RNA–Protein interactions for RNA: ENST00000625216.2

PNKP-217, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 629 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-217ENST00000625216 GOLGA6L3A6NEY3 463 aa13.82□□□□□ -0.2
PNKP-217ENST00000625216 TADA2AO75478 443 aa13.82□□□□□ -0.2
PNKP-217ENST00000625216 RECQL4O94761 1208 aa13.82□□□□□ -0.2
PNKP-217ENST00000625216 SMC2O95347 1197 aa13.82□□□□□ -0.2
PNKP-217ENST00000625216 RPN1P04843 607 aaKnown RBP13.82□□□□□ -0.2
PNKP-217ENST00000625216 SSBP05455 408 aaKnown RBP eCLIP13.82□□□□□ -0.2
PNKP-217ENST00000625216 ADH1AP07327 375 aa13.82□□□□□ -0.2
PNKP-217ENST00000625216 CNPP09543 421 aaKnown RBP13.82□□□□□ -0.2
PNKP-217ENST00000625216 PLS3P13797 630 aa13.82□□□□□ -0.2
PNKP-217ENST00000625216 COL9A1P20849 921 aa13.82□□□□□ -0.2
PNKP-217ENST00000625216 SCP2P22307 547 aa13.82□□□□□ -0.2
PNKP-217ENST00000625216 GLUD2P49448 558 aa13.82□□□□□ -0.2
PNKP-217ENST00000625216 SLC12A3P55017 1021 aa13.82□□□□□ -0.2
PNKP-217ENST00000625216 DSG1Q02413 1049 aa13.82□□□□□ -0.2
PNKP-217ENST00000625216 MORC3Q14149 939 aa13.82□□□□□ -0.2
PNKP-217ENST00000625216 USP41Q3LFD5 358 aa13.82□□□□□ -0.2
PNKP-217ENST00000625216 ATAT1Q5SQI0 421 aa13.82□□□□□ -0.2
PNKP-217ENST00000625216 KIAA0319Q5VV43 1072 aa13.82□□□□□ -0.2
PNKP-217ENST00000625216 EEF1DP3Q658K8 133 aa13.82□□□□□ -0.2
PNKP-217ENST00000625216 KIAA1841Q6NSI8 718 aa13.82□□□□□ -0.2
PNKP-217ENST00000625216 ELMSAN1Q6PJG2 1045 aa13.82□□□□□ -0.2
PNKP-217ENST00000625216 SV2BQ7L1I2 683 aa13.82□□□□□ -0.2
PNKP-217ENST00000625216 FBXL18Q96ME1 805 aa13.82□□□□□ -0.2
PNKP-217ENST00000625216 ACO2Q99798 780 aaKnown RBP13.82□□□□□ -0.2
PNKP-217ENST00000625216 C7orf25Q9BPX7 421 aa13.82□□□□□ -0.2
PNKP-217ENST00000625216 PTPRHQ9HD43 1115 aa13.82□□□□□ -0.2
PNKP-217ENST00000625216 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.82□□□□□ -0.2
PNKP-217ENST00000625216 ANO10Q9NW15 660 aa13.82□□□□□ -0.2
PNKP-217ENST00000625216 LARSQ9P2J5 1176 aaKnown RBP13.82□□□□□ -0.2
PNKP-217ENST00000625216 ADAM28Q9UKQ2 775 aa13.82□□□□□ -0.2
PNKP-217ENST00000625216 USP20Q9Y2K6 914 aa13.82□□□□□ -0.2
PNKP-217ENST00000625216 SFI1A8K8P3 1242 aa13.81□□□□□ -0.2
PNKP-217ENST00000625216 PRR33A8MZF0 331 aa13.81□□□□□ -0.2
PNKP-217ENST00000625216 H0YCG3 227 aa13.81□□□□□ -0.2
PNKP-217ENST00000625216 EDN1P05305 212 aa13.81□□□□□ -0.2
PNKP-217ENST00000625216 MYL1P05976 194 aa13.81□□□□□ -0.2
PNKP-217ENST00000625216 EPCAMP16422 314 aa13.81□□□□□ -0.2
PNKP-217ENST00000625216 CLCN4P51793 760 aa13.81□□□□□ -0.2
PNKP-217ENST00000625216 ASIC1P78348 528 aa13.81□□□□□ -0.2
PNKP-217ENST00000625216 CREMQ03060 361 aa13.81□□□□□ -0.2
PNKP-217ENST00000625216 STRN3Q13033 797 aa13.81□□□□□ -0.2
PNKP-217ENST00000625216 HSP90AA2PQ14568 343 aaPredicted RBP13.81□□□□□ -0.2
PNKP-217ENST00000625216 FUT10Q6P4F1 479 aa13.81□□□□□ -0.2
PNKP-217ENST00000625216 CNNM4Q6P4Q7 775 aa13.81□□□□□ -0.2
PNKP-217ENST00000625216 TAS1R1Q7RTX1 841 aa13.81□□□□□ -0.2
PNKP-217ENST00000625216 GPBP1Q86WP2 473 aa13.81□□□□□ -0.2
PNKP-217ENST00000625216 TRIML1Q8N9V2 468 aa13.81□□□□□ -0.2
PNKP-217ENST00000625216 RNF214Q8ND24 703 aa13.81□□□□□ -0.2
PNKP-217ENST00000625216 HDAC7Q8WUI4 952 aa13.81□□□□□ -0.2
PNKP-217ENST00000625216 KCNN1Q92952 543 aa13.81□□□□□ -0.2
PNKP-217ENST00000625216 RPGRIP1Q96KN7 1286 aa13.81□□□□□ -0.2
PNKP-217ENST00000625216 GSDMAQ96QA5 445 aa13.81□□□□□ -0.2
PNKP-217ENST00000625216 CCDC94Q9BW85 323 aaPredicted RBP13.81□□□□□ -0.2
PNKP-217ENST00000625216 C11orf16Q9NQ32 467 aa13.81□□□□□ -0.2
PNKP-217ENST00000625216 TOPORSQ9NS56 1045 aaPredicted RBP13.81□□□□□ -0.2
PNKP-217ENST00000625216 FNIP2Q9P278 1114 aa13.81□□□□□ -0.2
PNKP-217ENST00000625216 ODF2LQ9ULJ1 636 aa13.81□□□□□ -0.2
PNKP-217ENST00000625216 NR2E1Q9Y466 385 aa13.81□□□□□ -0.2
PNKP-217ENST00000625216 SF3B1O75533 1304 aaKnown RBP eCLIP13.81□□□□□ -0.2
PNKP-217ENST00000625216 C2CD2LO14523 706 aa13.8□□□□□ -0.2
PNKP-217ENST00000625216 PTGESO14684 152 aa13.8□□□□□ -0.2
PNKP-217ENST00000625216 SLC16A4O15374 487 aa13.8□□□□□ -0.2
PNKP-217ENST00000625216 MCF2P10911 925 aa13.8□□□□□ -0.2
PNKP-217ENST00000625216 GRM5P41594 1212 aa13.8□□□□□ -0.2
PNKP-217ENST00000625216 YARSP54577 528 aaKnown RBP13.8□□□□□ -0.2
PNKP-217ENST00000625216 ELAVL2Q12926 359 aaKnown RBP13.8□□□□□ -0.2
PNKP-217ENST00000625216 KMT5BQ4FZB7 885 aa13.8□□□□□ -0.2
PNKP-217ENST00000625216 CYP26C1Q6V0L0 522 aa13.8□□□□□ -0.2
PNKP-217ENST00000625216 ZPBP2Q6X784 338 aa13.8□□□□□ -0.2
PNKP-217ENST00000625216 TMEM161BQ8NDZ6 487 aa13.8□□□□□ -0.2
PNKP-217ENST00000625216 DDX12PQ92771 950 aa13.8□□□□□ -0.2
PNKP-217ENST00000625216 DNAJC19Q96DA6 116 aa13.8□□□□□ -0.2
PNKP-217ENST00000625216 UROC1Q96N76 676 aa13.8□□□□□ -0.2
PNKP-217ENST00000625216 TCHPQ9BT92 498 aa13.8□□□□□ -0.2
PNKP-217ENST00000625216 TARS2Q9BW92 718 aaKnown RBP13.8□□□□□ -0.2
PNKP-217ENST00000625216 APOL5Q9BWW9 433 aa13.8□□□□□ -0.2
PNKP-217ENST00000625216 GPR62Q9BZJ7 368 aa13.8□□□□□ -0.2
PNKP-217ENST00000625216 SFXN1Q9H9B4 322 aa13.8□□□□□ -0.2
PNKP-217ENST00000625216 CBX8Q9HC52 389 aa13.8□□□□□ -0.2
PNKP-217ENST00000625216 GDAQ9Y2T3 454 aa13.8□□□□□ -0.2
PNKP-217ENST00000625216 ARIH1Q9Y4X5 557 aaPredicted RBP13.8□□□□□ -0.2
PNKP-217ENST00000625216 NPHP3-ACAD11A0A0J9YXS1 232 aa13.79□□□□□ -0.2
PNKP-217ENST00000625216 TEX28O15482 410 aa13.79□□□□□ -0.2
PNKP-217ENST00000625216 TOM1L1O75674 476 aa13.79□□□□□ -0.2
PNKP-217ENST00000625216 PROZP22891 400 aa13.79□□□□□ -0.2
PNKP-217ENST00000625216 ABCD1P33897 745 aa13.79□□□□□ -0.2
PNKP-217ENST00000625216 AMPD3Q01432 767 aa13.79□□□□□ -0.2
PNKP-217ENST00000625216 KCNB1Q14721 858 aa13.79□□□□□ -0.2
PNKP-217ENST00000625216 NAB2Q15742 525 aa13.79□□□□□ -0.2
PNKP-217ENST00000625216 ZNF568Q3ZCX4 644 aa13.79□□□□□ -0.2
PNKP-217ENST00000625216 ARSHQ5FYA8 562 aa13.79□□□□□ -0.2
PNKP-217ENST00000625216 XKR4Q5GH76 650 aa13.79□□□□□ -0.2
PNKP-217ENST00000625216 RARS2Q5T160 578 aaKnown RBP13.79□□□□□ -0.2
PNKP-217ENST00000625216 PDXDC1Q6P996 788 aa13.79□□□□□ -0.2
PNKP-217ENST00000625216 DCLRE1AQ6PJP8 1040 aa13.79□□□□□ -0.2
PNKP-217ENST00000625216 MPZL3Q6UWV2 235 aa13.79□□□□□ -0.2
PNKP-217ENST00000625216 C15orf39Q6ZRI6 1047 aa13.79□□□□□ -0.2
PNKP-217ENST00000625216 DYMQ7RTS9 669 aa13.79□□□□□ -0.2
PNKP-217ENST00000625216 TAS1R3Q7RTX0 852 aa13.79□□□□□ -0.2
PNKP-217ENST00000625216 GPR149Q86SP6 731 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms