RNA–Protein interactions for RNA: ENST00000622629.4

MSH6-215, Transcript of mutS homolog 6, humanhuman

TSL 5 BASIC

Gene MSH6, Length 4,324 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-215ENST00000622629 EPS8L3Q8TE67 593 aaKnown RBP13.64□□□□□ -0.23
MSH6-215ENST00000622629 ATP8B4Q8TF62 1192 aa13.64□□□□□ -0.23
MSH6-215ENST00000622629 RBM15Q96T37 977 aaKnown RBP eCLIP13.64□□□□□ -0.238e-10■■□□□ 12.9
MSH6-215ENST00000622629 TIPINQ9BVW5 301 aa13.64□□□□□ -0.23
MSH6-215ENST00000622629 IP6K2Q9UHH9 426 aa13.64□□□□□ -0.23
MSH6-215ENST00000622629 A6NJR5 290 aa13.64□□□□□ -0.23
MSH6-215ENST00000622629 SNHG28P0DPA3 235 aa13.64□□□□□ -0.23
MSH6-215ENST00000622629 RALAP11233 206 aa13.64□□□□□ -0.23
MSH6-215ENST00000622629 IRX4P78413 519 aa13.64□□□□□ -0.23
MSH6-215ENST00000622629 IRF2BP2Q7Z5L9 587 aa13.64□□□□□ -0.23
MSH6-215ENST00000622629 NLRP7Q8WX94 980 aa13.64□□□□□ -0.23
MSH6-215ENST00000622629 WDR18Q9BV38 432 aa13.64□□□□□ -0.23
MSH6-215ENST00000622629 MIS12Q9H081 205 aa13.64□□□□□ -0.23
MSH6-215ENST00000622629 SEMA4AQ9H3S1 761 aa13.64□□□□□ -0.23
MSH6-215ENST00000622629 HAUS2Q9NVX0 235 aa13.64□□□□□ -0.23
MSH6-215ENST00000622629 M0R2N6 131 aa13.64□□□□□ -0.23
MSH6-215ENST00000622629 CAPN9O14815 690 aa13.64□□□□□ -0.23
MSH6-215ENST00000622629 STAMBPO95630 424 aa13.64□□□□□ -0.23
MSH6-215ENST00000622629 STAT5BP51692 787 aa13.64□□□□□ -0.23
MSH6-215ENST00000622629 DLG4P78352 724 aa13.64□□□□□ -0.23
MSH6-215ENST00000622629 RCN2Q14257 317 aa13.64□□□□□ -0.23
MSH6-215ENST00000622629 DUOXA2Q1HG44 320 aa13.64□□□□□ -0.23
MSH6-215ENST00000622629 TSNAXIP1Q2TAA8 658 aa13.64□□□□□ -0.23
MSH6-215ENST00000622629 P3H1Q32P28 736 aa13.64□□□□□ -0.23
MSH6-215ENST00000622629 TTMPQ5BVD1 217 aa13.64□□□□□ -0.23
MSH6-215ENST00000622629 AADACL2Q6P093 401 aa13.64□□□□□ -0.23
MSH6-215ENST00000622629 SV2AQ7L0J3 742 aa13.64□□□□□ -0.23
MSH6-215ENST00000622629 ANKMY2Q8IV38 441 aa13.64□□□□□ -0.23
MSH6-215ENST00000622629 LMNTD2Q8IXW0 634 aa13.64□□□□□ -0.23
MSH6-215ENST00000622629 ATP2A3Q93084 1043 aa13.64□□□□□ -0.23
MSH6-215ENST00000622629 DEFB129Q9H1M3 183 aa13.64□□□□□ -0.23
MSH6-215ENST00000622629 KLC4Q9NSK0 619 aa13.64□□□□□ -0.23
MSH6-215ENST00000622629 PARVAQ9NVD7 372 aa13.64□□□□□ -0.23
MSH6-215ENST00000622629 RNF181Q9P0P0 153 aa13.64□□□□□ -0.23
MSH6-215ENST00000622629 CNOT7Q9UIV1 285 aaKnown RBP13.64□□□□□ -0.23
MSH6-215ENST00000622629 MAGED2Q9UNF1 606 aaPredicted RBP13.64□□□□□ -0.23
MSH6-215ENST00000622629 COMMD10Q9Y6G5 202 aa13.64□□□□□ -0.23
MSH6-215ENST00000622629 ROBO3Q96MS0 1386 aa13.64□□□□□ -0.23
MSH6-215ENST00000622629 A0A0A6YYK5 440 aaPredicted RBP13.63□□□□□ -0.23
MSH6-215ENST00000622629 NOL4O94818 638 aa13.63□□□□□ -0.23
MSH6-215ENST00000622629 RRM1P23921 792 aa13.63□□□□□ -0.23
MSH6-215ENST00000622629 HSPA9P38646 679 aaKnown RBP13.63□□□□□ -0.23
MSH6-215ENST00000622629 ITGA8P53708 1063 aa13.63□□□□□ -0.23
MSH6-215ENST00000622629 CDR2Q01850 454 aa13.63□□□□□ -0.23
MSH6-215ENST00000622629 WDR72Q3MJ13 1102 aa13.63□□□□□ -0.23
MSH6-215ENST00000622629 RAPGEF5Q92565 580 aa13.63□□□□□ -0.23
MSH6-215ENST00000622629 TTC17Q96AE7 1141 aa13.63□□□□□ -0.23
MSH6-215ENST00000622629 ACSF2Q96CM8 615 aaPredicted RBP13.63□□□□□ -0.23
MSH6-215ENST00000622629 CFAP36Q96G28 342 aa13.63□□□□□ -0.23
MSH6-215ENST00000622629 MTFR1LQ9H019 292 aa13.63□□□□□ -0.23
MSH6-215ENST00000622629 MYOZ2Q9NPC6 264 aa13.63□□□□□ -0.23
MSH6-215ENST00000622629 GDF3Q9NR23 364 aa13.63□□□□□ -0.23
MSH6-215ENST00000622629 ANKEF1Q9NU02 776 aa13.63□□□□□ -0.23
MSH6-215ENST00000622629 DCTN4Q9UJW0 460 aa13.63□□□□□ -0.23
MSH6-215ENST00000622629 PIK3R2O00459 728 aa13.63□□□□□ -0.23
MSH6-215ENST00000622629 MYBL1P10243 752 aa13.63□□□□□ -0.23
MSH6-215ENST00000622629 CIITAP33076 1130 aa13.63□□□□□ -0.23
MSH6-215ENST00000622629 NOP14P78316 857 aaKnown RBP13.63□□□□□ -0.23
MSH6-215ENST00000622629 EMC2Q15006 297 aa13.63□□□□□ -0.23
MSH6-215ENST00000622629 COBLL1Q53SF7 1204 aa13.63□□□□□ -0.23
MSH6-215ENST00000622629 TRIM72Q6ZMU5 477 aa13.63□□□□□ -0.23
MSH6-215ENST00000622629 SYTL5Q8TDW5 730 aaPredicted RBP13.63□□□□□ -0.23
MSH6-215ENST00000622629 KRT35Q92764 455 aa13.63□□□□□ -0.23
MSH6-215ENST00000622629 INPP4AQ96PE3 977 aaPredicted RBP13.63□□□□□ -0.23
MSH6-215ENST00000622629 TRAIPQ9BWF2 469 aa13.63□□□□□ -0.23
MSH6-215ENST00000622629 A0A0G2JND7 137 aa13.63□□□□□ -0.23
MSH6-215ENST00000622629 TMEM120BA0PK00 339 aa13.63□□□□□ -0.23
MSH6-215ENST00000622629 NKRFO15226 690 aaKnown RBP eCLIP13.63□□□□□ -0.23
MSH6-215ENST00000622629 WEE2P0C1S8 567 aa13.63□□□□□ -0.23
MSH6-215ENST00000622629 ITIH2P19823 946 aa13.63□□□□□ -0.23
MSH6-215ENST00000622629 ARL4CP56559 192 aa13.63□□□□□ -0.23
MSH6-215ENST00000622629 SARNPP82979 210 aaKnown RBP13.63□□□□□ -0.23
MSH6-215ENST00000622629 SURF1Q15526 300 aa13.63□□□□□ -0.23
MSH6-215ENST00000622629 ARHGAP24Q8N264 748 aa13.63□□□□□ -0.23
MSH6-215ENST00000622629 RNF169Q8NCN4 708 aa13.63□□□□□ -0.23
MSH6-215ENST00000622629 ZNF280CQ8ND82 737 aa13.63□□□□□ -0.23
MSH6-215ENST00000622629 TATDN2Q93075 761 aa13.63□□□□□ -0.23
MSH6-215ENST00000622629 ZKSCAN4Q969J2 545 aaPredicted RBP13.63□□□□□ -0.23
MSH6-215ENST00000622629 MRPL4Q9BYD3 311 aaKnown RBP13.63□□□□□ -0.23
MSH6-215ENST00000622629 FGFR1OP2Q9NVK5 253 aa13.63□□□□□ -0.23
MSH6-215ENST00000622629 PARP4Q9UKK3 1724 aaKnown RBP13.63□□□□□ -0.23
MSH6-215ENST00000622629 ZBED1O96006 694 aa13.63□□□□□ -0.23
MSH6-215ENST00000622629 FDX1P10109 184 aa13.63□□□□□ -0.23
MSH6-215ENST00000622629 SAT1P21673 171 aa13.63□□□□□ -0.23
MSH6-215ENST00000622629 SLC1A1P43005 524 aa13.63□□□□□ -0.23
MSH6-215ENST00000622629 PPP3CAQ08209 521 aa13.63□□□□□ -0.23
MSH6-215ENST00000622629 ACAD10Q6JQN1 1059 aa13.63□□□□□ -0.23
MSH6-215ENST00000622629 ZC3H18Q86VM9 953 aaKnown RBP13.63□□□□□ -0.23
MSH6-215ENST00000622629 CCNYQ8ND76 341 aa13.63□□□□□ -0.23
MSH6-215ENST00000622629 LRRC15Q8TF66 581 aa13.63□□□□□ -0.23
MSH6-215ENST00000622629 SLC5A5Q92911 643 aa13.63□□□□□ -0.23
MSH6-215ENST00000622629 MCEEQ96PE7 176 aa13.63□□□□□ -0.23
MSH6-215ENST00000622629 GLIS2Q9BZE0 524 aaPredicted RBP13.63□□□□□ -0.23
MSH6-215ENST00000622629 CYP3A7-CYP3A51PA0A087WV96 503 aa13.62□□□□□ -0.23
MSH6-215ENST00000622629 GOLGA8RI6L899 631 aa13.62□□□□□ -0.23
MSH6-215ENST00000622629 TGFB1I1O43294 461 aa13.62□□□□□ -0.23
MSH6-215ENST00000622629 ONECUT3O60422 494 aaPredicted RBP13.62□□□□□ -0.23
MSH6-215ENST00000622629 FECHP22830 423 aa13.62□□□□□ -0.23
MSH6-215ENST00000622629 CYP3A7P24462 503 aa13.62□□□□□ -0.23
MSH6-215ENST00000622629 GPC3P51654 580 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms