RNA–Protein interactions for RNA: ENST00000624277.3

CCDC187-204, Transcript of coiled-coil domain containing 187, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CCDC187, Length 3,918 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187-204ENST00000624277 DCDC2CA8MYV0 355 aa13.88□□□□□ -0.19
CCDC187-204ENST00000624277 TJP3O95049 919 aa13.88□□□□□ -0.19
CCDC187-204ENST00000624277 NCF2P19878 526 aaPredicted RBP13.88□□□□□ -0.19
CCDC187-204ENST00000624277 HMGB2P26583 209 aaKnown RBP13.88□□□□□ -0.19
CCDC187-204ENST00000624277 EPHB1P54762 984 aa13.88□□□□□ -0.19
CCDC187-204ENST00000624277 DDR1Q08345 913 aa13.88□□□□□ -0.19
CCDC187-204ENST00000624277 ZNF568Q3ZCX4 644 aa13.88□□□□□ -0.19
CCDC187-204ENST00000624277 DCAF15Q66K64 600 aa13.88□□□□□ -0.19
CCDC187-204ENST00000624277 HHIPL2Q6UWX4 724 aa13.88□□□□□ -0.19
CCDC187-204ENST00000624277 PALB2Q86YC2 1186 aa13.88□□□□□ -0.19
CCDC187-204ENST00000624277 LRRC15Q8TF66 581 aa13.88□□□□□ -0.19
CCDC187-204ENST00000624277 TTC1Q99614 292 aa13.88□□□□□ -0.19
CCDC187-204ENST00000624277 PABPC3Q9H361 631 aaKnown RBP13.88□□□□□ -0.19
CCDC187-204ENST00000624277 TMBIM4Q9HC24 238 aa13.88□□□□□ -0.19
CCDC187-204ENST00000624277 RNF19AQ9NV58 838 aa13.88□□□□□ -0.19
CCDC187-204ENST00000624277 CFLARO15519 480 aa13.88□□□□□ -0.19
CCDC187-204ENST00000624277 HLA-DRAP01903 254 aa13.88□□□□□ -0.19
CCDC187-204ENST00000624277 DHX34Q14147 1143 aaKnown RBP13.88□□□□□ -0.19
CCDC187-204ENST00000624277 TMCO4Q5TGY1 634 aa13.88□□□□□ -0.19
CCDC187-204ENST00000624277 RHOT1Q8IXI2 618 aa13.88□□□□□ -0.19
CCDC187-204ENST00000624277 BBOF1Q8ND07 529 aa13.88□□□□□ -0.19
CCDC187-204ENST00000624277 SNF8Q96H20 258 aa13.88□□□□□ -0.19
CCDC187-204ENST00000624277 ANKRD36BP1Q96IX9 119 aa13.88□□□□□ -0.19
CCDC187-204ENST00000624277 RAB3IPQ96QF0 476 aaPredicted RBP13.88□□□□□ -0.19
CCDC187-204ENST00000624277 MED10Q9BTT4 135 aa13.88□□□□□ -0.19
CCDC187-204ENST00000624277 CYP4F11Q9HBI6 524 aa13.88□□□□□ -0.19
CCDC187-204ENST00000624277 ZNF70Q9UC06 446 aaPredicted RBP13.88□□□□□ -0.19
CCDC187-204ENST00000624277 SLIT2O94813 1529 aa13.88□□□□□ -0.19
CCDC187-204ENST00000624277 PRPSAP2O60256 369 aa13.88□□□□□ -0.19
CCDC187-204ENST00000624277 ZBED1O96006 694 aa13.88□□□□□ -0.19
CCDC187-204ENST00000624277 CPP00450 1065 aa13.88□□□□□ -0.19
CCDC187-204ENST00000624277 COILP38432 576 aaPredicted RBP13.88□□□□□ -0.19
CCDC187-204ENST00000624277 POLE2P56282 527 aa13.88□□□□□ -0.19
CCDC187-204ENST00000624277 SLC8A3P57103 927 aa13.88□□□□□ -0.19
CCDC187-204ENST00000624277 TRPM8Q7Z2W7 1104 aa13.88□□□□□ -0.19
CCDC187-204ENST00000624277 ARMC9Q7Z3E5 817 aa13.88□□□□□ -0.19
CCDC187-204ENST00000624277 AMIGO3Q86WK7 504 aa13.88□□□□□ -0.19
CCDC187-204ENST00000624277 GPD1LQ8N335 351 aa13.88□□□□□ -0.19
CCDC187-204ENST00000624277 MXRA8Q9BRK3 442 aa13.88□□□□□ -0.19
CCDC187-204ENST00000624277 CARD9Q9H257 536 aa13.88□□□□□ -0.19
CCDC187-204ENST00000624277 LRRC4BQ9NT99 713 aa13.88□□□□□ -0.19
CCDC187-204ENST00000624277 PRLRP16471 622 aa13.87□□□□□ -0.19
CCDC187-204ENST00000624277 CA8P35219 290 aa13.87□□□□□ -0.19
CCDC187-204ENST00000624277 CDK17Q00537 523 aa13.87□□□□□ -0.19
CCDC187-204ENST00000624277 ARSHQ5FYA8 562 aa13.87□□□□□ -0.19
CCDC187-204ENST00000624277 ZNF667Q5HYK9 610 aa13.87□□□□□ -0.19
CCDC187-204ENST00000624277 KDM7AQ6ZMT4 941 aa13.87□□□□□ -0.19
CCDC187-204ENST00000624277 SPATA21Q7Z572 469 aa13.87□□□□□ -0.19
CCDC187-204ENST00000624277 NSUN6Q8TEA1 469 aaKnown RBP13.87□□□□□ -0.19
CCDC187-204ENST00000624277 NLRP7Q8WX94 980 aa13.87□□□□□ -0.19
CCDC187-204ENST00000624277 SREK1Q8WXA9 508 aaKnown RBP13.87□□□□□ -0.19
CCDC187-204ENST00000624277 SCYL1Q96KG9 808 aa13.87□□□□□ -0.19
CCDC187-204ENST00000624277 TRABDQ9H4I3 376 aa13.87□□□□□ -0.19
CCDC187-204ENST00000624277 AS3MTQ9HBK9 375 aa13.87□□□□□ -0.19
CCDC187-204ENST00000624277 FAM53CQ9NYF3 392 aa13.87□□□□□ -0.19
CCDC187-204ENST00000624277 AIPL1Q9NZN9 384 aa13.87□□□□□ -0.19
CCDC187-204ENST00000624277 DDX20Q9UHI6 824 aaKnown RBP13.87□□□□□ -0.19
CCDC187-204ENST00000624277 FEM1BQ9UK73 627 aa13.87□□□□□ -0.19
CCDC187-204ENST00000624277 USH1CQ9Y6N9 552 aa13.87□□□□□ -0.19
CCDC187-204ENST00000624277 CNTNAP4Q9C0A0 1308 aa13.87□□□□□ -0.19
CCDC187-204ENST00000624277 MEIS2O14770 477 aa13.87□□□□□ -0.19
CCDC187-204ENST00000624277 BRD2P25440 801 aaKnown RBP13.87□□□□□ -0.19
CCDC187-204ENST00000624277 LMNB2Q03252 620 aa13.87□□□□□ -0.19
CCDC187-204ENST00000624277 PPP3CAQ08209 521 aa13.87□□□□□ -0.19
CCDC187-204ENST00000624277 MAP7D1Q3KQU3 841 aa13.87□□□□□ -0.19
CCDC187-204ENST00000624277 PCGF5Q86SE9 256 aa13.87□□□□□ -0.19
CCDC187-204ENST00000624277 NT5DC3Q86UY8 548 aa13.87□□□□□ -0.19
CCDC187-204ENST00000624277 OR6B3Q8NGW1 331 aa13.87□□□□□ -0.19
CCDC187-204ENST00000624277 ATL2Q8NHH9 583 aa13.87□□□□□ -0.19
CCDC187-204ENST00000624277 ADPGKQ9BRR6 497 aa13.87□□□□□ -0.19
CCDC187-204ENST00000624277 CHMP2BQ9UQN3 213 aa13.87□□□□□ -0.19
CCDC187-204ENST00000624277 NEU2Q9Y3R4 380 aa13.87□□□□□ -0.19
CCDC187-204ENST00000624277 PRRC2BQ5JSZ5 2229 aaKnown RBP13.87□□□□□ -0.19
CCDC187-204ENST00000624277 CHD4Q14839 1912 aa13.87□□□□□ -0.19
CCDC187-204ENST00000624277 A6NJR5 290 aa13.87□□□□□ -0.19
CCDC187-204ENST00000624277 ATXN3P54252 364 aaPredicted RBP13.87□□□□□ -0.19
CCDC187-204ENST00000624277 TMEM62Q0P6H9 643 aa13.87□□□□□ -0.19
CCDC187-204ENST00000624277 MAPK6Q16659 721 aa13.87□□□□□ -0.19
CCDC187-204ENST00000624277 FAM102AQ5T9C2 384 aaPredicted RBP13.87□□□□□ -0.19
CCDC187-204ENST00000624277 SV2AQ7L0J3 742 aa13.87□□□□□ -0.19
CCDC187-204ENST00000624277 MCPH1Q8NEM0 835 aa13.87□□□□□ -0.19
CCDC187-204ENST00000624277 ZSWIM1Q9BR11 485 aa13.87□□□□□ -0.19
CCDC187-204ENST00000624277 CDC42EP4Q9H3Q1 356 aaKnown RBP13.87□□□□□ -0.19
CCDC187-204ENST00000624277 UBE4BO95155 1302 aa13.87□□□□□ -0.19
CCDC187-204ENST00000624277 IGF2BP3O00425 579 aaKnown RBP eCLIP13.86□□□□□ -0.19
CCDC187-204ENST00000624277 MAPK13O15264 365 aa13.86□□□□□ -0.19
CCDC187-204ENST00000624277 GYG2O15488 501 aa13.86□□□□□ -0.19
CCDC187-204ENST00000624277 SMIM24O75264 130 aa13.86□□□□□ -0.19
CCDC187-204ENST00000624277 ADRA2BP18089 450 aa13.86□□□□□ -0.19
CCDC187-204ENST00000624277 SREBF1P36956 1147 aa13.86□□□□□ -0.19
CCDC187-204ENST00000624277 RPL21P46778 160 aaKnown RBP13.86□□□□□ -0.19
CCDC187-204ENST00000624277 GCLCP48506 637 aaPredicted RBP13.86□□□□□ -0.19
CCDC187-204ENST00000624277 CDH6P55285 790 aa13.86□□□□□ -0.19
CCDC187-204ENST00000624277 KRT76Q01546 638 aa13.86□□□□□ -0.19
CCDC187-204ENST00000624277 KDSRQ06136 332 aa13.86□□□□□ -0.19
CCDC187-204ENST00000624277 TMEM119Q4V9L6 283 aa13.86□□□□□ -0.19
CCDC187-204ENST00000624277 COL23A1Q86Y22 540 aaPredicted RBP13.86□□□□□ -0.19
CCDC187-204ENST00000624277 RBBP8NLQ8NC74 664 aaPredicted RBP13.86□□□□□ -0.19
CCDC187-204ENST00000624277 ZSWIM2Q8NEG5 633 aa13.86□□□□□ -0.19
CCDC187-204ENST00000624277 RBM46Q8TBY0 533 aaKnown RBP13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms