RNA–Protein interactions for RNA: ENST00000622645.4

TP53-227, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,653 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-227ENST00000622645 IFFO1Q0D2I5 559 aa12.81□□□□□ -0.36
TP53-227ENST00000622645 PSMD6Q15008 389 aa12.81□□□□□ -0.36
TP53-227ENST00000622645 UBAP2Q5T6F2 1119 aaKnown RBP12.81□□□□□ -0.36
TP53-227ENST00000622645 DAB2IPQ5VWQ8 1189 aa12.81□□□□□ -0.36
TP53-227ENST00000622645 SCARA3Q6AZY7 606 aa12.81□□□□□ -0.36
TP53-227ENST00000622645 APOBEC3FQ8IUX4 373 aaKnown RBP12.81□□□□□ -0.36
TP53-227ENST00000622645 TARS2Q9BW92 718 aaKnown RBP12.81□□□□□ -0.36
TP53-227ENST00000622645 EPN3Q9H201 632 aa12.81□□□□□ -0.36
TP53-227ENST00000622645 AFG3L2Q9Y4W6 797 aa12.81□□□□□ -0.36
TP53-227ENST00000622645 MAFBQ9Y5Q3 323 aaPredicted RBP12.81□□□□□ -0.36
TP53-227ENST00000622645 K7ERI5 159 aa12.81□□□□□ -0.36
TP53-227ENST00000622645 ZC3H11AO75152 810 aaKnown RBP eCLIP12.81□□□□□ -0.36
TP53-227ENST00000622645 STAM2O75886 525 aa12.81□□□□□ -0.36
TP53-227ENST00000622645 ERLIN2O94905 339 aa12.81□□□□□ -0.36
TP53-227ENST00000622645 EDN1P05305 212 aa12.81□□□□□ -0.36
TP53-227ENST00000622645 TMOD1P28289 359 aa12.81□□□□□ -0.36
TP53-227ENST00000622645 MAPK4P31152 587 aa12.81□□□□□ -0.36
TP53-227ENST00000622645 PIK3CAP42336 1068 aa12.81□□□□□ -0.36
TP53-227ENST00000622645 PMS2P54278 862 aa12.81□□□□□ -0.36
TP53-227ENST00000622645 CORO7P57737 925 aa12.81□□□□□ -0.36
TP53-227ENST00000622645 MAGOHP61326 146 aaKnown RBP12.81□□□□□ -0.36
TP53-227ENST00000622645 CLDN10P78369 228 aa12.81□□□□□ -0.36
TP53-227ENST00000622645 PTGISQ16647 500 aa12.81□□□□□ -0.36
TP53-227ENST00000622645 WDR44Q5JSH3 913 aa12.81□□□□□ -0.36
TP53-227ENST00000622645 ENOSF1Q7L5Y1 443 aa12.81□□□□□ -0.36
TP53-227ENST00000622645 MCOLN2Q8IZK6 566 aa12.81□□□□□ -0.36
TP53-227ENST00000622645 CYFIP2Q96F07 1278 aa12.81□□□□□ -0.36
TP53-227ENST00000622645 PORCNQ9H237 461 aa12.81□□□□□ -0.36
TP53-227ENST00000622645 DHX33Q9H6R0 707 aaKnown RBP12.81□□□□□ -0.36
TP53-227ENST00000622645 FBXO40Q9UH90 709 aa12.81□□□□□ -0.36
TP53-227ENST00000622645 PCDHB2Q9Y5E7 798 aa12.81□□□□□ -0.36
TP53-227ENST00000622645 MYPNQ86TC9 1320 aa12.81□□□□□ -0.36
TP53-227ENST00000622645 H0YCG3 227 aa12.8□□□□□ -0.36
TP53-227ENST00000622645 VNN1O95497 513 aa12.8□□□□□ -0.36
TP53-227ENST00000622645 GGPS1O95749 300 aa12.8□□□□□ -0.36
TP53-227ENST00000622645 COILP38432 576 aaPredicted RBP12.8□□□□□ -0.36
TP53-227ENST00000622645 HIRAP54198 1017 aaPredicted RBP12.8□□□□□ -0.36
TP53-227ENST00000622645 DEPTORQ8TB45 409 aa12.8□□□□□ -0.36
TP53-227ENST00000622645 C1orf54Q8WWF1 131 aa12.8□□□□□ -0.36
TP53-227ENST00000622645 FAM107BQ9H098 131 aa12.8□□□□□ -0.36
TP53-227ENST00000622645 APOBEC3GQ9HC16 384 aaKnown RBP12.8□□□□□ -0.36
TP53-227ENST00000622645 PPANQ9NQ55 473 aaKnown RBP12.8□□□□□ -0.36
TP53-227ENST00000622645 RBAKQ9NYW8 714 aaPredicted RBP12.8□□□□□ -0.36
TP53-227ENST00000622645 SLC12A6Q9UHW9 1150 aa12.8□□□□□ -0.36
TP53-227ENST00000622645 MTUS1Q9ULD2 1270 aa12.8□□□□□ -0.36
TP53-227ENST00000622645 PODXLO00592 558 aa12.8□□□□□ -0.36
TP53-227ENST00000622645 ATG7O95352 703 aa12.8□□□□□ -0.36
TP53-227ENST00000622645 HARSP12081 509 aaKnown RBP12.8□□□□□ -0.36
TP53-227ENST00000622645 CYP1B1Q16678 543 aa12.8□□□□□ -0.36
TP53-227ENST00000622645 TREML2Q5T2D2 321 aa12.8□□□□□ -0.36
TP53-227ENST00000622645 PASD1Q8IV76 773 aa12.8□□□□□ -0.36
TP53-227ENST00000622645 ARFGAP2Q8N6H7 521 aa12.8□□□□□ -0.36
TP53-227ENST00000622645 CNKSR2Q8WXI2 1034 aa12.8□□□□□ -0.36
TP53-227ENST00000622645 SLC7A3Q8WY07 619 aa12.8□□□□□ -0.36
TP53-227ENST00000622645 RNF25Q96BH1 459 aaPredicted RBP12.8□□□□□ -0.36
TP53-227ENST00000622645 PABPC3Q9H361 631 aaKnown RBP12.8□□□□□ -0.36
TP53-227ENST00000622645 SEMA4AQ9H3S1 761 aa12.8□□□□□ -0.36
TP53-227ENST00000622645 KIAA1586Q9HCI6 787 aa12.8□□□□□ -0.36
TP53-227ENST00000622645 STYXL1Q9Y6J8 313 aa12.8□□□□□ -0.36
TP53-227ENST00000622645 FAM169AQ9Y6X4 670 aa12.8□□□□□ -0.36
TP53-227ENST00000622645 MROH7Q68CQ1 1323 aa12.8□□□□□ -0.36
TP53-227ENST00000622645 DRP2Q13474 957 aa12.79□□□□□ -0.36
TP53-227ENST00000622645 SNX1Q13596 522 aa12.79□□□□□ -0.36
TP53-227ENST00000622645 SLC29A2Q14542 456 aa12.79□□□□□ -0.36
TP53-227ENST00000622645 UHMK1Q8TAS1 419 aaKnown RBP12.79□□□□□ -0.36
TP53-227ENST00000622645 MSTO1Q9BUK6 570 aa12.79□□□□□ -0.36
TP53-227ENST00000622645 ARID2Q68CP9 1835 aa12.79□□□□□ -0.36
TP53-227ENST00000622645 ZNFX1Q9P2E3 1918 aaKnown RBP12.79□□□□□ -0.36
TP53-227ENST00000622645 TTLL13PA6NNM8 815 aa12.79□□□□□ -0.36
TP53-227ENST00000622645 E7EVH7 732 aa12.79□□□□□ -0.36
TP53-227ENST00000622645 CAND2O75155 1236 aa12.79□□□□□ -0.36
TP53-227ENST00000622645 ACO1P21399 889 aaKnown RBP12.79□□□□□ -0.36
TP53-227ENST00000622645 ARL2P36404 184 aa12.79□□□□□ -0.36
TP53-227ENST00000622645 NAMPTP43490 491 aa12.79□□□□□ -0.36
TP53-227ENST00000622645 NSFP46459 744 aaKnown RBP12.79□□□□□ -0.36
TP53-227ENST00000622645 SLC20A2Q08357 652 aa12.79□□□□□ -0.36
TP53-227ENST00000622645 AGBL2Q5U5Z8 902 aa12.79□□□□□ -0.36
TP53-227ENST00000622645 TMEM270Q6UE05 265 aa12.79□□□□□ -0.36
TP53-227ENST00000622645 EEPD1Q7L9B9 569 aa12.79□□□□□ -0.36
TP53-227ENST00000622645 OR5B17Q8NGF7 314 aa12.79□□□□□ -0.36
TP53-227ENST00000622645 CCT8L2Q96SF2 557 aa12.79□□□□□ -0.36
TP53-227ENST00000622645 CEP89Q96ST8 783 aa12.79□□□□□ -0.36
TP53-227ENST00000622645 PCYT2Q99447 389 aa12.79□□□□□ -0.36
TP53-227ENST00000622645 HERPUD2Q9BSE4 406 aa12.79□□□□□ -0.36
TP53-227ENST00000622645 UMODL1Q5DID0 1318 aa12.79□□□□□ -0.36
TP53-227ENST00000622645 SSC5DA1L4H1 1573 aa12.79□□□□□ -0.36
TP53-227ENST00000622645 GSTTP1A0A1W2PQM5 241 aa12.78□□□□□ -0.36
TP53-227ENST00000622645 TLDC2A0PJX2 215 aa12.78□□□□□ -0.36
TP53-227ENST00000622645 O00370 1275 aa12.78□□□□□ -0.36
TP53-227ENST00000622645 UBA1P22314 1058 aaKnown RBP12.78□□□□□ -0.36
TP53-227ENST00000622645 ICAM3P32942 547 aa12.78□□□□□ -0.36
TP53-227ENST00000622645 ALDH5A1P51649 535 aaPredicted RBP12.78□□□□□ -0.36
TP53-227ENST00000622645 PPP2R2AP63151 447 aa12.78□□□□□ -0.36
TP53-227ENST00000622645 ENPEPQ07075 957 aa12.78□□□□□ -0.36
TP53-227ENST00000622645 NLRP14Q86W24 1093 aa12.78□□□□□ -0.36
TP53-227ENST00000622645 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.78□□□□□ -0.367e-7■■□□□ 13
TP53-227ENST00000622645 MYCBPAPQ8TBZ2 947 aa12.78□□□□□ -0.36
TP53-227ENST00000622645 ATG4AQ8WYN0 398 aa12.78□□□□□ -0.36
TP53-227ENST00000622645 C11orf70Q9BRQ4 267 aa12.78□□□□□ -0.36
TP53-227ENST00000622645 MTFR1LQ9H019 292 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms