10911	925 aa		27.66	■■■□□ 2.02
R3HDM4-208	ENST00000626716	PJA1	Q8NG27	643 aa		27.66	■■■□□ 2.02
R3HDM4-208	ENST00000626716	ZNF461	Q8TAF7	563 aa		27.66	■■■□□ 2.02
R3HDM4-208	ENST00000626716	NTPCR	Q9BSD7	190 aa	Known RBP	27.66	■■■□□ 2.02
R3HDM4-208	ENST00000626716	FOXQ1	Q9C009	403 aa		27.66	■■■□□ 2.02
R3HDM4-208	ENST00000626716	ZNF292	O60281	2723 aa		27.65	■■■□□ 2.02
R3HDM4-208	ENST00000626716	PODXL	O00592	558 aa		27.65	■■■□□ 2.02
R3HDM4-208	ENST00000626716	KCNE1	P15382	129 aa		27.65	■■■□□ 2.02
R3HDM4-208	ENST00000626716	PROZ	P22891	400 aa		27.65	■■■□□ 2.02
R3HDM4-208	ENST00000626716	MAPK7	Q13164	816 aa		27.65	■■■□□ 2.02
R3HDM4-208	ENST00000626716	SNW1	Q13573	536 aa	Known RBP	27.65	■■■□□ 2.02
R3HDM4-208	ENST00000626716	SLC44A4	Q53GD3	710 aa		27.65	■■■□□ 2.02
R3HDM4-208	ENST00000626716	SLC8B1	Q6J4K2	584 aa		27.65	■■■□□ 2.02
R3HDM4-208	ENST00000626716	C1orf210	Q8IVY1	113 aa		27.65	■■■□□ 2.02
R3HDM4-208	ENST00000626716	NPAS3	Q8IXF0	933 aa		27.65	■■■□□ 2.02
R3HDM4-208	ENST00000626716	MMTAG2	Q9BU76	263 aa	Known RBP	27.65	■■■□□ 2.02
R3HDM4-208	ENST00000626716	TIPIN	Q9BVW5	301 aa		27.65	■■■□□ 2.02
R3HDM4-208	ENST00000626716	MRPS23	Q9Y3D9	190 aa	Known RBP	27.65	■■■□□ 2.02
R3HDM4-208	ENST00000626716	SFI1	A8K8P3	1242 aa		27.64	■■■□□ 2.02
R3HDM4-208	ENST00000626716	SLC16A4	O15374	487 aa		27.64	■■■□□ 2.02

Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms