RNA–Protein interactions for RNA: ENST00000623007.3

LDB3-208, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,664 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-208ENST00000623007 NRCAMQ92823 1304 aa17.56■□□□□ 0.4
LDB3-208ENST00000623007 SRGAP2O75044 1071 aa17.55■□□□□ 0.4
LDB3-208ENST00000623007 FTLP02792 175 aaPredicted RBP17.55■□□□□ 0.4
LDB3-208ENST00000623007 CPT1AP50416 773 aa17.55■□□□□ 0.4
LDB3-208ENST00000623007 GPIHBP1Q8IV16 184 aa17.55■□□□□ 0.4
LDB3-208ENST00000623007 ACTRT1Q8TDG2 376 aa17.55■□□□□ 0.4
LDB3-208ENST00000623007 ADPGKQ9BRR6 497 aa17.55■□□□□ 0.4
LDB3-208ENST00000623007 KATNAL1Q9BW62 490 aa17.55■□□□□ 0.4
LDB3-208ENST00000623007 HAPLN2Q9GZV7 340 aa17.55■□□□□ 0.4
LDB3-208ENST00000623007 ASB7Q9H672 318 aa17.55■□□□□ 0.4
LDB3-208ENST00000623007 ANKZF1Q9H8Y5 726 aa17.55■□□□□ 0.4
LDB3-208ENST00000623007 RPF1Q9H9Y2 349 aaKnown RBP17.55■□□□□ 0.4
LDB3-208ENST00000623007 GTF3C4Q9UKN8 822 aa17.55■□□□□ 0.4
LDB3-208ENST00000623007 AKT3Q9Y243 479 aa17.55■□□□□ 0.4
LDB3-208ENST00000623007 ABLIM1O14639 778 aa17.55■□□□□ 0.4
LDB3-208ENST00000623007 SLC10A3P09131 477 aa17.55■□□□□ 0.4
LDB3-208ENST00000623007 CLTAP09496 248 aa17.55■□□□□ 0.4
LDB3-208ENST00000623007 KRT5P13647 590 aa17.55■□□□□ 0.4
LDB3-208ENST00000623007 ZSCAN20P17040 1043 aaPredicted RBP17.55■□□□□ 0.4
LDB3-208ENST00000623007 CLCN3P51790 818 aa17.55■□□□□ 0.4
LDB3-208ENST00000623007 NOP14P78316 857 aaKnown RBP17.55■□□□□ 0.4
LDB3-208ENST00000623007 TRPC3Q13507 836 aa17.55■□□□□ 0.4
LDB3-208ENST00000623007 NFRKBQ6P4R8 1299 aa17.55■□□□□ 0.4
LDB3-208ENST00000623007 NOP9Q86U38 636 aaKnown RBP17.55■□□□□ 0.4
LDB3-208ENST00000623007 VCPIP1Q96JH7 1222 aa17.55■□□□□ 0.4
LDB3-208ENST00000623007 HHIPL1Q96JK4 782 aa17.55■□□□□ 0.4
LDB3-208ENST00000623007 RPS6KC1Q96S38 1066 aa17.55■□□□□ 0.4
LDB3-208ENST00000623007 CCDC188H7C350 402 aa17.54■□□□□ 0.4
LDB3-208ENST00000623007 KPNA6O60684 536 aa17.54■□□□□ 0.4
LDB3-208ENST00000623007 SGPL1O95470 568 aa17.54■□□□□ 0.4
LDB3-208ENST00000623007 ASS1P00966 412 aaKnown RBP17.54■□□□□ 0.4
LDB3-208ENST00000623007 TMEM191BP0C7N4 346 aa17.54■□□□□ 0.4
LDB3-208ENST00000623007 TNNC1P63316 161 aa17.54■□□□□ 0.4
LDB3-208ENST00000623007 FMO1Q01740 532 aa17.54■□□□□ 0.4
LDB3-208ENST00000623007 GPS2Q13227 327 aa17.54■□□□□ 0.4
LDB3-208ENST00000623007 GRIK4Q16099 956 aa17.54■□□□□ 0.4
LDB3-208ENST00000623007 ACAD10Q6JQN1 1059 aa17.54■□□□□ 0.4
LDB3-208ENST00000623007 CC2D1AQ6P1N0 951 aaPredicted RBP17.54■□□□□ 0.4
LDB3-208ENST00000623007 C17orf99Q6UX52 265 aa17.54■□□□□ 0.4
LDB3-208ENST00000623007 SAPCD2Q86UD0 394 aa17.54■□□□□ 0.4
LDB3-208ENST00000623007 IFNL1Q8IU54 200 aa17.54■□□□□ 0.4
LDB3-208ENST00000623007 TTC39CQ8N584 583 aa17.54■□□□□ 0.4
LDB3-208ENST00000623007 NPLOC4Q8TAT6 608 aa17.54■□□□□ 0.4
LDB3-208ENST00000623007 APBA2Q99767 749 aa17.54■□□□□ 0.4
LDB3-208ENST00000623007 ACBD3Q9H3P7 528 aa17.54■□□□□ 0.4
LDB3-208ENST00000623007 IFT122Q9HBG6 1241 aa17.54■□□□□ 0.4
LDB3-208ENST00000623007 ABCB6Q9NP58 842 aa17.54■□□□□ 0.4
LDB3-208ENST00000623007 TTC7AQ9ULT0 858 aaPredicted RBP17.54■□□□□ 0.4
LDB3-208ENST00000623007 ERLIN2O94905 339 aa17.53■□□□□ 0.4
LDB3-208ENST00000623007 FTCDO95954 541 aa17.53■□□□□ 0.4
LDB3-208ENST00000623007 NT5DC3Q86UY8 548 aa17.53■□□□□ 0.4
LDB3-208ENST00000623007 SLC47A2Q86VL8 602 aa17.53■□□□□ 0.4
LDB3-208ENST00000623007 UBL4BQ8N7F7 174 aa17.53■□□□□ 0.4
LDB3-208ENST00000623007 COG1Q8WTW3 980 aa17.53■□□□□ 0.4
LDB3-208ENST00000623007 TATDN2Q93075 761 aa17.53■□□□□ 0.4
LDB3-208ENST00000623007 HES6Q96HZ4 224 aa17.53■□□□□ 0.4
LDB3-208ENST00000623007 PLVAPQ9BX97 442 aa17.53■□□□□ 0.4
LDB3-208ENST00000623007 CARD9Q9H257 536 aa17.53■□□□□ 0.4
LDB3-208ENST00000623007 AVENQ9NQS1 362 aaPredicted RBP17.53■□□□□ 0.4
LDB3-208ENST00000623007 CTTNBP2NLQ9P2B4 639 aa17.53■□□□□ 0.4
LDB3-208ENST00000623007 CPA4Q9UI42 421 aa17.53■□□□□ 0.4
LDB3-208ENST00000623007 STXBP5LQ9Y2K9 1186 aa17.53■□□□□ 0.4
LDB3-208ENST00000623007 TMCO5BA8MYB1 307 aa17.52■□□□□ 0.4
LDB3-208ENST00000623007 TULP1O00294 542 aaPredicted RBP17.52■□□□□ 0.4
LDB3-208ENST00000623007 ZNF185O15231 689 aa17.52■□□□□ 0.4
LDB3-208ENST00000623007 ZRANB2O95218 330 aaKnown RBP eCLIP17.52■□□□□ 0.4
LDB3-208ENST00000623007 VNN1O95497 513 aa17.52■□□□□ 0.4
LDB3-208ENST00000623007 ALDH1A1P00352 501 aa17.52■□□□□ 0.4
LDB3-208ENST00000623007 F2P00734 622 aa17.52■□□□□ 0.4
LDB3-208ENST00000623007 CYP1A2P05177 515 aa17.52■□□□□ 0.4
LDB3-208ENST00000623007 RPLP2P05387 115 aaKnown RBP17.52■□□□□ 0.4
LDB3-208ENST00000623007 P4HA1P13674 534 aa17.52■□□□□ 0.4
LDB3-208ENST00000623007 HSPA6P17066 643 aa17.52■□□□□ 0.4
LDB3-208ENST00000623007 ABCB4P21439 1286 aa17.52■□□□□ 0.4
LDB3-208ENST00000623007 ATICP31939 592 aa17.52■□□□□ 0.4
LDB3-208ENST00000623007 IGBP1P78318 339 aa17.52■□□□□ 0.4
LDB3-208ENST00000623007 CLEC16AQ2KHT3 1053 aa17.52■□□□□ 0.4
LDB3-208ENST00000623007 DCAF4L1Q3SXM0 396 aa17.52■□□□□ 0.4
LDB3-208ENST00000623007 ZBTB33Q86T24 672 aa17.52■□□□□ 0.4
LDB3-208ENST00000623007 NOA1Q8NC60 698 aaKnown RBP17.52■□□□□ 0.4
LDB3-208ENST00000623007 SLC20A1Q8WUM9 679 aa17.52■□□□□ 0.4
LDB3-208ENST00000623007 TRAPPC12Q8WVT3 735 aa17.52■□□□□ 0.4
LDB3-208ENST00000623007 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP17.52■□□□□ 0.4
LDB3-208ENST00000623007 DDX1Q92499 740 aaKnown RBP17.52■□□□□ 0.4
LDB3-208ENST00000623007 USP6NLQ92738 828 aa17.52■□□□□ 0.4
LDB3-208ENST00000623007 KAT5Q92993 513 aa17.52■□□□□ 0.4
LDB3-208ENST00000623007 TSPAN18Q96SJ8 248 aa17.52■□□□□ 0.4
LDB3-208ENST00000623007 NIF3L1Q9GZT8 377 aa17.52■□□□□ 0.4
LDB3-208ENST00000623007 AP5M1Q9H0R1 490 aa17.52■□□□□ 0.4
LDB3-208ENST00000623007 THAP2Q9H0W7 228 aa17.52■□□□□ 0.4
LDB3-208ENST00000623007 GNEQ9Y223 722 aaKnown RBP17.52■□□□□ 0.4
LDB3-208ENST00000623007 SMIM35A0A1B0GVV1 85 aa17.52■□□□□ 0.39
LDB3-208ENST00000623007 PGRMC1O00264 195 aaKnown RBP17.52■□□□□ 0.39
LDB3-208ENST00000623007 KCNK3O14649 394 aa17.52■□□□□ 0.39
LDB3-208ENST00000623007 EDN1P05305 212 aa17.52■□□□□ 0.39
LDB3-208ENST00000623007 RHOXF2BP0C7M4 288 aa17.52■□□□□ 0.39
LDB3-208ENST00000623007 GNAT1P11488 350 aa17.52■□□□□ 0.39
LDB3-208ENST00000623007 HARSP12081 509 aaKnown RBP17.52■□□□□ 0.39
LDB3-208ENST00000623007 CHRNB2P17787 502 aa17.52■□□□□ 0.39
LDB3-208ENST00000623007 AXLP30530 894 aa17.52■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms